Contig 014087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B16Sequence278001903 (6)770014087 (4)ref|XP_004240914.1|253PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum]
JMSF020B09Sequence637001903 (6)ref|XP_009799471.1|185PREDICTED: uncharacterized protein LOC104245548 [Nicotiana sylvestris]755014087 (4)ref|XP_006353432.1|6e-102PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum]
JMSF043J10Sequence715001903 (6)ref|XP_006353433.1|7e-52PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum]735014087 (4)ref|XP_004240914.1|228PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum]
JMSF047N07Sequence654001903 (6)ref|XP_006353433.1|3e-52PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum]719014087 (4)ref|XP_006353432.1|1e-92PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020B09+ TC
                      ____________________________________________________________
consensus TC
 
. : . : . : . : . : . :
rJMSF047N07+ GGGAAGTCATTAGACAAAAATTTCATG
rJMSF020B09+ TTATACTTCTTCATCCTGCTTTGGGGCCCCTTTGGGAAGTCATTAGACAAAAATTTCATG
                      ____________________________________________________________
consensus TTATACTTCTTCATCCTGCTTTGGGGCCCCTTTGGGAAGTCATTAGACAAAAATTTCATG
 
. : . : . : . : . : . :
rJMSF047N07+ GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
rJMSF020B09+ GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
rJMSF002B16+ GGAGAG
                      ____________________________________________________________
consensus GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
 
. : . : . : . : . : . :
rJMSF047N07+ ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF020B09+ ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF002B16+ ATGTCCAGCCTGATGGAAGTTNGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF043J10+ ATGGGTTCAACTATGC
                      ____________________________________________________________
consensus ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
 
. : . : . : . : . : . :
rJMSF047N07+ TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF020B09+ TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF002B16+ TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF043J10+ TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
                      ____________________________________________________________
consensus TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
 
. : . : . : . : . : . :
rJMSF047N07+ AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF020B09+ AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF002B16+ AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF043J10+ AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
                      ____________________________________________________________
consensus AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
 
. : . : . : . : . : . :
rJMSF047N07+ AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF020B09+ AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF002B16+ AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF043J10+ AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
                      ____________________________________________________________
consensus AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
 
. : . : . : . : . : . :
rJMSF047N07+ AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF020B09+ AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF002B16+ AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF043J10+ AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
                      ____________________________________________________________
consensus AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
 
. : . : . : . : . : . :
rJMSF047N07+ TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF020B09+ TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF002B16+ TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF043J10+ TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
                      ____________________________________________________________
consensus TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
 
. : . : . : . : . : . :
rJMSF047N07+ CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF020B09+ CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF002B16+ CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF043J10+ CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
                      ____________________________________________________________
consensus CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
 
. : . : . : . : . : . :
rJMSF047N07+ AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF020B09+ AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF002B16+ AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF043J10+ AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
                      ____________________________________________________________
consensus AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
 
. : . : . : . : . : . :
rJMSF047N07+ TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF020B09+ TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF002B16+ TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF043J10+ TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
                      ____________________________________________________________
consensus TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
 
. : . : . : . : . : . :
rJMSF047N07+ CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF020B09+ CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF002B16+ CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF043J10+ CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
                      ____________________________________________________________
consensus CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
 
. : . : . : . : . : . :
rJMSF047N07+ ATAGGAGAGAAGCAAAAGGGGCCACGGCTACT
rJMSF020B09+ ATAGGAGAGAAGCAAAAGGGGCCACGGCTACT
rJMSF002B16+ ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
rJMSF043J10+ ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
                      ____________________________________________________________
consensus ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
 
. : . : . : . : . : . :
rJMSF002B16+ AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
rJMSF043J10+ AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
                      ____________________________________________________________
consensus AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
 
. : . : . : . : . : . :
rJMSF002B16+ CCTCGTGTATGTTTATCTGCTAACTATAGCATTTACTCAAAAAA
rJMSF043J10+ CCTCGTGTATGTTTATCTGCT-ACTATAGCATTTACTCAAAAAACGGGAACCATCAATAT
                      ____________________________________________________________
consensus CCTCGTGTATGTTTATCTGCTAACTATAGCATTTACTCAAAAAACGGGAACCATCAATAT