Contig 014092:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012I23Sequence498014092 (2)ref|XP_009619391.1|3e-50PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Nic
JMSF044B23Sequence735014092 (2)emb|CDP16205.1|9e-120unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN012I23+                                               CGCAAGTAAGTGGGAGTAGGATTG
                      ____________________________________________________________
consensus                                                 CGCAAGTAAGTGGGAGTAGGATTG
 
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JMFN012I23+           ATGTGCAAAAGAATGAATGTATTACACTCTTATTTACTCATGTAATAATCAAATTTTGGA
rJMSF044B23-                                                       TAATCAAATTTTGGA
                      ____________________________________________________________
consensus             ATGTGCAAAAGAATGAATGTATTACACTCTTATTTACTCATGTAATAATCAAATTTTGGA
 
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JMFN012I23+           GAATGTTTTTCCCATCACAAGTTTCATAATGGAGAGTTGCACTTCTTGGAGTAATCATCA
rJMSF044B23-          GAATGTTTTTCCCATCACAAGTTTCATAATGGAGAGTTGCACTTCTTGGAGTAATCATCA
                      ____________________________________________________________
consensus             GAATGTTTTTCCCATCACAAGTTTCATAATGGAGAGTTGCACTTCTTGGAGTAATCATCA
 
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JMFN012I23+           CAAACCTACCATAATTTGGAACCCTAAAACTTGATCTTCTATGACTAATCTTCTAGAGTT
rJMSF044B23-          CAAACCTACCATAATTTGGAACCCTAAAACTTGATCTTCTATGACTAATCTTCTAGAGTT
                      ____________________________________________________________
consensus             CAAACCTACCATAATTTGGAACCCTAAAACTTGATCTTCTATGACTAATCTTCTAGAGTT
 
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JMFN012I23+           ATTTCAAAACTTGAACCCAGAATGGATTGCAACAACTCCTCCTACAAGATTTTCGTATCC
rJMSF044B23-          ATTTCAAAACTTGAACCCAGAATGGATTGCAACAACTCCTCCTACAAGATTTTCGTATCC
                      ____________________________________________________________
consensus             ATTTCAAAACTTGAACCCAGAATGGATTGCAACAACTCCTCCTACAAGATTTTCGTATCC
 
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JMFN012I23+           TACATTTTGGAACCCAGCTTCTGCAATCATTGCAGCGAACTTCTCCTGTGGAGGGAAACG
rJMSF044B23-          TACATTTTGGAACCCAGCTTCTGCAATCATTGCAGCGAACTTCTCCTGTGGAGGGAAACG
                      ____________________________________________________________
consensus             TACATTTTGGAACCCAGCTTCTGCAATCATTGCAGCGAACTTCTCCTGTGGAGGGAAACG
 
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JMFN012I23+           GCGAATACTCTCAACCAAGTACTGATAAGAGTGACGATCACCAGTCACCATCTCACCGAC
rJMSF044B23-          GCGAATACTCTCAACCAAGTACTGATAAGAGTGACGATCACCAGTCACCATCTCACCGAC
                      ____________________________________________________________
consensus             GCGAATACTCTCAACCAAGTACTGATAAGAGTGACGATCACCAGTCACCATCTCACCGAC
 
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JMFN012I23+           TGCTGGGATGGCTGAGAATGAATATAAATCATACAGATCTTTAAAAATCGGGATATCAAC
rJMSF044B23-          TGCTGGGATGACTGAGAATGAATATAAATCATACAGATCTTTAAAAATCGGGATATCAAC
                      ____________________________________________________________
consensus             TGCTGGGATGGCTGAGAATGAATATAAATCATACAGATCTTTAAAAATCGGGATATCAAC
 
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JMFN012I23+           ATGACTCAGTTCAAGGCAAAGGAATCTTCCTCCCGGCTTGAGCACCCTA           
rJMSF044B23-          ATGACTCAGTTCAAGGCAAAGGAATCTTCCTCCCGGCTTGAGCACCCTATAAGCTTCAGC
                      ____________________________________________________________
consensus             ATGACTCAGTTCAAGGCAAAGGAATCTTCCTCCCGGCTTGAGCACCCTATAAGCTTCAGC
 
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rJMSF044B23-          AAGAACCTTTTCTATATGTGTGACATTCCTAATCCCAAAGGCAATTGTGTAACCATCCAT
                      ____________________________________________________________
consensus             AAGAACCTTTTCTATATGTGTGACATTCCTAATCCCAAAGGCAATTGTGTAACCATCCAT
 
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rJMSF044B23-          GGAACTGTTTTCAAATTTCAAGGCTTCTGCATCTCCCTCCATCCAAATGAGGGATTTGTC
                      ____________________________________________________________
consensus             GGAACTGTTTTCAAATTTCAAGGCTTCTGCATCTCCCTCCATCCAAATGAGGGATTTGTC
 
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rJMSF044B23-          CTCTCCAAAACCTCTTTCCTGAGCCCGCTTCTTACCAACATTTAACATGTTTGGATTGAT
                      ____________________________________________________________
consensus             CTCTCCAAAACCTCTTTCCTGAGCCCGCTTCTTACCAACATTTAACATGTTTGGATTGAT
 
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rJMSF044B23-          GTCACAGACATAAATTTGGGTTTCCTCAATCACATTATCATCAAGAATATCTTGTAAGGC
                      ____________________________________________________________
consensus             GTCACAGACATAAATTTGGGTTTCCTCAATCACATTATCATCAAGAATATCTTGTAAGGC
 
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rJMSF044B23-          TCTGCGTTTNACACTTTTGATAGTTTCCAGAATCCTGAATGCAACATCCCCCTGTCCCAC
                      ____________________________________________________________
consensus             TCTGCGTTTNACACTTTTGATAGTTTCCAGAATCCTGAATGCAACATCCCCCTGTCCCAC