| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF028K22 | Sequence | 665 | 014093 (6) | ref|XP_011088464.1| | 1e-72 | PREDICTED: uncharacterized protein LOC105169684 isoform X2 [Sesamum indicum] | 704 | 014093 (6) | ref|XP_002306131.2| | 5e-65 | hypothetical protein POPTR_0004s16800g [Populus trichocarpa] gb|EEE86642.2| hypo |
| JMSF029G01 | Sequence | 611 | 014093 (6) | ref|XP_011088464.1| | 8e-69 | PREDICTED: uncharacterized protein LOC105169684 isoform X2 [Sesamum indicum] | 694 | 014093 (6) | ref|XP_009788267.1| | 2e-82 | PREDICTED: uncharacterized protein LOC104236100 isoform X2 [Nicotiana sylvestri |
| JMSF044C21 | Sequence | 792 | 014093 (6) | ref|XP_011088464.1| | 6e-107 | PREDICTED: uncharacterized protein LOC105169684 isoform X2 [Sesamum indicum] | 719 | 014093 (6) | ref|XP_009788266.1| | 3e-72 | PREDICTED: uncharacterized protein LOC104236100 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMSF044C21- GGGT
____________________________________________________________
consensus GGGT
. : . : . : . : . : . :
JMSF028K22- GCCTGTCTCTCCCGCCATTT
JMSF029G01- GTCGCGGGGATATGGTAGACGCCTGTCTCTCCCGCCATTT
JMSF044C21- GACCAAAGGCAAAGGATAGAGTCGCGGGGATATGGTAGACGCCTGTCTCTCCCGCCATTT
____________________________________________________________
consensus GACCAAAGGCAAAGGATAGAGTCGCGGGGATATGGTAGACGCCTGTCTCTCCCGCCATTT
. : . : . : . : . : . :
JMSF028K22- CTACCGTATCGATCAAAACCGTACTAAAATGGCGACATTCTTCGCTACCCCGTCGCCTCC
JMSF029G01- CTACCGTATCGATCAAAACCGTACTAAAATGGCGACATTCTTCGCTACCCCGTCGCCTCC
JMSF044C21- CTACCGTATCGATCAAAACCGTACTAAAATGGCGACATTCTTCGCTACCCCGTCGCCTCC
____________________________________________________________
consensus CTACCGTATCGATCAAAACCGTACTAAAATGGCGACATTCTTCGCTACCCCGTCGCCTCC
. : . : . : . : . : . :
JMSF028K22- GTCTACTCTGCACTTCCTTCGTTCATCGCCGCTGCGTTTTCCCCGTTGTTTGTGGAGTGG
JMSF029G01- GTCTACTCTGCACTTCCTTCGTTCATCGCCGCTGCGTTTTCCCCGTTGTTTGTGGAGTGG
JMSF044C21- GTCTACTCTGCACTTCCTTCGTTCATCGCCGCTGCGTTTTCCCCGTTGTTTGTGGAGTGG
____________________________________________________________
consensus GTCTACTCTGCACTTCCTTCGTTCATCGCCGCTGCGTTTTCCCCGTTGTTTGTGGAGTGG
. : . : . : . : . : . :
JMSF028K22- ACTTGTTAGGAGAGAGAAGTTGAATACGATTCCTTATAGAAATTTTGTCAAGTGGAACCG
JMSF029G01- ACTTGTTAGGAGAGAGAAGTTGAATACGATTCCTTATAGAAATTTTGTCAAGTGGAACCG
JMSF044C21- ACTTGTTAGGAGAGAGAAGTTGAATACGATTCCTTATAGAAATTTTGTCAAGTGGAACCG
____________________________________________________________
consensus ACTTGTTAGGAGAGAGAAGTTGAATACGATTCCTTATAGAAATTTTGTCAAGTGGAACCG
