Contig 014087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B16Sequence278001903 (6)770014087 (4)ref|XP_004240914.1|253PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum]
JMSF020B09Sequence637001903 (6)ref|XP_009799471.1|185PREDICTED: uncharacterized protein LOC104245548 [Nicotiana sylvestris]755014087 (4)ref|XP_006353432.1|6e-102PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum]
JMSF043J10Sequence715001903 (6)ref|XP_006353433.1|7e-52PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum]735014087 (4)ref|XP_004240914.1|228PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum]
JMSF047N07Sequence654001903 (6)ref|XP_006353433.1|3e-52PREDICTED: uncharacterized protein LOC102583756 isoform X2 [Solanum tuberosum]719014087 (4)ref|XP_006353432.1|1e-92PREDICTED: uncharacterized protein LOC102583756 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF020B09+                                                                    TC
                      ____________________________________________________________
consensus                                                                       TC
 
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rJMSF047N07+                                           GGGAAGTCATTAGACAAAAATTTCATG
rJMSF020B09+          TTATACTTCTTCATCCTGCTTTGGGGCCCCTTTGGGAAGTCATTAGACAAAAATTTCATG
                      ____________________________________________________________
consensus             TTATACTTCTTCATCCTGCTTTGGGGCCCCTTTGGGAAGTCATTAGACAAAAATTTCATG
 
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rJMSF047N07+          GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
rJMSF020B09+          GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
rJMSF002B16+                                                                GGAGAG
                      ____________________________________________________________
consensus             GGGGTTCCATCTCTGAAGGTTCAGAATTACAGATAGAGGTTGCTGAGTTTTATTGGAGAG
 
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rJMSF047N07+          ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF020B09+          ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF002B16+          ATGTCCAGCCTGATGGAAGTTNGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
rJMSF043J10+                                                      ATGGGTTCAACTATGC
                      ____________________________________________________________
consensus             ATGTCCAGCTTGATGGAAGTTTGATTATTTTGGCCGAGAATGTTATGGGTTCAACTATGC
 
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rJMSF047N07+          TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF020B09+          TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF002B16+          TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
rJMSF043J10+          TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
                      ____________________________________________________________
consensus             TAAATGAAAATGGTGAAACTGTGCTACAGTATGGAAAGAGGTGTAGCAGATGTAAGCTCA
 
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rJMSF047N07+          AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF020B09+          AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF002B16+          AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
rJMSF043J10+          AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
                      ____________________________________________________________
consensus             AGAATGTCAAGGTTCTTAATGATGGCATTGATTGGAATTCTAGAGACAACTTGTACTGGA
 
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rJMSF047N07+          AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF020B09+          AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF002B16+          AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
rJMSF043J10+          AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
                      ____________________________________________________________
consensus             AGCATGATGTGCATCGATTTGAGTCTGTAAAGGTGATACTGCATGGAAATGCTGAATTTG
 
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rJMSF047N07+          AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF020B09+          AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF002B16+          AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
rJMSF043J10+          AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
                      ____________________________________________________________
consensus             AAGCAATGGATGTTATTTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAA
 
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rJMSF047N07+          TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF020B09+          TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF002B16+          TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
rJMSF043J10+          TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
                      ____________________________________________________________
consensus             TGAAGATAACACCCGGAAATTCAGGTTTCGAAGTTCAACTTAATGCCATTGAGAATAGAT
 
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rJMSF047N07+          CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF020B09+          CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF002B16+          CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
rJMSF043J10+          CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
                      ____________________________________________________________
consensus             CAATGGATTCTGGAACCTGGTTTTGGAACTACAAGATAATGGGCACCCATATTCAATTGG
 
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rJMSF047N07+          AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF020B09+          AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF002B16+          AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
rJMSF043J10+          AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
                      ____________________________________________________________
consensus             AATTAGTGGAATCATAGGAGATGTAAACAAACGCCTACACATCACCTTCGTGAATCATGG
 
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rJMSF047N07+          TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF020B09+          TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF002B16+          TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
rJMSF043J10+          TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
                      ____________________________________________________________
consensus             TTCATGGATGGACTTGCTGCTTAGTCGCTGATTGTCTGGTTGAACTGAAGTTGAACCTTT
 
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rJMSF047N07+          CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF020B09+          CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF002B16+          CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
rJMSF043J10+          CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
                      ____________________________________________________________
consensus             CCAGCTATCTTTTCGCTTTGTAAATTGTAATGATATAATTAATATGTCAAGTGAGTAGTA
 
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rJMSF047N07+          ATAGGAGAGAAGCAAAAGGGGCCACGGCTACT                            
rJMSF020B09+          ATAGGAGAGAAGCAAAAGGGGCCACGGCTACT                            
rJMSF002B16+          ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
rJMSF043J10+          ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
                      ____________________________________________________________
consensus             ATAGGAGAGAAGCAAAAGGGGCCACGGCTACTTGTAATCTAGTTGCAAATCATGTATAAA
 
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rJMSF002B16+          AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
rJMSF043J10+          AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
                      ____________________________________________________________
consensus             AAGCAAAATTACAGATCCCACAACCGTAGTTGTATATTTGTTCTAATTATTGTAGTAATT
 
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rJMSF002B16+          CCTCGTGTATGTTTATCTGCTAACTATAGCATTTACTCAAAAAA                
rJMSF043J10+          CCTCGTGTATGTTTATCTGCT-ACTATAGCATTTACTCAAAAAACGGGAACCATCAATAT
                      ____________________________________________________________
consensus             CCTCGTGTATGTTTATCTGCTAACTATAGCATTTACTCAAAAAACGGGAACCATCAATAT