Contig 014067:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052P02-                                                                  GCAGC
                      ____________________________________________________________
consensus                                                                    GCAGC
 
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JMSF052P02-           AAATGCAAATCTACATCATCCGATCATCGATCTGATCAGACCTGAGTCCTGTTTCGGGTA
JMSF041A03-                                                      GAGTCCTGTTTCGGGTA
                      ____________________________________________________________
consensus             AAATGCAAATCTACATCATCCGATCATCGATCTGATCAGACCTGAGTCCTGTTTCGGGTA
 
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JMSF052P02-           AACCCAAATTCATTGTTTCTTCCCAGCCCCGATCTAGCACGGCAACGCGCTTCCTGCTGT
JMSF041A03-           AACCCAAATTCATTGTTTCTTCCCAGCCCCGATCTAGCACGGCAACGCGCTTCCTGCTGT
                      ____________________________________________________________
consensus             AACCCAAATTCATTGTTTCTTCCCAGCCCCGATCTAGCACGGCAACGCGCTTCCTGCTGT
 
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JMSF052P02-           TCCCATCTGTGTGTTCCACCGCCGACAGATCCCACCACCCACCACTGGTTTATTCGACTT
JMSF041A03-           TCCCATCTGTGTGTTCCACCGCCGACAGATCCCACCACCCACCACTGGTTTATTCGACTT
                      ____________________________________________________________
consensus             TCCCATCTGTGTGTTCCACCGCCGACAGATCCCACCACCCACCACTGGTTTATTCGACTT
 
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JMSF052P02-           CTGATTCGCTCTGTCAGGGAACTAAAGAGTAAGGATTCCGACTTTAACCAATCTAGACGC
JMSF041A03-           CTGATTCGCTCTGTCAGGGAACTAAAGAGTAAGGATTCCGACTTTAACCAATCTAGACGC
                      ____________________________________________________________
consensus             CTGATTCGCTCTGTCAGGGAACTAAAGAGTAAGGATTCCGACTTTAACCAATCTAGACGC
 
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JMSF052P02-           ATTCGCGTTTGGAAATGAGGCAGTAGTGCTGTGGCGGCGGCGGAGGAGGAACCGGGTTTA
JMSF041A03-           ATTCGCGTTTGGAAATGAGGCAGTAGTGCTGTGGCGGCGGCGGAGGAGGAACCGGGTTTA
                      ____________________________________________________________
consensus             ATTCGCGTTTGGAAATGAGGCAGTAGTGCTGTGGCGGCGGCGGAGGAGGAACCGGGTTTA
 
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JMSF052P02-           AGATTCTGTTTGATGGCGTTGGAAGCGACGGCGGCGACGGCGGCGGCGGTGTCGCATAGC
JMSF041A03-           AGATTCTGTTTGATGGCGTTGGAAGCGACGGCGGCGACGGCGGCGGCGGTGTCGCATAGC
                      ____________________________________________________________
consensus             AGATTCTGTTTGATGGCGTTGGAAGCGACGGCGGCGACGGCGGCGGCGGTGTCGCATAGC
 
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JMSF052P02-           TGGAAGGATGCGTACAGAGGAATGTCGTCGGATAATGTTAAGGGGTTAGTTTTGGCGTTG
JMSF041A03-           TGGAAGGATGCGTACAGAGGAATGTCGTCGGATAATGTTAAGGGGTTAGTTTTGGCGTTG
                      ____________________________________________________________
consensus             TGGAAGGATGCGTACAGAGGAATGTCGTCGGATAATGTTAAGGGGTTAGTTTTGGCGTTG
 
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JMSF052P02-           TCTTCCAGCGTTTTCATCGGTGCTAGCTTCATTGTTAAGAAGAAAGGGCTGAAGAAGGCC
JMSF041A03-           TCTTCCAGCGTTTTCATCGGTGCTAGCTTCATTGTTAAGAAGAAAGGGCTGAAGAAGGCC
                      ____________________________________________________________
consensus             TCTTCCAGCGTTTTCATCGGTGCTAGCTTCATTGTTAAGAAGAAAGGGCTGAAGAAGGCC
 
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JMSF052P02-           GGTGCTTCTGGCGTCAGGGCTGGAGCCGGAGGATATTCATACCTATATGAGCCACTATGG
JMSF041A03-           GGTGCTTCTGGCGTCAGGGCTGGAGCCGGAGGATATTCATACCTATATGAGCCACTATGG
                      ____________________________________________________________
consensus             GGTGCTTCTGGCGTCAGGGCTGGAGCCGGAGGATATTCATACCTATATGAGCCACTATGG
 