. : . : . : . : . : . :
JMSF028K22- GAGGAGAACTTTGATTTGTGCAGCCAATCAAGATGCTGAGAACTCATTTAGGAAGACAGT
JMSF029G01- GAGGAGAACTTTGATTTGTGCAGCCAATCAAGATGCTGAGAACTCATTTAGGAAGACAGT
JMSF044C21- GAGGAGAACTTTGATTTGTGCAGCCAATCAAGATGCTGAGAACTCATTTAGGAAGACAGT
____________________________________________________________
consensus GAGGAGAACTTTGATTTGTGCAGCCAATCAAGATGCTGAGAACTCATTTAGGAAGACAGT
. : . : . : . : . : . :
JMSF028K22- GGAAATGGACAGGCTTATAGATATGCTGAGGGCTGCAGATGATAAGGAACTTCAGAAACT
JMSF029G01- GGAAATGGACAGGCTTATAGATATGCTGAGGGCTGCAGATGATAAGGAACTTCAGAAACT
JMSF044C21- GGAAATGGACAGGCTTATAGATATGCTGAGGGCTGCAGATGATAAGGAACTTCAGAAACT
____________________________________________________________
consensus GGAAATGGACAGGCTTATAGATATGCTGAGGGCTGCAGATGATAAGGAACTTCAGAAACT
. : . : . : . : . : . :
JMSF028K22- CGTTGTGGAGAATGTCCTTTCTTTCAATGAGAGCTTTTGGATAAGACTAGCGGCTAGAGC
JMSF029G01- CGTTGTGGAGAATGTCCTTTCTTTCAATGAGAGCTTTTGGATAAGACTAGCGGCTAGAGC
JMSF044C21- CGTTGTGGAGAATGTCCTTTCTTTCAATGAGAGCTTTTGGATAAGACTAGCGGCTAGAGC
____________________________________________________________
consensus CGTTGTGGAGAATGTCCTTTCTTTCAATGAGAGCTTTTGGATAAGACTAGCGGCTAGAGC
. : . : . : . : . : . :
JMSF028K22- AGATAACTGCAAATCTGAAGATGACAAAAAAGACCTGGAAGAATTGGCATCATTCTTAAT
JMSF029G01- AGATAACTGCAAATCTGAAGATGACAAAAAAGACCTGGAAGAATTGGCATCATTCTTAAT
JMSF044C21- AGATAACTGCAAATCTGAAGATGACAAAAAAGACCTGGAAGAATTGGCATCATTCTTAAT
____________________________________________________________
consensus AGATAACTGCAAATCTGAAGATGACAAAAAAGACCTGGAAGAATTGGCATCATTCTTAAT
. : . : . : . : . : . :
JMSF028K22- GAGCTTGGTAGATAGTATTGTTCACAAGACATATGAAAAGATAGAGTCAGCTACCGATGT
JMSF029G01- GAGCTTGGTAGATAGTATTGTTCACAAGACATATGAAAAGATAGAGTCAGCTACCGATGT
JMSF044C21- GAGCTTGGTAGATAGTATTGTTCACAAGACATATGAAAAGATAGAGTCAGCTACCGATGT
____________________________________________________________
consensus GAGCTTGGTAGATAGTATTGTTCACAAGACATATGAAAAGATAGAGTCAGCTACCGATGT
. : . : . : . : . : . :
JMSF028K22- GCTCAAAGCCATCTTAAGACCTGCAGCTCAGGAAGAGGATGAAATTCCTTGGCCCCCAAG
JMSF029G01- GCTCAAAGCCATCTTAAGACCTGCAGCTCAGGAAGAGGATGAAATTCCTTGGCCCCCAAG
JMSF044C21- GCTCAAAGCCATCTTAAGACCTGCAGCTCAGGAAGAGGATGAAATTCCTTGGCCCCCAAG
____________________________________________________________
consensus GCTCAAAGCCATCTTAAGACCTGCAGCTCAGGAAGAGGATGAAATTCCTTGGCCCCCAAG
. : . : . : . : . : . :
JMSF028K22- GGATCCTGAAGCTCTCAGCCTTATGGAGAAAGAATTAAATC-AAGGGAGCAAGAAGGCCA
JMSF029G01- GGATCCTGAAGCTCTCAGCCTTATGGAGAA
JMSF044C21- GGATCCTGAAGCTCTCAGCCTTATGGAGAAAGAATTAAATCAAAGGGAGCAAGAAGGCCA
