| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS090G01 | Sequence | 630 | 014072 (5) | ref|XP_011090946.1| | 1e-96 | PREDICTED: mitochondrial thiamine pyrophosphate carrier-like isoform X2 [Sesamu | |||||
| JMSF013L24 | Sequence | 338 | 012191 (2) | ref|XP_006855518.1| | 3e-09 | hypothetical protein AMTR_s00057p00207420 [Amborella trichopoda] gb|ERN16985.1| | 703 | 014072 (5) | ref|XP_006342787.1| | 3e-135 | PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Solanum tuberosum |
| JMSF041L06 | Sequence | 642 | 014072 (5) | ref|XP_011090946.1| | 8e-90 | PREDICTED: mitochondrial thiamine pyrophosphate carrier-like isoform X2 [Sesamu | 681 | 014072 (5) | gb|KEH37274.1| | 3e-25 | substrate carrier family protein [Medicago truncatula] |
| JMSF049P09 | Sequence | 687 | 012191 (2) | gb|EYU43934.1| | 1e-79 | hypothetical protein MIMGU_mgv1a009865mg [Erythranthe guttata] | 736 | 014072 (5) | ref|XP_004229228.1| | 3e-111 | PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Solanum lycopersi |
This contig is upended
. : . : . : . : . : . :
JMSF041L06- GACCGACTCAGAAACACGCCCCTAATCATCCG
____________________________________________________________
consensus GACCGACTCAGAAACACGCCCCTAATCATCCG
. : . : . : . : . : . :
JMSF041L06- CTCTTCCAATCGCCCCCCCTCCCCCGCGCATTCTTCTTCCCTCCCACCGCCATCTCCCCC
____________________________________________________________
consensus CTCTTCCAATCGCCCCCCCTCCCCCGCGCATTCTTCTTCCCTCCCACCGCCATCTCCCCC
. : . : . : . : . : . :
JMSF041L06- ATAGCCGGCAGCTCTCCTTTGATGTAACAGCGTTCCCGAACTGTCCCGCTTGTCTTCTCT
____________________________________________________________
consensus ATAGCCGGCAGCTCTCCTTTGATGTAACAGCGTTCCCGAACTGTCCCGCTTGTCTTCTCT
. : . : . : . : . : . :
JMSF041L06- CAGGCAGGTTAAGTCCAAAACAGGATATGGAAGAGGCGGGGCAGCTTAGAAGGGCAATTA
____________________________________________________________
consensus CAGGCAGGTTAAGTCCAAAACAGGATATGGAAGAGGCGGGGCAGCTTAGAAGGGCAATTA
. : . : . : . : . : . :
JMSF041L06- ACGATGCCACGGCAGGTGCAATTTCCGGTGGCATATCGAGGACCGTGACATCGCCGCTCG
____________________________________________________________
consensus ACGATGCCACGGCAGGTGCAATTTCCGGTGGCATATCGAGGACCGTGACATCGCCGCTCG
. : . : . : . : . : . :
JMSF041L06- ATGTGATTAAGATCAGATTCCAGGTTCAATTGGAACCTACTTCTAGATGGGCCTTGCTTG
____________________________________________________________
consensus ATGTGATTAAGATCAGATTCCAGGTTCAATTGGAACCTACTTCTAGATGGGCCTTGCTTG
. : . : . : . : . : . :
JMSF041L06- CCAGGGATGTATATCAACCTTCTAAGTACACTGGGATGCTGCAAGCATCTAGGGACATAT
____________________________________________________________
consensus CCAGGGATGTATATCAACCTTCTAAGTACACTGGGATGCTGCAAGCATCTAGGGACATAT
. : . : . : . : . : . :
JMSF041L06- TCAGAGAGGAAGGCTTACCGGGCTATTGGCGGGGTAACGTTCCAGCACTTTTGATGGTGA
____________________________________________________________
consensus TCAGAGAGGAAGGCTTACCGGGCTATTGGCGGGGTAACGTTCCAGCACTTTTGATGGTGA
. : . : . : . : . : . :
JMSF041L06- TGCCATATACTGCCATACAATTTACTGTGTTGCACAAGTTGAAAACCCTTGTTTCTGGAT
____________________________________________________________
consensus TGCCATATACTGCCATACAATTTACTGTGTTGCACAAGTTGAAAACCCTTGTTTCTGGAT
