Contig 014069:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF041G08-                                                         GGGTCAAAGCTTCC
                      ____________________________________________________________
consensus                                                           GGGTCAAAGCTTCC
 
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JMSF041G08-           AAAATGTTAGCTCAATCTCCCATCTCTGCAGGCCAGATCCAACACCTGAAAGCCGGCCGG
                      ____________________________________________________________
consensus             AAAATGTTAGCTCAATCTCCCATCTCTGCAGGCCAGATCCAACACCTGAAAGCCGGCCGG
 
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JMSF041G08-           AAGCCTCTCCAGCCAAAGAACGCTCCGGCGACTCCACTCGCCGCCGACGCAATCAAGCCC
                      ____________________________________________________________
consensus             AAGCCTCTCCAGCCAAAGAACGCTCCGGCGACTCCACTCGCCGCCGACGCAATCAAGCCC
 
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JMSF041G08-           AAACTGAAACCCGACTGGATCGAGATTTCACTGACCAACAGCTCGAACAACAAGGAAAAT
                      ____________________________________________________________
consensus             AAACTGAAACCCGACTGGATCGAGATTTCACTGACCAACAGCTCGAACAACAAGGAAAAT
 
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JMSF041G08-           GTCCATCCCCTGCACGCGCCGCCGCCGGCGAAGAGCAAGCCGAGCTGTAACATCGAGCTG
                      ____________________________________________________________
consensus             GTCCATCCCCTGCACGCGCCGCCGCCGGCGAAGAGCAAGCCGAGCTGTAACATCGAGCTG
 
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JMSF041G08-           TGCGATTCCTCGCTGGCGGAGGAGCTCAGCGCGATCCGGGAGAGGCTCGAGCGGTTGAGG
                      ____________________________________________________________
consensus             TGCGATTCCTCGCTGGCGGAGGAGCTCAGCGCGATCCGGGAGAGGCTCGAGCGGTTGAGG
 
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JMSF041G08-           ATCGACAAGCAGAAGACGGAGGAGATGCTCCGGGAGCGAGACGCGGCACTGGAGTTGCAG
                      ____________________________________________________________
consensus             ATCGACAAGCAGAAGACGGAGGAGATGCTCCGGGAGCGAGACGCGGCACTGGAGTTGCAG
 
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JMSF041G08-           ATGCGGGAGCTGATGAACAGAGGAGAAATCCAGAAGCAGCTCGAGCTCGAGGTCGATCGC
                      ____________________________________________________________
consensus             ATGCGGGAGCTGATGAACAGAGGAGAAATCCAGAAGCAGCTCGAGCTCGAGGTCGATCGC
 
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JMSF041G08-           CTCTTCCGATTGAAGGAGCTCCGAGTATCTTGTATGAGAATATCTCCGATTCAATCCCTC
rJMSF042G08+                                       TTGTATGAGAATATNTCCGATTCAATCCCTC
rJMSF041G08+                                       TTGTATGAGAATATCTCCGATTCAATCCCTC
                      ____________________________________________________________
consensus             CTCTTCCGATTGAAGGAGCTCCGAGTATCTTGTATGAGAATATCTCCGATTCAATCCCTC
 
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JMSF041G08-           AGAGATAAAGAAAGAGAGAAGAAGGGGAAAGAAGATCAATCCAAGGAAACGGCAGAAACT
rJMSF042G08+          AGAGATAAAGAAAGAGAGAAGAAGGGGAAAGAAGNTCNATCCAAGGNAACGGCAGAAACN
rJMSF041G08+          AGAGATAAAGAAAGAGAGAAGAAGGGGAAAGAAGATCAATCCAAGGAAACGGCAGAAACT
                      ____________________________________________________________
consensus             AGAGATAAAGAAAGAGAGAAGAAGGGGAAAGAAGATCAATCCAAGGAAACGGCAGAAACT
 
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JMSF041G08-           GAAGATGAAGAAGGATTGGAGTGTGGAATCCGACCGTCGAGCCCAAATTCAGATCTTGAT
rJMSF042G08+          GAAGATGAAGAAGGATTGGAGTGTGGAATCCGACCGTCGAGCCCAAATTCAGATCTTGAT
rJMSF041G08+          GAAGATGAAGAAGGATTGGAGTGTGGAATCCGACCGTCGAGCCCAAATTCAGATCTTGAT
                      ____________________________________________________________
consensus             GAAGATGAAGAAGGATTGGAGTGTGGAATCCGACCGTCGAGCCCAAATTCAGATCTTGAT
 
