| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021H07 | Sequence | 551 | 012147 (3) | ref|XP_006353741.1| | 1e-63 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 740 | 014091 (3) | gb|EYU25780.1| | 1e-95 | hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata] |
| JMFF039F13 | Sequence | 521 | 012147 (3) | ref|XP_006353741.1| | 5e-61 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 744 | 014091 (3) | gb|EYU25780.1| | 9e-95 | hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata] |
| JMSF044A14 | Sequence | 492 | 012147 (3) | ref|XP_009800312.1| | 4e-39 | PREDICTED: organic cation/carnitine transporter 7 [Nicotiana sylvestris] | 653 | 014091 (3) | gb|EYU25780.1| | 1e-72 | hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMFF039F13+ TCGGAATGCTTGTTTGTGACAACGTGCCTGAGGCCAATGAAGAATTACTTTCCA
____________________________________________________________
consensus TCGGAATGCTTGTTTGTGACAACGTGCCTGAGGCCAATGAAGAATTACTTTCCA
. : . : . : . : . : . :
rJMFF039F13+ GGCATAGAAACAAATTTGCTAATTACAAAGCGGCCTTTTCTTCTCTATTTCCTCTATTTT
rJMFF021H07+ TTTCTTCTCTATTTCCTCTATTTT
____________________________________________________________
consensus GGCATAGAAACAAATTTGCTAATTACAAAGCGGCCTTTTCTTCTCTATTTCCTCTATTTT
. : . : . : . : . : . :
rJMFF039F13+ CATCTAGATTAATAAGAACTACCCTTCTTATTTGGGTAGTTTATTTTGGAAATTCATTTT
rJMFF021H07+ CATCTAGATTAATAAGAACTACCCTTCTTATTTGGGTAGTTTATTTTGGAAATTCATTTT
____________________________________________________________
consensus CATCTAGATTAATAAGAACTACCCTTCTTATTTGGGTAGTTTATTTTGGAAATTCATTTT
. : . : . : . : . : . :
rJMFF039F13+ TGTATTATGGCGTTATATTGTTGACTTCAGAGCTTAGCAGCGACGAAGCTAAATGCATAT
rJMFF021H07+ TGTATTATGGCGTTATATTGTTGACTTCAGAGCTTAGCAGCGACGAAGCTAAATGCATAT
rJMSF044A14+ TGGCGTTATATTGTTGACTTCAGAGCTTAGCAGCGACGAAGCTAAATGCATAT
____________________________________________________________
consensus TGTATTATGGCGTTATATTGTTGACTTCAGAGCTTAGCAGCGACGAAGCTAAATGCATAT
. : . : . : . : . : . :
rJMFF039F13+ CAACTACTCC-AAACTTGAACGATGACTATAGCCTTTACAGAGATTCCTTCATCACCAGT
rJMFF021H07+ CAACTACTCC-AAACTTGAACGATGACTATAGCCTTTACAGAGATTCCTTCATCACCAGT
rJMSF044A14+ CAACTACTCCAAAACTTGAACGATGACTATAGCCTTTACAGAGATTCCTTCATCACCAGT
____________________________________________________________
consensus CAACTACTCC-AAACTTGAACGATGACTATAGCCTTTACAGAGATTCCTTCATCACCAGT
. : . : . : . : . : . :
rJMFF039F13+ CTAGCAGAGCTTCCTGGTCTTGTCTTATCAGCTGTCCTAGTGGACAAGGCTGGCCGTAAA
rJMFF021H07+ CTAGCAGAGCTTCCTGGTCTTGTCTTATCAGCTGTCCTAGTGGACAAGGCTGGCCGTAAA
rJMSF044A14+ CTAGCAGAGCTTCCTGGTCTTGTCTTATCAGCTGTCCTAGTGGACAAGGCTGGCCGTAAA
____________________________________________________________
consensus CTAGCAGAGCTTCCTGGTCTTGTCTTATCAGCTGTCCTAGTGGACAAGGCTGGCCGTAAA
. : . : . : . : . : . :
rJMFF039F13+ ATGTCATTGGTACTTATGTACGGAGCAGGCTTCCTATTTCTCTTGCCACTCGTTATCCAT
