Contig 014075:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF041N15-                          GGAAAACGCACTCTCCGCCACCGNTCCTCAGCCGCTCACGGATCA
                      ____________________________________________________________
consensus                            GGAAAACGCACTCTCCGCCACCGNTCCTCAGCCGCTCACGGATCA
 
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JMSF041N15-           TCTCTTCCGCTAAAATGTCGATTAGATCCATCTCAAGGTCCAAACTCTCCGTATATTTGT
                      ____________________________________________________________
consensus             TCTCTTCCGCTAAAATGTCGATTAGATCCATCTCAAGGTCCAAACTCTCCGTATATTTGT
 
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JMSF041N15-           CCACTGTACTCCTCAGGCACCTCTCCCAAACGCCCGCCTCAGCCGCCGCCGCCTCCAAAT
                      ____________________________________________________________
consensus             CCACTGTACTCCTCAGGCACCTCTCCCAAACGCCCGCCTCAGCCGCCGCCGCCTCCAAAT
 
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JMSF041N15-           TCTCATATGCTTCTTCCTCCTCCTCAGCGGCGCCGTTTCTTCCGCCATTCTCGACCTTCC
                      ____________________________________________________________
consensus             TCTCATATGCTTCTTCCTCCTCCTCAGCGGCGCCGTTTCTTCCGCCATTCTCGACCTTCC
 
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JMSF041N15-           GGTTTGATGTTGTTCGCGAGTATCACGACGGGCGACCTAGAGGCTCATTGTGGAGAGGCA
                      ____________________________________________________________
consensus             GGTTTGATGTTGTTCGCGAGTATCACGACGGGCGACCTAGAGGCTCATTGTGGAGAGGCA
 
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JMSF041N15-           AGAAGATGATAGGGAAGGAGGCTCTTTTCGTGATACAAGGCCTGAAGAGATTCAAAGACG
                      ____________________________________________________________
consensus             AGAAGATGATAGGGAAGGAGGCTCTTTTCGTGATACAAGGCCTGAAGAGATTCAAAGACG
 
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JMSF041N15-           ACGAAGATAAGCTCGACAAGTTCGTGAAAAACCACGTGCTTCGCCTTCTCAAATTGGACA
                      ____________________________________________________________
consensus             ACGAAGATAAGCTCGACAAGTTCGTGAAAAACCACGTGCTTCGCCTTCTCAAATTGGACA
 
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JMSF041N15-           TGGTTGCGGTGCTCAACGAGCTCGAACGCCAAGAAGAAGTTTCTCTTGCTGTTAAGAAAG
rJMSF009D08+                                                                AGAAAG
rJMSF022I22+                                                                AGAAAG
                      ____________________________________________________________
consensus             TGGTTGCGGTGCTCAACGAGCTCGAACGCCAAGAAGAAGTTTCTCTTGCTGTTAAGAAAG
 
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JMSF041N15-           ATGGAAGATGCAATGAAATTATGGGAGTTCATGAGAAAAGAAGATTTATTTCCTGATTCA
rJMSF009D08+          ATGGAAGATGCAATGAAATTATGGGAGTTCATGAGAAAAGAAGATTTATTTCCTGATTCA
rJMSF022I22+          ATGGAAGATGCAATGAAATTATGGGAGTTCATGAGAAAAGAAGATTTATTTCCTGATTCA
rJMSF041N15+                             TATGGGAGTTCATGAGAAAAGAAGATTTATTTCCTGATTCA
                      ____________________________________________________________
consensus             ATGGAAGATGCAATGAAATTATGGGAGTTCATGAGAAAAGAAGATTTATTTCCTGATTCA
 
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JMSF041N15-           CAGACATTTACTGAAGTTATTCGAGGCTTCTTGAGGGATGGATCGCCTGCAGATGCCATG
rJMSF009D08+          CAGACATTTACTGAAGTTATTCGAGGCTTCTTGAGGGATGGATCGCCTGCAGATGCCATG
rJMSF022I22+          CAGACATTTACTGAAGTTATTCGAGGCTTCTTGAGGGATGGATCGCCTGCAGATGCCATG
rJMSF041N15+          CAGACATTTACTGAAGTTATTCGAGGCTTCTTGAGGGATGGATCGCCTGCAGATGCCATG
                      ____________________________________________________________
consensus             CAGACATTTACTGAAGTTATTCGAGGCTTCTTGAGGGATGGATCGCCTGCAGATGCCATG
 
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JMSF041N15-           AATATTTATGAAGACATGAAAAAATCTCCATACCCACCAGAGCAGTTGCCTTTCAGAATT
rJMSF009D08+          AATATTTATGAAGACATGAAAAAATCTCCATACCCACCAGAGCAGTTGCCTTTCAGAATT
rJMSF022I22+          AATATTTATGAAGACATGAAAAAATCTCCATACCCACCAGAGCAGTTGCCTTTCAGAATT
rJMSF041N15+          AATATTTATGAAGACATGAAAAAATCTCCATACCCACCAGAGCAGTTGCCTTTCAGAATT
                      ____________________________________________________________
consensus             AATATTTATGAAGACATGAAAAAATCTCCATACCCACCAGAGCAGTTGCCTTTCAGAATT
 
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JMSF041N15-           TTGTTGAAGGGACTTTTGCCACATCCCCTACTAAGGAATCGGGTCAAACAAGACTTTGAG
rJMSF009D08+          TTGTTGAAGGGACTTTTGCCACATCCCCTACTAAGGAATCGGGTCAAACAAGACTTTGAG
rJMSF022I22+          TTGTTGAAGGGACTTTTGCCACATCCCCTACTAAGGAATCGGGTCAAACAAGACTTTGAG
rJMSF041N15+          TTGTTGAAGGGACTTTTGCCACATCCCCTACTAAGGAATCGGGTCAAACAAGACTTTGAG
                      ____________________________________________________________
consensus             TTGTTGAAGGGACTTTTGCCACATCCCCTACTAAGGAATCGGGTCAAACAAGACTTTGAG
 