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JMSF041G08-           ACAGAGGAATGAAAAAGAAGAAACAAAATTTATGAGTATTTTTCACTTTTAGTAACTCAA
rJMSF042G08+          ACNGNGGAATGAAAAAGAAGNAACNAAATTTATGNGTATTTTTCNCTTTTAGTAACTCAA
rJMSF041G08+          ACNGAGGAATGAAAAAGAAGAAACNAAATTTATGAGTATTTTTCACTTTTAGTAACTCAA
                      ____________________________________________________________
consensus             ACAGAGGAATGAAAAAGAAGAAACAAAATTTATGAGTATTTTTCACTTTTAGTAACTCAA
 
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JMSF041G08-           CTTTCCTAATATTTTCACCTATAATCTTTCACCATCATTTTTCCACCATTAGTTTATCCG
rJMSF042G08+          CTTTCCTAATATTTTCNCCTATAATCTTTCNCCATCATTTTTCCNCCNTTAGTTTATCCG
rJMSF041G08+          CTTTCCTAATATTTTCACCTATAATCTTTCACCATCATTTTTCCNCCNTTAGTTTATCCG
                      ____________________________________________________________
consensus             CTTTCCTAATATTTTCACCTATAATCTTTCACCATCATTTTTCCACCATTAGTTTATCCG
 
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JMSF041G08-           TTTTGAATTTCTTATCACTTTTAATCATTTTGAAGAGTTTTTTGAGCAAGCATTACTTGA
rJMSF042G08+          TTTTGAATTTCTTATCNCTTTTAATCATTTTGAAGAGTTTTTTGAGCNAGCNTTACTTGA
rJMSF041G08+          TTTTGAATTTCTTATCACTTTTAATCNTTTTGAAGAGTTTTTTGAGCNAGCNTTACTTGA
                      ____________________________________________________________
consensus             TTTTGAATTTCTTATCACTTTTAATCATTTTGAAGAGTTTTTTGAGCAAGCATTACTTGA
 
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JMSF041G08-           AACTGGCATGTGCACAACGGTATT                                    
rJMSF042G08+          AACTGGCATGTGCNCAACGGTATTTCNGGTGATGTTTAGCCTGAAAACTCTTTGAAAAGN
rJMSF041G08+          AACTGGCATGTGCNCAACGGTATTTCAGGTGATGTTTAGCCTGAAAACTCTTTGAAAAGA
                      ____________________________________________________________
consensus             AACTGGCATGTGCACAACGGTATTTCAGGTGATGTTTAGCCTGAAAACTCTTTGAAAAGA
 
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rJMSF042G08+          CTAAAAATGGTAAAAACNTTTAAAGTAAAATGGAGTAATAGTGGAAAAAATGATAGTAGA
rJMSF041G08+          CTAAAAATGGTAAAAACNTTTAAAGTAAAATGGAGTAATAGTGGAAAAAATGATAGTAGA
                      ____________________________________________________________
consensus             CTAAAAATGGTAAAAACNTTTAAAGTAAAATGGAGTAATAGTGGAAAAAATGATAGTAGA
 
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rJMSF042G08+          AATTATAAGTGGAAATGACCCAAATGTTGGAAAGGGTCNAAAGTGAAAAAAAAAATCAAG
rJMSF041G08+          AATTATAAGTGGAAATGACNCAAATGTTGGAAAGGGTCAAAAGTGAAAAAAAAAATCAAG
                      ____________________________________________________________
consensus             AATTATAAGTGGAAATGACCCAAATGTTGGAAAGGGTCAAAAGTGAAAAAAAAAATCAAG
 
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rJMSF042G08+          ATTTATTTATACATTATTTATTTAGTGGTGTTGGTTGGGAGAAAGGGGGGGTGGTGGGGA
rJMSF041G08+          ATTTATTTATACATTATTTATTTAGTGGTGTTGGTTGGGAGAAAGGGGGGGTGGTGGGGA
                      ____________________________________________________________
consensus             ATTTATTTATACATTATTTATTTAGTGGTGTTGGTTGGGAGAAAGGGGGGGTGGTGGGGA
 
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rJMSF042G08+          TGAGAAGAAACATGCACAATGCCTTATTGTATATGTTGGGTTTGTTTTGTAGTGTGTTTT
rJMSF041G08+          TGAGAAGAAACATGCACAATGCCTTATTGTATATGTTGGGTTTGTTTTGTAGTGTGTTTT
                      ____________________________________________________________
consensus             TGAGAAGAAACATGCACAATGCCTTATTGTATATGTTGGGTTTGTTTTGTAGTGTGTTTT
 
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rJMSF042G08+          GGGGTTCATCTTTGAAGCCACGAGTTTGTGGACAGAAACAGCAATACC            
rJMSF041G08+          GGGGTTCATCTTTGAAGCCACGAGTTTGTGGACAGAAACAGCAATACCCACTTTTGTTTC
                      ____________________________________________________________
consensus             GGGGTTCATCTTTGAAGCCACGAGTTTGTGGACAGAAACAGCAATACCCACTTTTGTTTC