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JMSF052P02-           TGGGTGGGCATGATTACAATGATTGTTGGAGAAGTTGCCAATTTTGCAGCATATGCATTT
JMSF041A03-           TGGGTGGGCATGATTACAATGATTGTTGGAGAAGTTGCCAATTTTGCAGCATATGCATTT
                      ____________________________________________________________
consensus             TGGGTGGGCATGATTACAATGATTGTTGGAGAAGTTGCCAATTTTGCAGCATATGCATTT
 
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JMSF052P02-           GCGCCCGCTATTCTGGTTACTCCTCTTGGTGCACTTAGCATTATCATAAGTGCCGTGCTA
JMSF041A03-           GCGCCCGCTATTCTGGTTACTCCTCTTGGTGCACTTAGCATTATCATAAGTGCCGTGCTA
                      ____________________________________________________________
consensus             GCGCCCGCTATTCTGGTTACTCCTCTTGGTGCACTTAGCATTATCATAAGTGCCGTGCTA
 
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JMSF052P02-           GCTCACATTATTTTGCGGGAGAAGCTACATACGTTTGGCATT                  
JMSF041A03-           GCTCACATTATTTTGCGGGAGAAGCTACATACGTTTGGCATTTTAGGTTGTGCTTTATGC
                      ____________________________________________________________
consensus             GCTCACATTATTTTGCGGGAGAAGCTACATACGTTTGGCATTTTAGGTTGTGCTTTATGC
 
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JMSF041A03-           GTGGTGGGCTCCACCACGATTGTTCTACATGCTCCTCAAGAACGCCAGATTGAATCGGTG
rJMSF052P02+                  CTCCACCACGATTGTTCTACATGCTCCTCAAGAACGCCAGATTGAATCGGTG
                      ____________________________________________________________
consensus             GTGGTGGGCTCCACCACGATTGTTCTACATGCTCCTCAAGAACGCCAGATTGAATCGGTG
 
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JMSF041A03-           ACAG                                                        
rJMSF052P02+          ACAGAAGTGTGGGACCTTGCTACCGAGCCTGGTTTTCTCTTTTATGCATCCTTGGTGATA
rJMSF041A03+                                                  TTTATGCATCCTTGGTGATA
                      ____________________________________________________________
consensus             ACAGAAGTGTGGGACCTTGCTACCGAGCCTGGTTTTCTCTTTTATGCATCCTTGGTGATA
 
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rJMSF052P02+          ACGGCTGTTCTGATTCTCATATTTCACTATGTTCCACAATACGGGCAGACACATATAATG
rJMSF041A03+          ACGGCTGTTCTGATTCTCATATTTCACTATGTTCCACAATACGGGCAGACACATATAATG
                      ____________________________________________________________
consensus             ACGGCTGTTCTGATTCTCATATTTCACTATGTTCCACAATACGGGCAGACACATATAATG
 
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rJMSF052P02+          TGCTATATTGGTATTTGTTCATTAATCGGTTCTTTATCGGTCATGAGTGTCAAAGCACTC
rJMSF041A03+          TGCTATATTGGTATTTGTTCATTAATCGGTTCTTTATCGGTCATGAGTGTCAAAGCACTC
                      ____________________________________________________________
consensus             TGCTATATTGGTATTTGTTCATTAATCGGTTCTTTATCGGTCATGAGTGTCAAAGCACTC
 
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rJMSF052P02+          GGGATAGCCCTAAAGTTAACATTGTCGGGAATGAATCAGCTACTATATCCCCAGACTTGG
rJMSF041A03+          GGGATAGCCCTAAAGTTAACATTGTCGGGAATGAATCAGCTACTATATCCCCAGACTTGG
                      ____________________________________________________________
consensus             GGGATAGCCCTAAAGTTAACATTGTCGGGAATGAATCAGCTACTATATCCCCAGACTTGG
 
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rJMSF052P02+          GCCTTTACTTTGGTTGTCCTGATTTGTGTGCTTACTCAAATGAATTACTTAAATATGGCC
rJMSF041A03+          GCCTTTACTTTGGTTGTCCTGATTTGTGTGCTTACTCAAATGAATTACTTAAATATGGCC
                      ____________________________________________________________
consensus             GCCTTTACTTTGGTTGTCCTGATTTGTGTGCTTACTCAAATGAATTACTTAAATATGGCC
 
