Contig 014105:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049E20+                                                                  AAAT
rJMSF046K01+                               AGAGGAANGTATATGCATTGCTCAAGAATCAAGCNAAAT
                      ____________________________________________________________
consensus                                  AGAGGAANGTATATGCATTGCTCAAGAATCAAGCNAAAT
 
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rJMSF049E20+          CTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTCTGCACTTCATCAAGTCGT
rJMSF046K01+          NTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTNTGCACTTCATCAAGTCGT
                      ____________________________________________________________
consensus             CTGATGATGTACTCAAAGCGGCTTTCCATGCACATATTCTTCTGCACTTCATCAAGTCGT
 
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rJMSF049E20+          CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
rJMSF046K01+          CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
                      ____________________________________________________________
consensus             CCAATTATCAGTCTTCGTCCGGGAAAGAAATGCAGGGTGATCTCTCTTTTTCCTTGGCAT
 
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rJMSF049E20+          CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
rJMSF046K01+          CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
                      ____________________________________________________________
consensus             CCAGTGCTGATCTTCATGCTCATGTTGCAGAATCTTATAAAATGGTCTCAGCTCTGTATG
 
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rJMSF049E20+          CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
rJMSF046K01+          CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
                      ____________________________________________________________
consensus             CACCTTTCAAGAGTAAGGCCAAAGAACAGGGGTGGGTAATGTCAGAATCACTGCTTAATC
 
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rJMSF049E20+          CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
rJMSF046K01+          CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
                      ____________________________________________________________
consensus             CTGGTCGAGCTCGCCTATGTGACTTGGGTGAATAAGAAGATGTTTTCTGCCGTTAATATA
 
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rJMSF049E20+          CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
rJMSF046K01+          CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
                      ____________________________________________________________
consensus             CTTGTGTGAACATCTGATGTTGGATATAAAAATTTGATAAGCCTGCTTAGACAAGTAACA
 
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rJMSF049E20+          CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCACAAAAATAAAAAACAAGA
rJMSF046K01+          CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCCCAAAAATAAAAAACAAGA
                      ____________________________________________________________
consensus             CTCATTTGCACAGTAACAAGATTGTCATGCCTTCTCCCCCCCCAAAAATAAAAAACAAGA
 
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rJMSF049E20+          TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
rJMSF046K01+          TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
                      ____________________________________________________________
consensus             TCATCCATCGTGCCTTGAGTGTGTATCACGCAGAGCTTCCTGTCATGGCTTGCACAAACT
 
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rJMSF049E20+          ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
rJMSF046K01+          ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
                      ____________________________________________________________
consensus             ACAGAATGCGTAAGAGCTGTAAACAGAGATGCAAGAAGATTCTACCTGTGTATGAAAATA
 
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rJMSF049E20+          GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
rJMSF046K01+          GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
                      ____________________________________________________________
consensus             GTAGCTTGCATTTCCGCAATGTAAGCAAGAAATAACCTCTCCTATCAGAGTTGTCAGCGT
 
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rJMSF049E20+          TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
rJMSF046K01+          TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
                      ____________________________________________________________
consensus             TCGTGTAAATTTTGTTAAATTTTTTTCATGTTTGTTTTTCTATTAGGTGCTTTTGGCTGT
 
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rJMSF049E20+          TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAACCATGTATGCTTTTATTATGATT
rJMSF046K01+          TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAA-CATGTATGCTTTTATTATGATT
                      ____________________________________________________________
consensus             TGTTAACAGTATGAGGTGCATAATGTTTAGAGCATAACCATGTATGCTTTTATTATGATT
 
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rJMSF049E20+          TGCGAGTGTGTTATGTAAACCCCTA                                   
rJMSF046K01+          TGCGAGTGTGTTATGTAAACCCCTATTAGCATAGTGTATATAGCATGATTTATATGCTTT
                      ____________________________________________________________
consensus             TGCGAGTGTGTTATGTAAACCCCTATTAGCATAGTGTATATAGCATGATTTATATGCTTT