. : . : . : . : . : . :
JMSF041L06- CTTCAAAATCAGAAGACCACATGAACTTGAGCCCATTAGTTTCATTTACCAGCGGAGCAT
rJMSF013L24+ GCAT
____________________________________________________________
consensus CTTCAAAATCAGAAGACCACATGAACTTGAGCCCATTAGTTTCATTTACCAGCGGAGCAT
. : . : . : . : . : . :
JMSF041L06- TAGCAGGCTGTGCAGCTACCGTTGGATCATATCCATTTGACCTGCTAAGAACATTATTAG
rJMSF013L24+ TAGCAGGCTGTGCAGCTACTGTTGGATCATATCCATTTGACTTACTAAGAACCATTTTAG
rJMSF049P09+ TTGACTTACTTAGAACCATTTTAG
____________________________________________________________
consensus TAGCAGGCTGTGCAGCTACTGTTGGATCATATCCATTTGACTTACTAAGAACCATTTTAG
. : . : . : . : . : . :
JMSF041L06- CTTCACAAGG
rJMSF013L24+ CTTCACAAGGGGAGCCAAAGATTTACCCAAACATGAGGGCTGCATTTGTTGATATACTTA
JMFS090G01- GAGCCAAAGGTTTACCCAAACATGAGGTCTGCATTTGTTGATATACTTA
rJMSF049P09+ CTTCACAAGGGGAGCCAAAGATTTACCCAAACATGAGGGCTGCATTTGTTGATATACTTA
____________________________________________________________
consensus CTTCACAAGGGGAGCCAAAGATTTACCCAAACATGAGGGCTGCATTTGTTGATATACTTA
. : . : . : . : . : . :
rJMSF013L24+ AAACTCGCGGTATTCGAGGTCTGTATTCTGGATTGAGTCCTACTCTAGTAGAGATTGTTC
JMFS090G01- GAAGTCGTGGGATTCGAGGCCTGTATTCTGGATTGAGTCCTACGCTCGTCGAAATCATTC
rJMSF049P09+ AAACTCGCGGTATTCGAGGTCTGTATTCTGGATTGAGTCCTACTCTAGTAGAGATTGTTC
____________________________________________________________
consensus AAACTCGCGGTATTCGAGGTCTGTATTCTGGATTGAGTCCTACTCTAGTAGAGATTGTTC
. : . : . : . : . : . :
rJMSF013L24+ CTTACGCTGGTCTACAGTTTGGAACATATGATACGTTCAAGCGCTGGGCAATGGCTTGGA
JMFS090G01- CTTATGCTGGTTTGCAGTTTGGAACTTATGATGCATTCAAGCGCTGGACAGTGGATTGGA
rJMSF049P09+ CTTACGCTGGTCTACAGTTTGGAACATATGATACGTTCAAGCGCTGGGCAATGGCTTGGA
____________________________________________________________
consensus CTTACGCTGGTCTACAGTTTGGAACATATGATACGTTCAAGCGCTGGGCAATGGCTTGGA
. : . : . : . : . : . :
rJMSF013L24+ ACCATCGCAGGTCACCAAATACAAGCTACAGCGATGATGGTCTTTCAAGCTTCCAGCTCT
JMFS090G01- ACCGTTTTAGGTCATTAGACATGAGCCAAGGTGATTTTGCTCCTTCAAGCCTCCAGCTCT
rJMSF049P09+ ACCATCGCAGGTCACCAAATACAAGCTACAGCGATGATGGTCTTTCAAGCTTCCAGCTCT
____________________________________________________________
consensus ACCATCGCAGGTCACCAAATACAAGCTACAGCGATGATGGTCTTTCAAGCTTCCAGCTCT
. : . : . : . : . : . :
rJMSF013L24+ TTATTTGTGGGTTAGCATCTGGGACATGTGCAAAAGCTGTTTGTCATCCTCTTGATGTAG
JMFS090G01- TTTTCTGTGGTTTAGCTGCTGGAACAACTGCTAAAGCTGTTTGTCATCCCCTTGATGTAG
rJMSF049P09+ TTATTTGTGGGTTAGCATCTGGGACATGTGCAAAAGCTGTTTGTCATCCTCTTGATGTAG
____________________________________________________________
consensus TTATTTGTGGGTTAGCATCTGGGACATGTGCAAAAGCTGTTTGTCATCCTCTTGATGTAG
. : . : . : . : . : . :
rJMSF013L24+ TGAAGAAGAGGTTTCAGATTGGAGGACTACAGAGGCATGCAAGATATGGAGCTCGAGTTG
JMFS090G01- TGAAAAAGAGGTTTCAGATTGAAGGACTAAAGAGGCATCCAAGATATGGCGCTCAAGTTG
rJMSF049P09+ TGAAGAAGAGGTTTCAGATTGGAGGACTACAGAGGCATGCAAGATATGGAGCTCGAGTTG
rJMSF041L06+ CAAGATATGGCGCTCAAGTTG
____________________________________________________________
consensus TGAAGAAGAGGTTTCAGATTGGAGGACTACAGAGGCATGCAAGATATGGCGCTCAAGTTG
. : . : . : . : . : . :
rJMSF013L24+ AGCATCACGCATACAGAAACATGTACGATGCTCTTCGTCGCATTCTAATCCAGGAGGGAT
