Contig 014106:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038F14Sequence667012107 (7)ref|XP_011084438.1|5e-35PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Sesamum in928014106 (2)ref|XP_009757984.1|5e-116PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana
JMSF046N21Sequence735022240ref|XP_011084438.1|1e-31PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Sesamum in721014106 (2)ref|XP_009757984.1|1e-95PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana

Alignment

This contig is upended


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rJMSF038F14+                             ATTGAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTCATTA
                      ____________________________________________________________
consensus                                ATTGAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTCATTA
 
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rJMSF038F14+          AGAATTCAAATGGCTGCAACCTTGCTGTTGATATATGGAGTCTTGGGTGCACAGTCTTAG
                      ____________________________________________________________
consensus             AGAATTCAAATGGCTGCAACCTTGCTGTTGATATATGGAGTCTTGGGTGCACAGTCTTAG
 
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rJMSF038F14+          AAATGGCCACTTCAAAACCTCCTTGGAGCCAGTATGAAGGGGTTTGCTGCAATGTTTAAG
                      ____________________________________________________________
consensus             AAATGGCCACTTCAAAACCTCCTTGGAGCCAGTATGAAGGGGTTTGCTGCAATGTTTAAG
 
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rJMSF038F14+          ATTGGCAATAGTAAAGAACTTCCAACAATTCCGGAACACCTATCAAACGAAGGGAAGGAT
rJMSF046N21+                                                                     T
                      ____________________________________________________________
consensus             ATTGGCAATAGTAAAGAACTTCCAACAATTCCGGAACACCTATCAAACGAAGGGAAGGAT
 
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rJMSF038F14+          TTTATCATGAAATGCTTGCAGCGTGATCCACT-CAATCGTCCTACTGCTGCTCAGCTATT
rJMSF046N21+          TTTATCATGAAATGCTTGCAGCGTGATCCACTCCAATCGTCCTACTGCTGCTCAGCTATT
                      ____________________________________________________________
consensus             TTTATCATGAAATGCTTGCAGCGTGATCCACTCCAATCGTCCTACTGCTGCTCAGCTATT
 
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rJMSF038F14+          AGACCATCC-TTTTGTAAAAAATGCTGCCTCTCCTGAAAAGCCTACTATTGTCCAATCAC
rJMSF046N21+          AGACCATCCTTTTTGTAAAAAATGCTGCCTCTCCTGAAAAGCCTACTATTGTCCAATCAC
                      ____________________________________________________________
consensus             AGACCATCCTTTTTGTAAAAAATGCTGCCTCTCCTGAAAAGCCTACTATTGTCCAATCAC
 
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rJMSF038F14+          AACCTGATCCTCCATTTACCAGCACAAATGGCATCACATCTCAGGGCATTGCGCATAGAA
rJMSF046N21+          AACCTGATCCTCCATTTACCAGCACAAATGGCATCACATCTCAGGGCATTGCGCATAGAA
                      ____________________________________________________________
consensus             AACCTGATCCTCCATTTACCAGCACAAATGGCATCACATCTCAGGGCATTGCGCATAGAA
 
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rJMSF038F14+          GAAATATTCCTAATTTTGAACCAGAAAGACTTGCTATCCACTCATCAAGAGTATCAAAAT
rJMSF046N21+          GAAATATTCCTAATTTTGAACCAGAAAGACTTGCTATCCACTCATCAAGAGTATCAAAAT
                      ____________________________________________________________
consensus             GAAATATTCCTAATTTTGAACCAGAAAGACTTGCTATCCACTCATCAAGAGTATCAAAAT
 
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rJMSF038F14+          CTACTTTCCACTACAGTGATATCCACATTCCAAGGAATGTTTCTTGCCCAGTCTCTCCAA
rJMSF046N21+          CTACTTTCCACTACAGTGATATCCACATTCCAAGGAATGTTTCTTGCCCAGTCTCTCCAA
                      ____________________________________________________________
consensus             CTACTTTCCACTACAGTGATATCCACATTCCAAGGAATGTTTCTTGCCCAGTCTCTCCAA
 
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rJMSF038F14+          TGGGGAGCCCCCTTTTACACCCGAGGTCTCCTCAACACCTAAATGGGAGGATGTCTCCAT
rJMSF046N21+          TGGGGAGCCCCCTTTTACACCCGAGGTCTCCTCAACACCTAAATGGGAGGATGTCTCCAT
                      ____________________________________________________________
consensus             TGGGGAGCCCCCTTTTACACCCGAGGTCTCCTCAACACCTAAATGGGAGGATGTCTCCAT
 
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rJMSF038F14+          CGCCCATATCAAGTCCTCTCAACACATCGGGCTCATCCACACCACTCTCTGGTGGGTCTG
rJMSF046N21+          CGCCCATATCAAGTCCTCTCAACACATCGGGCTCATCCACACCACTCTCTGGTGGGGCTG
                      ____________________________________________________________
consensus             CGCCCATATCAAGTCCTCTCAACACATCGGGCTCATCCACACCACTCTCTGGTGGGTCTG
 
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rJMSF038F14+          GTGCAATCCCATTTCATCACTTCAATCACTCGGTCCACTTGCAAGTTAATGGCCCTTATT
rJMSF046N21+          GTGCAATCCCATTTCATCACTTCAATCACTCGGTCCACTTGCAAGTTAATGGCCCTTATT
                      ____________________________________________________________
consensus             GTGCAATCCCATTTCATCACTTCAATCACTCGGTCCACTTGCAAGTTAATGGCCCTTATT
 
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rJMSF038F14+          GGGATCCTGATGTCTTTCGAGGGATGCAATCAGGATCTAGTGTCTTCCGTGACATGACAC
rJMSF046N21+          GGGATCCTGATGTCTTTCGAGGGATGCAATCAGGATCTAGTGTCTTCCGTGACATGACAC
                      ____________________________________________________________
consensus             GGGATCCTGATGTCTTTCGAGGGATGCAATCAGGATCTAGTGTCTTCCGTGACATGACAC
 
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rJMSF038F14+          CGTGTGAAAATGATGCACTTGGGAAGCAGTTCGGAAGGCTCACCGGTGTAGAAACTAATG
rJMSF046N21+          CGTGTGAAAATGATGCACTTGGGAAGCAGTTCGGAAGGCTCACCGGTGTAGAAACTAATG
                      ____________________________________________________________
consensus             CGTGTGAAAATGATGCACTTGGGAAGCAGTTCGGAAGGCTCACCGGTGTAGAAACTAATG
 
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rJMSF038F14+          ATGGGCAGTCGGTCTTGGCTAATCGTGTTACTCAGCAACTTTTAAGGGATCACGACAAAC
rJMSF046N21+          ATGGGCAGTCGGTCTTGGCTAATCGTGTTACTCAGCAACTTTTAAGGGATCACGACAAAC
                      ____________________________________________________________
consensus             ATGGGCAGTCGGTCTTGGCTAATCGTGTTACTCAGCAACTTTTAAGGGATCACGACAAAC
 
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rJMSF038F14+          CAGTCCCATCACTAGATCTGAATCCTTGCCCCCCCT                        
rJMSF046N21+          CAGTCCCATCACTAGATCTGAATCCTTGCCCCCCCTTGGCAGGTCGGACCAGGAGGGACA
                      ____________________________________________________________
consensus             CAGTCCCATCACTAGATCTGAATCCTTGCCCCCCCTTGGCAGGTCGGACCAGGAGGGACA