Contig 014082:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H06Sequence583000974 (6)ref|XP_009613825.1|4e-35PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana781014082 (5)ref|XP_009613825.1|3e-134PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF030D11Sequence654000974 (6)ref|XP_009761601.1|3e-40PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana727014082 (5)ref|XP_009613825.1|7e-125PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF032J22Sequence711024216ref|XP_009791008.1|2e-141PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana722014082 (5)ref|XP_009613825.1|2e-93PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF042K14Sequence780000974 (6)ref|XP_009761601.1|6e-55PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana830014082 (5)ref|XP_009613825.1|1e-122PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF048I07Sequence676000974 (6)ref|XP_009613825.1|3e-34PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana740014082 (5)ref|XP_009613825.1|3e-105PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+               GAAGATTCAGCTGGAACNTGCTCGGGCAGCAGTTAGCGATGATCCCTTTGTCGGC
                      ____________________________________________________________
consensus                  GAAGATTCAGCTGGAACNTGCTCGGGCAGCAGTTAGCGATGATCCCTTTGTCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          GGTCTTACAAAGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
rJMSF030D11+                    AGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
rJMSF042K14+                    AGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
                      ____________________________________________________________
consensus             GGTCTTACAAAGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF030D11+          TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF048I07+                                   CACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF042K14+          TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
                      ____________________________________________________________
consensus             TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF030D11+          TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF032J22+              AAATTTATGGNGAAGATGNCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF048I07+          TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF042K14+          TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
                      ____________________________________________________________
consensus             TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF030D11+          GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF032J22+          GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCNTCTGACCCCGACTTATATTGAAGAA
rJMSF048I07+          GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF042K14+          GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
                      ____________________________________________________________
consensus             GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF030D11+          GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF032J22+          GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF048I07+          GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF042K14+          GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
                      ____________________________________________________________
consensus             GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF030D11+          CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF032J22+          CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF048I07+          CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF042K14+          CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
                      ____________________________________________________________
consensus             CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF030D11+          GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF032J22+          GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF048I07+          GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF042K14+          GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
                      ____________________________________________________________
consensus             GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF030D11+          TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF032J22+          TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF048I07+          TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF042K14+          TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
                      ____________________________________________________________
consensus             TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF030D11+          GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF032J22+          GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF048I07+          GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF042K14+          GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
                      ____________________________________________________________
consensus             GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF030D11+          CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF032J22+          CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF048I07+          CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF042K14+          CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
                      ____________________________________________________________
consensus             CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF030D11+          CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF032J22+          CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF048I07+          CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF042K14+          CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
                      ____________________________________________________________
consensus             CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF030D11+          TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF032J22+          TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF048I07+          TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF042K14+          TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
                      ____________________________________________________________
consensus             TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016H06+          TCATTT                                                      
rJMSF030D11+          TCATTTAGAAT                                                 
rJMSF032J22+          TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
rJMSF048I07+          TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
rJMSF042K14+          TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
                      ____________________________________________________________
consensus             TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032J22+          TACTGAATCCCTTAGGGTAC                                        
rJMSF048I07+          TACTGAATCCCTTAGGGTAC                                        
rJMSF042K14+          TACTGAATCCCTTAGGGTACATTGACTTGGTAATTACCCCTCTCTGTCTGTCTGATGCTC
                      ____________________________________________________________
consensus             TACTGAATCCCTTAGGGTACATTGACTTGGTAATTACCCCTCTCTGTCTGTCTGATGCTC