| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034F21 | Sequence | 573 | 001853 (8) | gb|AIS71904.1| | 2e-96 | mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum] | 716 | 014064 (5) | ref|XP_011083046.1| | 7e-117 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam |
| JMFF035E17 | Sequence | 574 | 001853 (8) | ref|XP_009621519.1| | 1e-99 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Nicot | 757 | 014064 (5) | ref|XP_011083046.1| | 2e-114 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam |
| JMFF039I22 | Sequence | 557 | 003044 (27) | ref|XP_009782909.1| | 2e-58 | PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase n | 755 | 014064 (5) | ref|XP_011083046.1| | 1e-88 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Sesam |
| JMSF027F05 | Sequence | 646 | 001853 (8) | gb|AIS71904.1| | 9e-123 | mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum] | 764 | 014064 (5) | ref|XP_009790645.1| | 5e-127 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Nicot |
| JMSF040F04 | Sequence | 677 | 001853 (8) | gb|AIS71904.1| | 6e-120 | mitochondrial succinyl-CoA ligase ADP-forming subunit beta [Nicotiana tabacum] | 916 | 014064 (5) | gb|ABA46791.1| | 3e-141 | succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF040F04+ TTGCTGATAGAAATGA
____________________________________________________________
consensus TTGCTGATAGAAATGA
. : . : . : . : . : . :
rJMSF027F05+ GTGACTGCACAATGTT
rJMSF040F04+ CTCAATTGAACAAGTCAAGAAGTTGTACAATCTTTTTTGTCAATGTGACTGCACAATGTT
____________________________________________________________
consensus CTCAATTGAACAAGTCAAGAAGTTGTACAATCTTTTTTGTCAATGTGACTGCACAATGTT
. : . : . : . : . : . :
rJMFF034F21+ GATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMSF027F05+ GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMFF035E17+ ATAAGAAGTTAGTAGCTGCTGATGTAAAACT
rJMFF039I22+ GATAAGAAGTTAGTAGCTGCTGATGCAAAACT
rJMSF040F04+ GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
____________________________________________________________
consensus GGAGATCAATCCCCTTGCTGAAACTTCTGATAAGAAGTTAGTAGCTGCTGATGCAAAACT
. : . : . : . : . : . :
rJMFF034F21+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMSF027F05+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMFF035E17+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMFF039I22+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
rJMSF040F04+ GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
____________________________________________________________
consensus GAACTTTGATGATAATGCTGCTTACCGTCAGAAAGAAATCTTTTCCCTTCGTGATACAAC
. : . : . : . : . : . :
rJMFF034F21+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMSF027F05+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMFF035E17+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMFF039I22+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
rJMSF040F04+ ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
____________________________________________________________
consensus ACAGGAGGACCCTCGTGAGGTTGCTGCTGCAAAAGCTGACTTGAATTACATTGGCTTAGA
. : . : . : . : . : . :
rJMFF034F21+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMSF027F05+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMFF035E17+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMFF039I22+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
rJMSF040F04+ TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
____________________________________________________________
consensus TGGAGAAATTGGTTGCATGGTAAATGGTGCTGGATTGGCAATGGCTACCATGGACATAAT
. : . : . : . : . : . :
rJMFF034F21+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMSF027F05+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMFF035E17+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMFF039I22+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
rJMSF040F04+ TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
____________________________________________________________
consensus TAAACTACATGGCGGAACTCCAGCCAATTTTCTTGATGTTGGTGGGAATGCTAGTGAAGG
. : . : . : . : . : . :
rJMFF034F21+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMSF027F05+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMFF035E17+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMFF039I22+ CCAGGTCGT-GAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
rJMSF040F04+ CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
____________________________________________________________
consensus CCAGGTCGTGGAAGCTTTTAAAATATTAACCTCAGATGACAAGGTGAAGGCAATTTTGGT
. : . : . : . : . : . :
rJMFF034F21+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMSF027F05+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMFF035E17+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMFF039I22+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
rJMSF040F04+ GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
____________________________________________________________
consensus GAACATTTTTGGAGGGATTATGAAATGCGATGTAATCGCCAGTGGAATTGTGAATGCTGC
. : . : . : . : . : . :
rJMFF034F21+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMSF027F05+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMFF035E17+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMFF039I22+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
rJMSF040F04+ AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
____________________________________________________________
consensus AAAACAGGTTCAACTGAAAGTACCCGTCGTGGTTCGTCTCGAAGGAACCAACGTTGACCA
. : . : . : . : . : . :
rJMFF034F21+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMSF027F05+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMFF035E17+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMFF039I22+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
rJMSF040F04+ AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
____________________________________________________________
consensus AGGCAAGAGAATTCTCAAGGAAAGTGGTATGACACTTATTACCGCTGAAGATCTGGATGA
. : . : . : . : . : . :
rJMFF034F21+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMSF027F05+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMFF035E17+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMFF039I22+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
rJMSF040F04+ TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
____________________________________________________________
consensus TGCTGCTGAGAAAGCAGTTAAAGCAATTAGTGCTTAAATATTATTAGTTTTCATTGACTT
. : . : . : . : . : . :
rJMFF034F21+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMSF027F05+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMFF035E17+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMFF039I22+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
rJMSF040F04+ TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
____________________________________________________________
consensus TGGATATGTGATTAAATGTCTAAATGCACACACTCTCACACCACAATAGGAAAGTGGTGA
. : . : . : . : . : . :
rJMFF034F21+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMSF027F05+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMFF035E17+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMFF039I22+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
rJMSF040F04+ TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
____________________________________________________________
consensus TTTGCTTGCTTTTTTTCCATAAAATTTTTCAATAAGCCTCATTTTTGTTCTACAGAGGAT
. : . : . : . : . : . :
rJMFF034F21+ ATCAATTGGATGGGCAGTCCC
rJMSF027F05+ ATCAATTGGATGGGCAGTCCCATAGTGT
rJMFF035E17+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
rJMFF039I22+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
rJMSF040F04+ ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
____________________________________________________________
consensus ATCAATTGGATGGGCAGTCCCATAGTGTTGGATGTACATTTTTCTTTTTGTTCTGCTAAG
. : . : . : . : . : . :
rJMFF035E17+ GAAT
rJMFF039I22+ GAAT
rJMSF040F04+ GAATACTATTTCATTTAGTTTTAATTGTTTTTTTTTGTATCAATTGGATGGGCAGTCCCA
____________________________________________________________
consensus GAATACTATTTCATTTAGTTTTAATTGTTTTTTTTTGTATCAATTGGATGGGCAGTCCCA