Contig 014070:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011E24Sequence600014070 (2)ref|XP_004236651.1|6e-88PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [Solanum ly
JMSF041J17Sequence833024255ref|XP_004236651.1|7e-18PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [Solanum ly624014070 (2)gb|KDP35513.1|6e-40hypothetical protein JCGZ_08951 [Jatropha curcas]

Alignment

This contig is upended


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JMFN011E24-                         TAAAATGGCGACGGAGCTGAACCTAAAGCCAGAGAGCAGCAGCCAA
                      ____________________________________________________________
consensus                           TAAAATGGCGACGGAGCTGAACCTAAAGCCAGAGAGCAGCAGCCAA
 
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JMFN011E24-           CCCGAGAGTGAGACTAAGAATGAGGAGGAAGAGGAAGCTCGAAGAAGAAGAAATTCAAGG
                      ____________________________________________________________
consensus             CCCGAGAGTGAGACTAAGAATGAGGAGGAAGAGGAAGCTCGAAGAAGAAGAAATTCAAGG
 
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JMFN011E24-           AAAGAATTTGATCTTGGAAATGGAAGCGAGGTGATTTACATACCCAGATTCATGTCCTAC
                      ____________________________________________________________
consensus             AAAGAATTTGATCTTGGAAATGGAAGCGAGGTGATTTACATACCCAGATTCATGTCCTAC
 
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JMFN011E24-           GACCAATCTTGGGAATATTTGGAATACCTTAACAAACACATCCCTTGGACCCGACCCACC
                      ____________________________________________________________
consensus             GACCAATCTTGGGAATATTTGGAATACCTTAACAAACACATCCCTTGGACCCGACCCACC
 
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JMFN011E24-           ATTCGCGTATTCGGCCGACCATTTCTTCAGCCTAGAGACACTTGCTATGTTGCTAGTGAA
                      ____________________________________________________________
consensus             ATTCGCGTATTCGGCCGACCATTTCTTCAGCCTAGAGACACTTGCTATGTTGCTAGTGAA
 
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JMFN011E24-           GGATTGTCCGAGCTGGTTTACAGTGGATATAAGCCCCACGCTTATTCTTGGGATGAATTC
                      ____________________________________________________________
consensus             GGATTGTCCGAGCTGGTTTACAGTGGATATAAGCCCCACGCTTATTCTTGGGATGAATTC
 
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JMFN011E24-           CCTCCTCTCAAGGAGATTCTAGATGCAGTTCATAAAGCTATTCCTGGAAGCCACTTCAAC
                      ____________________________________________________________
consensus             CCTCCTCTCAAGGAGATTCTAGATGCAGTTCATAAAGCTATTCCTGGAAGCCACTTCAAC
 
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JMFN011E24-           AGCTTGCTTTTGAATAGGTACAAGGGTGGAAATGACTATGTTGGCTGGCATTCTGACGAT
rJMSF041J17+                                              TATGTTGGCTGGCATTCTGACGAT
                      ____________________________________________________________
consensus             AGCTTGCTTTTGAATAGGTACAAGGGTGGAAATGACTATGTTGGCTGGCATTCTGACGAT
 
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JMFN011E24-           GAG-AAACTTTATGGACCAACTCCCGAAATCGCCTCTGTTTCTTTTGGATGCGAACGCGA
rJMSF041J17+          GAGNAAACTTTATGGACCAACTCCCGNAATCGCCTCTGTTTCTTTNGGATGCGAACGCGA
                      ____________________________________________________________
consensus             GAGNAAACTTTATGGACCAACTCCCGAAATCGCCTCTGTTTCTTTTGGATGCGAACGCGA
 
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JMFN011E24-           TTTCTTCTTGAAAA                                              
rJMSF041J17+          TTTCTTCTTGAAAAAGAAGCCAAATAAAACATCCCGAGCAGGTAAAAACGCTGAGGGTGA
                      ____________________________________________________________
consensus             TTTCTTCTTGAAAAAGAAGCCAAATAAAACATCCCGAGCAGGTAAAAACGCTGAGGGTGA
 
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rJMSF041J17+          ACCTCCCAGCAAGCGATCTAAAAAGCATGATAACTCTGAGCAACACCATTTTGCGCTAAA
                      ____________________________________________________________
consensus             ACCTCCCAGCAAGCGATCTAAAAAGCATGATAACTCTGAGCAACACCATTTTGCGCTAAA
 
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rJMSF041J17+          GAATGGGTCACTGTTGGTGATGAGAGGCTATACTCAACGGGATTGGCTCCACTCGGTACC
                      ____________________________________________________________
consensus             GAATGGGTCACTGTTGGTGATGAGAGGCTATACTCAACGGGATTGGCTCCACTCGGTACC
 
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rJMSF041J17+          AAAGCGTGCAAAAGTAGAGGCTGTACGGATTAACCTCACCTTCAGGTGCATTCTTTGATT
                      ____________________________________________________________
consensus             AAAGCGTGCAAAAGTAGAGGCTGTACGGATTAACCTCACCTTCAGGTGCATTCTTTGATT
 
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rJMSF041J17+          GGTTGGAAAATTACTTGTGTGATGGATGCCATACCAAGTCGAAGTTGCTGTAAGAAAGTT
                      ____________________________________________________________
consensus             GGTTGGAAAATTACTTGTGTGATGGATGCCATACCAAGTCGAAGTTGCTGTAAGAAAGTT
 
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rJMSF041J17+          GACACGTTTTTGAGAAAATGGAGTTCACAGTTGAACATGGTTAACTGCTAGATTTGAGTT
                      ____________________________________________________________
consensus             GACACGTTTTTGAGAAAATGGAGTTCACAGTTGAACATGGTTAACTGCTAGATTTGAGTT
 
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rJMSF041J17+          TTGGTGCAAGTCTTGAAGGCTATGGGTGTTGAGTAAGACAGCATAGGAGCTCATCAAGGT
                      ____________________________________________________________
consensus             TTGGTGCAAGTCTTGAAGGCTATGGGTGTTGAGTAAGACAGCATAGGAGCTCATCAAGGT
 
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rJMSF041J17+          CACAAAATCCCAAGGTCTGATATGAGTCTTTTATGAGTTGGTGTAATCATTTTTGTGCAG
                      ____________________________________________________________
consensus             CACAAAATCCCAAGGTCTGATATGAGTCTTTTATGAGTTGGTGTAATCATTTTTGTGCAG
 
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rJMSF041J17+          GGTTGATAAGGCCTAAACATGACCTGTCACTTAAAGGCAGATATGGCTCATTTCTTACGC
                      ____________________________________________________________
consensus             GGTTGATAAGGCCTAAACATGACCTGTCACTTAAAGGCAGATATGGCTCATTTCTTACGC