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JMSF041N15-           GAGATCTTTCCTGATCAGCGTGTTTATGATCCTCCAGAAGAGATATTTGGATTATGCTGA
rJMSF009D08+          GAGATCTTTCCTGATCAGCGTGTTTATGATCCTCCAGAAGAGATATTTGGATTATGCTGA
rJMSF022I22+          GAGATCTTTCCTGATCAGCGTGTTTATGATCCTCCAGAAGAGATATTTGGATTATGCTGA
rJMSF041N15+          GAGATCTTTCCTGATCAGCGTGTTTATGATCCTCCAGAAGAGATATTTGGATTATGCTGA
                      ____________________________________________________________
consensus             GAGATCTTTCCTGATCAGCGTGTTTATGATCCTCCAGAAGAGATATTTGGATTATGCTGA
 
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JMSF041N15-           GGG                                                         
rJMSF009D08+          GGGGAAGGCAGATTGGAGCACTGATTGGCTGGCCGAGGGAATTTTCCAAGTTTTGGTTTC
rJMSF022I22+          GGGGAAGGCAGATTGGAGCACTGATTGGCTGGCCGAGGGAATTTTCCAAGTTTTGGTTTC
rJMSF041N15+          GGGGAAGGCAGATTGGAGCACTGATTGGCTGGCCGAGGGAATTTTCCAAGTTTTGGTTTC
                      ____________________________________________________________
consensus             GGGGAAGGCAGATTGGAGCACTGATTGGCTGGCCGAGGGAATTTTCCAAGTTTTGGTTTC
 
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rJMSF009D08+          TGTGATTGCATGGGCAATTTCATATGTGAAAGTGGGATTTGATATTTCTTTCTGGGATTA
rJMSF022I22+          TGTGATTGCATGGGCAATTTCATATGTGAAAGTGGGATTTGATATTTCTTTCTGGGATTA
rJMSF041N15+          TGTGATTGCATGGGCAATTTCATATGTGAAAGTGGGATTTGATATTTCTTTCTGGGATTA
                      ____________________________________________________________
consensus             TGTGATTGCATGGGCAATTTCATATGTGAAAGTGGGATTTGATATTTCTTTCTGGGATTA
 
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rJMSF009D08+          CGAAACTACTGCTTCTTGCCATTACAGAAGGTTATCAAGGTTCTGATTGACTGTAAGAAT
rJMSF022I22+          CGAAACTACTGCTTCTTGCCATTACAGAAGGTTATCAAGGTTCTGATTGACTGTAAGAAT
rJMSF041N15+          CGAAACTACTGCTTCTTGCCATTACAGAAGGTTATCAAGGTTCTGATTGACTGTAAGAAT
                      ____________________________________________________________
consensus             CGAAACTACTGCTTCTTGCCATTACAGAAGGTTATCAAGGTTCTGATTGACTGTAAGAAT
 
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rJMSF009D08+          GTAGTTACAGCACAAGTTACAAGGCCTGTGGACAATATACACATTCGCAGATTACATTCT
rJMSF022I22+          GTAGTTACAGCACAAGTTACAAGGCCTGTGGACAATATACACATTCGCAGATTACATTCT
rJMSF041N15+          GTAGTTACAGCACAAGTTACAAGGCCTGTGGACAATATACACATTCGCAGATTACATTCT
                      ____________________________________________________________
consensus             GTAGTTACAGCACAAGTTACAAGGCCTGTGGACAATATACACATTCGCAGATTACATTCT
 
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rJMSF009D08+          TGACCGCCGACTACAACGCCTAATTCATCGTTGGTGGCTTTTTCATGAGGAACTGGGAAG
rJMSF022I22+          TGACCGCCGACTACAACGCCTAATTCATCGTTGGTGGCTTTTTCATGAGGAACTGGGAAG
rJMSF041N15+          TGACCGCCGACTACAACGCCTAATTCATCGTTGGTGGCTTTTTCATGAGGAACTGGGAAG
                      ____________________________________________________________
consensus             TGACCGCCGACTACAACGCCTAATTCATCGTTGGTGGCTTTTTCATGAGGAACTGGGAAG
 
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rJMSF009D08+          TGTATTTCTCTCTGGAAGACGCTGATCTGATGAGAGAGAAAATGTGAGCTAGTTAATGTA
rJMSF022I22+          TGTATTTCTCTCTGGAAGACGCTGATCTGATGAGAGAGAAAATGTGAGCTAGTTAATGTA
rJMSF041N15+          TGTATTTCTCTCTGGAAGACGCTGATCTGATGAGAGAGAAAATGTGAGCTAGTTAATGTA
                      ____________________________________________________________
consensus             TGTATTTCTCTCTGGAAGACGCTGATCTGATGAGAGAGAAAATGTGAGCTAGTTAATGTA
 
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rJMSF009D08+          ATAATAAACTGAACAAATTGCACTTTTGGTCCTGTGACTATTAGGGTACTGACAATT   
rJMSF022I22+          ATAATAAACTGAACAAATTGCACTTTTGGTCCTGTGACTATTAGGGTACTGACAATT   
rJMSF041N15+          ATAATAAACTGAACAAATTGCACTTTTGGTCCTGTGACTATTAGGGTACTGACAATTGAG
                      ____________________________________________________________
consensus             ATAATAAACTGAACAAATTGCACTTTTGGTCCTGTGACTATTAGGGTACTGACAATTGAG