JMFS090G01- AGCATAATGCATACAGAAATATGAATGATGCTCTCCATCGCATTTTACTCCATGAGGGAT
rJMSF049P09+ AGCATCACGCATACAGAAACATGTACGATGCTCTTCGTCGCATTCTAATCCAGGAGGGAT
rJMSF041L06+ AGCATAATGCATACAGAAATATGAATGATGCTCTCCATCGCATTTTACTCCATGAGGGAT
____________________________________________________________
consensus AGCATAATGCATACAGAAATATGAATGATGCTCTCCATCGCATTTTACTCCATGAGGGAT
. : . : . : . : . : . :
rJMSF013L24+ GGGCTGGGCTTTACAAAGGCATAGTTCCATCAATTGTTAAAGCTGCACCAGCGGGTGCCG
JMFS090G01- GGGCTGGGCTTTATAAAGGCATAGTTCCATCAATTGTTAAAGCTGCTCCTGCTGGTGCTG
rJMSF049P09+ GGGCTGGGCTTTACAAAGGCATAGTTCCATCAATTGTTAAAGCTGCACCAGCGGGTGCCG
rJMSF041L06+ GGGCTGGGCTTTATAAAGGCATAGTTCCATCAATTGTTAAAGCTGCTCCTGCTGGTGCTG
____________________________________________________________
consensus GGGCTGGGCTTTATAAAGGCATAGTTCCATCAATTGTTAAAGCTGCTCCTGCTGGTGCTG
. : . : . : . : . : . :
rJMSF013L24+ TGACATTTGTTGCCTATGAATTTACATCAGATTGGTTAGAA
JMFS090G01- TAACATTTGTTGCCTACGAATTTACATCAGATTGGTTAGAA
rJMSF049P09+ TGACATTTGTTGCCTATGAATTTACATCAGATTGGTTAGAA
rJMSF041L06+ TAACATTTGTTGCCTACGAATTTACATCAGATTGGTTAGAATAGATTGAGATGAACCTAA
____________________________________________________________
consensus TAACATTTGTTGCCTACGAATTTACATCAGATTGGTTAGAATAGATTGAGATGAACCTAA
. : . : . : . : . : . :
rJMSF041L06+ CTTGTTTATTTTCAATTTTTCCTCGTGTGCTGGGGTAAGCAAGTTGGATTTTGTCATTCT
____________________________________________________________
consensus CTTGTTTATTTTCAATTTTTCCTCGTGTGCTGGGGTAAGCAAGTTGGATTTTGTCATTCT
. : . : . : . : . : . :
rJMSF041L06+ TTCAACTTGATTTATACACAAGGGTCCCCGGCGATAGGAAGGAAATAAAGGGGATGGGGG
____________________________________________________________
consensus TTCAACTTGATTTATACACAAGGGTCCCCGGCGATAGGAAGGAAATAAAGGGGATGGGGG
. : . : . : . : . : . :
rJMSF041L06+ ACACTGCTCATATATATTTTTTTGATCCCACGAGGGCATAATTTTATAGTTATAGGAAGT
____________________________________________________________
consensus ACACTGCTCATATATATTTTTTTGATCCCACGAGGGCATAATTTTATAGTTATAGGAAGT
. : . : . : . : . : . :
rJMSF041L06+ TTAGTAGCAGGATTTGTTGTTCACACAGCAGAATGCTGTTATTCATCTTATTCATAGATA
____________________________________________________________
consensus TTAGTAGCAGGATTTGTTGTTCACACAGCAGAATGCTGTTATTCATCTTATTCATAGATA
. : . : . : . : . : . :
rJMSF041L06+ TAAAATGGTTCCATATTGCAATATTTTCTTCTTGTTGATACCTTATGTGAAGTGCAGGGA
____________________________________________________________
consensus TAAAATGGTTCCATATTGCAATATTTTCTTCTTGTTGATACCTTATGTGAAGTGCAGGGA
. : . : . : . : . : . :
rJMSF041L06+ TTGGCATATATATGCTCAAATCATTGGTACAAACATATCCTCCAAACATGATTTAATATA
____________________________________________________________
consensus TTGGCATATATATGCTCAAATCATTGGTACAAACATATCCTCCAAACATGATTTAATATA
. : . : . : . : . : . :
rJMSF041L06+ GTTTTAGTTATGGCCTCTTTTATTTCAGATGTTAAGGAAGTCTGCAGCAGCACCCATACA
____________________________________________________________
consensus GTTTTAGTTATGGCCTCTTTTATTTCAGATGTTAAGGAAGTCTGCAGCAGCACCCATACA
. : . : . : . : . : . :
rJMSF041L06+ GAGCTAAGCAAGAAGGGATTGAGGCCTCAAACAATTTCAAAATGTAATTTGCAAAAGACT
____________________________________________________________
consensus GAGCTAAGCAAGAAGGGATTGAGGCCTCAAACAATTTCAAAATGTAATTTGCAAAAGACT