Contig 014064:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034F21Sequence573001853 (8)gb|AIS71904.1|2e-96mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum]716014064 (5)ref|XP_011083046.1|7e-117PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam
JMFF035E17Sequence574001853 (8)ref|XP_009621519.1|1e-99PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Nicot757014064 (5)ref|XP_011083046.1|2e-114PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam
JMFF039I22Sequence557003044 (27)ref|XP_009782909.1|2e-58PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase n755014064 (5)ref|XP_011083046.1|1e-88PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam
JMSF027F05Sequence646001853 (8)gb|AIS71904.1|9e-123mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum]764014064 (5)ref|XP_009790645.1|5e-127PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Nicot
JMSF040F04Sequence677001853 (8)gb|AIS71904.1|6e-120mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum]916014064 (5)gb|ABA46791.1|3e-141succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040F04+ TTGCTGATAGAAATGA
                      ____________________________________________________________
consensus TTGCTGATAGAAATGA
 
. : . : . : . : . : . :
rJMSF027F05+ GTGACTGCACAATGTT
rJMSF040F04+ CTCAATTGAACAAGTCAAGAAGTTGTACAATCTTTTTTGTCAATGTGACTGCACAATGTT
                      ____________________________________________________________
consensus CTCAATTGAACAAGTCAAGAAGTTGTACAATCTTTTTTGTCAATGTGACTGCACAATGTT
 
. : . : . : . : . : . :
rJMFF034F21+ GATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMSF027F05+ GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMFF035E17+ ATAAGAAGTTAGTAGCTGCTGATGTAAAACT
rJMFF039I22+ GATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMSF040F04+ GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
                      ____________________________________________________________
consensus GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
 
. : . : . : . : . : . :
rJMFF034F21+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMSF027F05+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMFF035E17+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMFF039I22+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMSF040F04+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
                      ____________________________________________________________
consensus GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
 
. : . : . : . : . : . :
rJMFF034F21+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMSF027F05+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMFF035E17+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMFF039I22+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMSF040F04+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
                      ____________________________________________________________
consensus ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
 
. : . : . : . : . : . :
rJMFF034F21+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMSF027F05+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMFF035E17+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMFF039I22+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMSF040F04+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
                      ____________________________________________________________
consensus TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
 
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rJMFF034F21+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMSF027F05+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMFF035E17+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMFF039I22+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMSF040F04+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
                      ____________________________________________________________
consensus TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
 
. : . : . : . : . : . :
rJMFF034F21+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMSF027F05+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMFF035E17+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMFF039I22+ CCAGGTCGT-GAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMSF040F04+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
                      ____________________________________________________________
consensus CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
 
. : . : . : . : . : . :
rJMFF034F21+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMSF027F05+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMFF035E17+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMFF039I22+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMSF040F04+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
                      ____________________________________________________________
consensus GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
 
. : . : . : . : . : . :
rJMFF034F21+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMSF027F05+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMFF035E17+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMFF039I22+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMSF040F04+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
                      ____________________________________________________________
consensus AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
 
. : . : . : . : . : . :
rJMFF034F21+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMSF027F05+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMFF035E17+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMFF039I22+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMSF040F04+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
                      ____________________________________________________________
consensus AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
 
. : . : . : . : . : . :
rJMFF034F21+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMSF027F05+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMFF035E17+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMFF039I22+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMSF040F04+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
                      ____________________________________________________________
consensus TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
 
. : . : . : . : . : . :
rJMFF034F21+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMSF027F05+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMFF035E17+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMFF039I22+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMSF040F04+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
                      ____________________________________________________________
consensus TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
 
. : . : . : . : . : . :
rJMFF034F21+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMSF027F05+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMFF035E17+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMFF039I22+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMSF040F04+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
                      ____________________________________________________________
consensus TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
 
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rJMFF034F21+ ATCAATTGGATGGGCAGTCCC
rJMSF027F05+ ATCAATTGGATGGGCAGTCCCATAGTGT
rJMFF035E17+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
rJMFF039I22+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
rJMSF040F04+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
                      ____________________________________________________________
consensus ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
 
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rJMFF035E17+ GAAT
rJMFF039I22+ GAAT
rJMSF040F04+ GAATACTATTTCATTTAGTTTTAATTGTTTTTTTTTGTATCAATTGGATGGGCAGTCCCA
                      ____________________________________________________________
consensus GAATACTATTTCATTTAGTTTTAATTGTTTTTTTTTGTATCAATTGGATGGGCAGTCCCA