Contig 014102:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002O11Sequence249023102726014102 (2)ref|XP_006341706.1|8e-42PREDICTED: protein IFH1-like [Solanum tuberosum]
JMSF045E08Sequence788007752 (44)ref|XP_011096359.1|3e-150PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Sesamum indi756014102 (2)ref|XP_004235792.1|208PREDICTED: uncharacterized protein LOC101250490 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF002O11+                                                  AAAAATAGAAAGGNGAAATT
rJMSF045E08+                                  TGATGCATGGCACCCAAAAAATAGAAAGGTGAAATT
                      ____________________________________________________________
consensus                                     TGATGCATGGCACCCAAAAAATAGAAAGGTGAAATT
 
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rJMSF002O11+          GGCTGTTACAGTCAAAGAACTTGGCCTATCTAAACATCAATTTCGCCGTTTGAGAGAATT
rJMSF045E08+          GGCTGTTACAGTCAAAGAACTTGGCCTATCTAAACATCAATTTCGCCGTTTGAGAGAATT
                      ____________________________________________________________
consensus             GGCTGTTACAGTCAAAGAACTTGGCCTATCTAAACATCAATTTCGCCGTTTGAGAGAATT
 
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rJMSF002O11+          GGTTGGAAAACGTTACCATCCTGGGAGAGATGAACTTACCATCAC-AGTGAAAGGTTTGA
rJMSF045E08+          GGTTGGAAAACGTTACCATCCTGGGAGAGATGAACTTACCATCACAAGTGAAAGGTTTGA
                      ____________________________________________________________
consensus             GGTTGGAAAACGTTACCATCCTGGGAGAGATGAACTTACCATCACAAGTGAAAGGTTTGA
 
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rJMSF002O11+          GGATCGTGAGGAGAATAGAAAGGATTGCCTTAGGACTCTATTATCTTTGATTGAGGAGGC
rJMSF045E08+          GGATCGTGAGGAGAATAGAAAGGATTGCCTTAGGACTCTATTATCTTTGATTGAGGAGGC
                      ____________________________________________________________
consensus             GGATCGTGAGGAGAATAGAAAGGATTGCCTTAGGACTCTATTATCTTTGATTGAGGAGGC
 
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rJMSF002O11+          TGGAAAAGCAAATAAAATTGTGGAGGATGCTCGCACTGCGTATGCCAAGCAGAGACTTAA
rJMSF045E08+          TGGAAAAGCAAATAAAATTGTGGAGGATGCTCGCACTGCGTATGCCAAGCAGAGACTTAA
                      ____________________________________________________________
consensus             TGGAAAAGCAAATAAAATTGTGGAGGATGCTCGCACTGCGTATGCCAAGCAGAGACTTAA
 
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rJMSF002O11+          AGCAAATCCAAAATTCATGGCAAGGTTACATGCAAAGACTGCTAAGATGAGAGAATCTAC
rJMSF045E08+          AGCAAATCCAAAATTCATGGCAAGGTTACATGCAAAGACTGCTAAGATGAGAGAATCTAC
                      ____________________________________________________________
consensus             AGCAAATCCAAAATTCATGGCAAGGTTACATGCAAAGACTGCTAAGATGAGAGAATCTAC
 
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rJMSF002O11+          TACCCCCTTGCCTGCATGATACGTCTACAGATGATGTACCCTGGAAATATCTAAAAACTC
rJMSF045E08+          TACCCCCTTGCCTGCATGATACGTCTACAGATGATGTACCCTGGAAATATCTAAAAACTC
                      ____________________________________________________________
consensus             TACCCCCTTGCCTGCATGATACGTCTACAGATGATGTACCCTGGAAATATCTAAAAACTC
 
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rJMSF002O11+          AAGCTGAAAAAATGACACCAAGTAATGCATCTTCCGGGTTTGAATTTGAGAATGATTTGG
rJMSF045E08+          AAGCTGAAAAAATGACACCAAGTAATGCATCTTCCGGGTTTGAATTTGAGAATGATTTGG
                      ____________________________________________________________
consensus             AAGCTGAAAAAATGACACCAAGTAATGCATCTTCCGGGTTTGAATTTGAGAATGATTTGG
 
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rJMSF002O11+          TTTTTGTTTATCAAGAGAACTCTGGTGTTCACCCTGGAAATTCCAAGACTGATTACTTGG
rJMSF045E08+          TTTTTGTTTATCAAGAGAACTCTGGTGTTCACCCTGGAAATTCCAAGACTGATTACTTGG
                      ____________________________________________________________
consensus             TTTTTGTTTATCAAGAGAACTCTGGTGTTCACCCTGGAAATTCCAAGACTGATTACTTGG
 
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rJMSF002O11+          CATGGATTAAAGTGGAGAAAAAAAAATAATAAAAATAATTAGTGTAGCTGGAAAACATTG
rJMSF045E08+          CATGGATTAAAGTGGAGAAAAAAAAATAATAAAAATAATTAGTGTAGCTGGAAAACATTG
                      ____________________________________________________________
consensus             CATGGATTAAAGTGGAGAAAAAAAAATAATAAAAATAATTAGTGTAGCTGGAAAACATTG
 
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rJMSF002O11+          CTATTTTGCTTTACTTCGTTTTTGGCTCTGTAGTTTTGGCAATTGTTTTTGTCAGGTCAG
rJMSF045E08+          CTATTTTGCTTTACTTCGTTTTTGGCTCTGTAGTTTTGGCAATTGTTTTTGTCAGGTCAG
                      ____________________________________________________________
consensus             CTATTTTGCTTTACTTCGTTTTTGGCTCTGTAGTTTTGGCAATTGTTTTTGTCAGGTCAG
 
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rJMSF002O11+          GTTAGTTAATGAAATGTTGAGATGTGATGCTGAATACTGTCAGCAATCAAGTATATTACC
rJMSF045E08+          GTTAGTTAATGAAATGTTGAGATGTGATGCTGAATACTGTCAGCAATCAAGTATATTACC
                      ____________________________________________________________
consensus             GTTAGTTAATGAAATGTTGAGATGTGATGCTGAATACTGTCAGCAATCAAGTATATTACC
 
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rJMSF002O11+          ATTGACATCTCATAGGTGGTTTTTATTTTCAATTCTTAGGGTGTTTT             
rJMSF045E08+          ATTGACATCTCATAGGTGGTTTTTATTTTCAATTCTTAGGGTGTTTTTGATTCCATGGGT
                      ____________________________________________________________
consensus             ATTGACATCTCATAGGTGGTTTTTATTTTCAATTCTTAGGGTGTTTTTGATTCCATGGGT