rJMSF029G01+ CTTATGGAGAAAGAATTAAATCAAAGGGAGCAAGAAGGCCA
rJMSF044C21+ A
____________________________________________________________
consensus GGATCCTGAAGCTCTCAGCCTTATGGAGAAAGAATTAAATCAAAGGGAGCAAGAAGGCCA
. : . : . : . : . : . :
JMSF028K22- ACTAGATGAAGGATTCCTGTCAGAAGT-CAATGCACAACTACGGAA
JMSF044C21- ACTAGATGAAGGATTCCTGTCAGAAGT-CAATGCACAACTACGGAATGCAAAAGAAGATG
rJMSF029G01+ ACTAGATGAAGGATTCCTGTCAGAAGT-CAATGCACAACTACGGAATGCAAAAGAAGATG
rJMSF028K22+ CTAGATGAAGGATTCCTGTCAGAAGTCCAATGCACAANTACGGAATGCAAAAGAAGATG
rJMSF044C21+ ACTAGATGAAGGATTCCTGTCAGAAGT-CAATGCACAACTACGGAATGCAAAAGAAGATG
____________________________________________________________
consensus ACTAGATGAAGGATTCCTGTCAGAAGT-CAATGCACAACTACGGAATGCAAAAGAAGATG
. : . : . : . : . : . :
JMSF044C21- GGGACAAGCCAGGGCTTGAAGCTATGCTGCAAAAAGTTTTGCAGCTCTATGCTTCTAGAG
rJMSF029G01+ GGGACAAGCCAGGGCTTGAAGCTATGCTGCAAAAAGTTTTGCAGCTCTATGCTTCTAGAG
rJMSF028K22+ GGGACAAGCCAGGGCTTGAAGCTATGCTGCAAAAAGTTTTGCAGCTCTATGCTTCTAGAG
rJMSF044C21+ GGGACAAGCCAGGGCTTGAAGCTATGCTGCAAAAAGTTTTGCAGCTCTATGCTTCTAGAG
____________________________________________________________
consensus GGGACAAGCCAGGGCTTGAAGCTATGCTGCAAAAAGTTTTGCAGCTCTATGCTTCTAGAG
. : . : . : . : . : . :
JMSF044C21- TTCTCTCTA
rJMSF029G01+ TTCTCTCTAAGCGTAGTTTTGCTAGAAAAGGGGATGAGATTTTAAAGGCTGAACAGTTTC
rJMSF028K22+ TTCTCTCTAAGCGTAGTTTTGCTAGAAAAGGGGATGAGATTTTAAAGGCTGAACAGTTTC
rJMSF044C21+ TTCTCTCTAAGCGTAGTTTTGCTAGAAAAGGGGATGAGATTTTAAAGGCTGAACAGTTTC
____________________________________________________________
consensus TTCTCTCTAAGCGTAGTTTTGCTAGAAAAGGGGATGAGATTTTAAAGGCTGAACAGTTTC
. : . : . : . : . : . :
rJMSF029G01+ TTGAGACCATAATTAAAGCTCCAGAAGAAGAATGGAATAGGCTGTTGTTAGATGGAATGA
rJMSF028K22+ TTGAGACCATAATTAAAGCTCCAGAAGAAGAATGGAATAGGCTGTTGTTAGATGGAATGA
rJMSF044C21+ TTGAGACCATAATTAAAGCTCCAGAAGAAGAATGGAATAGGCTGTTGTTAGATGGAATGA
____________________________________________________________
consensus TTGAGACCATAATTAAAGCTCCAGAAGAAGAATGGAATAGGCTGTTGTTAGATGGAATGA
. : . : . : . : . : . :
rJMSF029G01+ CTGTGGGCAAAGGTGAAATCTCACCAGAGGAATTGTATGCAGTTGTTAATAAGCGAATCG
rJMSF028K22+ CTGTGGGCAAAGGTGAAATCTCACCAGAGGAATTGTATGCAGTTGTTAATAAGCGAATCG
rJMSF044C21+ CTGTGGGCAAAGGTGAAATCTCACCAGAGGAATTGTATGCAGTTGTTAATAAGCGAATCG
____________________________________________________________
consensus CTGTGGGCAAAGGTGAAATCTCACCAGAGGAATTGTATGCAGTTGTTAATAAGCGAATCG
. : . : . : . : . : . :
rJMSF029G01+ AGCGGACATTAATCCGGACGCAAGGTGGTTCTTACGAGCAACGGGTACTTGTCGAGTATT