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rJMSF052P02+          CTGGACACGTTCAACACCGCTGTTGTGTCACCAATATATTATGTTATGTTCACGTCTCTA
rJMSF041A03+          CTGGACACGTTCAACACCGCTGTTGTGTCACCAATATATTATGTTATGTTCACGTCTCTA
                      ____________________________________________________________
consensus             CTGGACACGTTCAACACCGCTGTTGTGTCACCAATATATTATGTTATGTTCACGTCTCTA
 
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rJMSF052P02+          ACTATCTTAGCAAGCGTAATCATGTTCAAGGACTGGGATAGGCAGAACCCTACCCAAATC
rJMSF041A03+          ACTATCTTAGCAAGCGTAATCATGTTCAAGGACTGGGATAGGCAGAACCCTACCCAAATC
                      ____________________________________________________________
consensus             ACTATCTTAGCAAGCGTAATCATGTTCAAGGACTGGGATAGGCAGAACCCTACCCAAATC
 
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rJMSF052P02+          GTGACAGAAATGTGTGGGTTTGTCACGATACTTTCTGGCACGTTTCTTCTTCACAGCACC
rJMSF041A03+          GTGACAGAAATGTGTGGGTTTGTCACGATACTTTCTGGCACGTTTCTTCTTCACAGCACC
                      ____________________________________________________________
consensus             GTGACAGAAATGTGTGGGTTTGTCACGATACTTTCTGGCACGTTTCTTCTTCACAGCACC
 
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rJMSF052P02+          AAAGACATGGTGGACGGTCCCATGGGGCACTCGGTCCGACTCCCCAAGCACGTTGATGAG
rJMSF041A03+          AAAGACATGGTGGACGGTCCCATGGGGCACTCGGTCCGACTCCCCAAGCACGTTGATGAG
                      ____________________________________________________________
consensus             AAAGACATGGTGGACGGTCCCATGGGGCACTCGGTCCGACTCCCCAAGCACGTTGATGAG
 
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rJMSF052P02+          GACGGTTATGGTCAAGAAGGCGTGCCGTTGAAGCGCCAAGACTCCTCGAGATTGCCATGA
rJMSF041A03+          GACGGTTATGGTCAAGAAGGCGTGCCGTTGAAGCGCCAAGACTCCTCGAGATTGCCATGA
                      ____________________________________________________________
consensus             GACGGTTATGGTCAAGAAGGCGTGCCGTTGAAGCGCCAAGACTCCTCGAGATTGCCATGA
 
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rJMSF052P02+          TATATAACTATATATATTGCTCCCGGATGCCTCGATATTTTTTTTCTCATTATTCTTTTT
rJMSF041A03+          TATATAACTATATATATTGCTCCCGGATGCCTCGATATTTTTTTTCTCATTATTCTTTTT
                      ____________________________________________________________
consensus             TATATAACTATATATATTGCTCCCGGATGCCTCGATATTTTTTTTCTCATTATTCTTTTT
 
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rJMSF052P02+          TGCCACAGTTCTGCAGCATGGTCCACATCACATTCAAAGAAATACCACACTTGGAAATTG
rJMSF041A03+          TGCCACAGTTCTGCAGCATGGTCCACATCACATTCAAAGAAATACCACACTTGGAAATTG
                      ____________________________________________________________
consensus             TGCCACAGTTCTGCAGCATGGTCCACATCACATTCAAAGAAATACCACACTTGGAAATTG
 
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rJMSF052P02+          CATTATTATTATTGTATTCTTTGTCCATCATGTAGTTCAAAGAAAGGGAAGGTGAGAGAG
rJMSF041A03+          CATTATTATTATTGTATTCTTTGTCCATCATGTAGTTCAAAGAAAGGGAAGGTGAGAGAG
                      ____________________________________________________________
consensus             CATTATTATTATTGTATTCTTTGTCCATCATGTAGTTCAAAGAAAGGGAAGGTGAGAGAG
 
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rJMSF052P02+          ACTGTTGAAATTGTATTGTATTCTAATATTCTTTT                         
rJMSF041A03+          ACTGTTGAAATTGTATTGTATTCTAATATTCTTTTTCTATGAGTTCAAAGACAAAGAAGG
                      ____________________________________________________________
consensus             ACTGTTGAAATTGTATTGTATTCTAATATTCTTTTTCTATGAGTTCAAAGACAAAGAAGG