rJMFF021H07+ ATGTCATTGGTACTTATGTACGGAGCAGGCTTCCTATTTCTCTTGCCACTCGTTATCCAT
rJMSF044A14+ ATGTCATTGGTACTTATGTACGGAGCAGGCTTCCTATTTCTCTTGCCACTCGTTATCCAT
____________________________________________________________
consensus ATGTCATTGGTACTTATGTACGGAGCAGGCTTCCTATTTCTCTTGCCACTCGTTATCCAT
. : . : . : . : . : . :
rJMFF039F13+ GAGCACGAGTTTTTAACTACAGGTTTATTATTCGGAGCTCGTATGTGCTTTATTGGAACA
rJMFF021H07+ GAGCACGAGTTTTTAACTACAGGTTTATTATTCGGAGCTCGTATGTGCTTTATTGGAACA
rJMSF044A14+ GAGCACGAGTTTTTAACTACAGGTTTATTATTCGGAGCTCGTATGTGCTTTATTGGAACA
____________________________________________________________
consensus GAGCACGAGTTTTTAACTACAGGTTTATTATTCGGAGCTCGTATGTGCTTTATTGGAACA
. : . : . : . : . : . :
rJMFF039F13+ TTCACTGTCGCTGGCATCTATTGCCCCGAGATTTATCCAACCTCTGTAAGAACAACCGGG
rJMFF021H07+ TTCACTGTCGCTGGCATCTATTGCCCCGAGATTTATCCAACCTCTGTAAGAACAACCGGG
rJMSF044A14+ TTCACTGTCGCTGGCATCTATTGCCCCGAGATTTATCCAACCTCTGTAAGAACAACCGGG
____________________________________________________________
consensus TTCACTGTCGCTGGCATCTATTGCCCCGAGATTTATCCAACCTCTGTAAGAACAACCGGG
. : . : . : . : . : . :
rJMFF039F13+ GTTGGAGTTGCGAGCGCTGTTGGGCGCATCGCAGGCATGATCTGCCCGGTTGTCACGGTG
rJMFF021H07+ GTTGGAGTTGCGAGCGCTGTTGGGCGCATCGCAGGCATGATCTGCCCGGTTGTCACGGTG
rJMSF044A14+ GTTGGAGTTGCGAGCGCTGTTGGGCGCATCGCAGGCATGATCTGCCCGGTTGTCACGGTG
____________________________________________________________
consensus GTTGGAGTTGCGAGCGCTGTTGGGCGCATCGCAGGCATGATCTGCCCGGTTGTCACGGTG
. : . : . : . : . : . :
rJMFF039F13+ CAATTCATCAGTGGCTGTGAAATGACTGCTGCAATACTTCTATTCGAGGCTGTAGCAATT
rJMFF021H07+ CAATTCATCAGTGGCTGTGAAATGACTGCTGCAATACTTCTATTCGAGGCTGTAGCAATT
rJMSF044A14+ CAATTCATCAGTGGCTGTGAAATGACTGCTGCAATACTTCTATTCGAGGCTGTAGCAATT
____________________________________________________________
consensus CAATTCATCAGTGGCTGTGAAATGACTGCTGCAATACTTCTATTCGAGGCTGTAGCAATT
. : . : . : . : . : . :
rJMFF039F13+ CTTTCGGGAGTAGGAGCTTTGCTTTTCCCACTGGAAACCAAGGGCCGGAAGCTAACTGAT
rJMFF021H07+ CTTTCGGGAGTAGGAGCTTTGCTTTTCCCACTGGAAACCAAGGGCCGGAAGCTAACTGAT
rJMSF044A14+ CTTTCGGGAGTAGGAGCTTTGCTTTTCCCACTGGAAACCAAGGGCCGGAAGCTAACTGAT
____________________________________________________________
consensus CTTTCGGGAGTAGGAGCTTTGCTTTTCCCACTGGAAACCAAGGGCCGGAAGCTAACTGAT
. : . : . : . : . : . :
rJMFF039F13+ ATTGTTTCTTCATGAAAGTTTTCTATGGATA
rJMFF021H07+ ATTGTTTCTTCATGAAAGTTTTCTATGGATATTGTTTAATGAAAGGTACTTTTAGTATAT
rJMSF044A14+ ATTGTTTCTTCATGAAAGTTTTCTATGGATATTGTTTAATGAAAGGTACTTTTAGTATAT
____________________________________________________________
consensus ATTGTTTCTTCATGAAAGTTTTCTATGGATATTGTTTAATGAAAGGTACTTTTAGTATAT
. : . : . : . : . : . :
rJMFF021H07+ ACTTGAACTTGAGTAGCTGTAACAAATCACAAACAAAAGGCTCAACAAAT
rJMSF044A14+ ACTTGAACTTGAGTAGCTGTAACAAATCACAAACAAAAGGCTCAACAAATTCCAACCATT
____________________________________________________________
consensus ACTTGAACTTGAGTAGCTGTAACAAATCACAAACAAAAGGCTCAACAAATTCCAACCATT