rJMSF028K22+ AGCGGACATTAATCCGGACGCAAGGTGGTTCTTACGAGCAACGGGTACTTGTCGAGTATT
rJMSF044C21+ AGCGGACATTAATCCGGACGCAAGGTGGTTCTTACGAGCAACGGGTACTTGTCGAGTATT
____________________________________________________________
consensus AGCGGACATTAATCCGGACGCAAGGTGGTTCTTACGAGCAACGGGTACTTGTCGAGTATT
. : . : . : . : . : . :
rJMSF029G01+ TGAAAGGCATTCAGTCCAGAGCTGAGGAGATTGTGCAGGTACTCCAGGGCCAGGGGTAAG
rJMSF028K22+ TGAAAGGCATTCAGTCCAGAGCTGAGGAGATTGTGCAGGTACTCCAGGGCCAGGGGTAAG
rJMSF044C21+ TGAAAGGCATTCAGTCCAGAGCTGAGGAGATTGTGCAGGTACTCCAGGGCCAGGGGTAAG
____________________________________________________________
consensus TGAAAGGCATTCAGTCCAGAGCTGAGGAGATTGTGCAGGTACTCCAGGGCCAGGGGTAAG
. : . : . : . : . : . :
rJMSF029G01+ GAGCAGTACTCTATTTGTTCACAAATTGGGATGTCTTGGGCTCAAAAACTTCAATCATAT
rJMSF028K22+ GAGCAGTACTCTATTTGTTCACAAATTGGGATGTCTTGGGCTCAAAAACTTCAATCATAT
rJMSF044C21+ GAGCAGTACTCTATTTGTTCACAAATTGGGATGTCTTGGGCTCAAAAACTTCAATCATAT
____________________________________________________________
consensus GAGCAGTACTCTATTTGTTCACAAATTGGGATGTCTTGGGCTCAAAAACTTCAATCATAT
. : . : . : . : . : . :
rJMSF029G01+ TCCATTTTGGAGATGAAGGGCATATGGTTTCTTCACTGCACAGTAAAGCTACATAAAGCA
rJMSF028K22+ TCCATTTTGGAGATGAAGGGCATATGGTTTCTTCACTGCACAGTAAAGCTACATAAAGCA
rJMSF044C21+ TCCATTTTGGAGATGAAGGGCATATGGTTTCTTCACTGCACAGTAAAGCTACATAAAGCA
____________________________________________________________
consensus TCCATTTTGGAGATGAAGGGCATATGGTTTCTTCACTGCACAGTAAAGCTACATAAAGCA
. : . : . : . : . : . :
rJMSF029G01+ ATCCGAGTCCTACAATATTCATATCATGTCTTGCCTTTACTCAAAGTGCCCTTTTTTCTT
rJMSF028K22+ ATCCGAGTCCTACAATATTCATATCATGTCTTGCCTTTACTCAAAGTGCCCTTTTTTCTT
rJMSF044C21+ ATCCGAGTCCTACAATATTCATATCATGTCTTGCCTTTACTCAAAGTGCCCTTTTTTCTT
____________________________________________________________
consensus ATCCGAGTCCTACAATATTCATATCATGTCTTGCCTTTACTCAAAGTGCCCTTTTTTCTT
. : . : . : . : . : . :
rJMSF029G01+ TTAATATATTCTTTCCTGCTCTCACCTTCCTCCCTGGCTTGTTTACT
rJMSF028K22+ TTAATATATTCTTTCCTGCTCTCACCTTCCTCCCTGGCTTGTTTACTTAATCATAAGGTA
rJMSF044C21+ TTAATATATTCTTTCCTGCTCTCACCTTCCTCCCTGGCTTGTTTACTTAATCATAAGGTA
____________________________________________________________
consensus TTAATATATTCTTTCCTGCTCTCACCTTCCTCCCTGGCTTGTTTACTTAATCATAAGGTA
. : . : . : . : . : . :
rJMSF028K22+ TCATTGTGCAACATGTCTTGTATAAGGAATTCTCTCAAACTGCTG
rJMSF044C21+ TCATTGTGC-ACATGTCTTGTATAAGGAATTCTCTCAAACTGCTGGATTTCCACGTCTGT
____________________________________________________________
consensus TCATTGTGCAACATGTCTTGTATAAGGAATTCTCTCAAACTGCTGGATTTCCACGTCTGT