Contig 014063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M06Sequence506002448 (13)emb|CDP09103.1|6e-80unnamed protein product [Coffea canephora]791014063 (9)ref|XP_006362050.1|5e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF015M07Sequence478002448 (13)emb|CDP09103.1|2e-74unnamed protein product [Coffea canephora]759014063 (9)ref|XP_006362050.1|3e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF031C06Sequence580002448 (13)emb|CDP09103.1|6e-80unnamed protein product [Coffea canephora]729014063 (9)ref|XP_006362050.1|3e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF032K18Sequence704002448 (13)ref|XP_009612859.1|6e-86PREDICTED: serine/arginine repetitive matrix protein 1 [Nicotiana tomentosiform738014063 (9)ref|XP_006362050.1|3e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF035G24Sequence713002448 (13)emb|CDP09103.1|2e-79unnamed protein product [Coffea canephora]658014063 (9)ref|XP_006362050.1|6e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF037D18Sequence682002448 (13)emb|CDP09103.1|9e-84unnamed protein product [Coffea canephora]727014063 (9)ref|XP_006362050.1|3e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF039O15Sequence662002448 (13)emb|CDP09103.1|1e-85unnamed protein product [Coffea canephora]825014063 (9)ref|XP_006362050.1|2e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF048A03Sequence661002448 (13)emb|CDP09103.1|1e-85unnamed protein product [Coffea canephora]711014063 (9)ref|XP_006362050.1|3e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum
JMSF048I18Sequence661002448 (13)ref|XP_009612859.1|3e-86PREDICTED: serine/arginine repetitive matrix protein 1 [Nicotiana tomentosiform774014063 (9)ref|XP_006362050.1|4e-11PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X1 [Solanum

Alignment

This contig is upended


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rJMSF048I18+                                                                  GGTC
                      ____________________________________________________________
consensus                                                                     GGTC
 
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rJMSF015M07+                  CTCATAGAGGCTCACATGTAGCTAAGAAGGATAGGGAATCATTGGATCTGGA
rJMSF031C06+                                                  AGGGAATCATTGGATCTGGA
rJMSF032K18+                                          AGAAGGATAGGGAATCATTGGATCTGGA
rJMSF048A03+                                                                  TGGA
rJMSF048I18+          ACCTGTGACTCATAGAGGCTCACATGTAGCTAAGAAGGATAGGGAATCATTGGATCTGGA
rJMSF037D18+                                                     GAATCATTGGATCTGGA
rJMFF001M06+                  CTCATAGAGGCTCACATGTAGCTAAGAAGGATAGGGAATCATTGGATCTGGA
                      ____________________________________________________________
consensus             ACCTGTGACTCATAGAGGCTCACATGTAGCTAAGAAGGATAGGGAATCATTGGATCTGGA
 
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rJMSF015M07+          GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF031C06+          GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF032K18+          GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF048A03+          GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF048I18+          GAGCCCCAAAGCTGATGAGAAGANCCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF037D18+          GAGCCCCNAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
rJMSF035G24+                                                              GAGGATCA
rJMFF001M06+          GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
                      ____________________________________________________________
consensus             GAGCCCCAAAGCTGATGAGAAGAACCTCAGTCGTTTAAATGCCATCCAGGGAGAGGATCA
 
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rJMSF015M07+          GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF031C06+          GCCTGTTGAGGCAAAACATTTACATGAGACATATAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF032K18+          GCCTGTTGAGGCAAAACATTTACATGAGACATATAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF048A03+          GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF048I18+          GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF037D18+          GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
rJMSF035G24+          NCCTGNTGAGGCAAAACATTTACNTGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
rJMFF001M06+          GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
                      ____________________________________________________________
consensus             GCCTGTTGAGGCAAAACATTTACATGAGACATCTAGGAAAGTGGAGGATGTTGAACAAAT
 
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rJMSF015M07+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF031C06+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF032K18+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF048A03+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF048I18+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF037D18+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMSF035G24+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
rJMFF001M06+          AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
                      ____________________________________________________________
consensus             AATTTATAAGAATTCAGGTTCTGAGGAATGTGATAAGCGAAGATCTAGAGTTAAGGAAAA
 
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rJMSF015M07+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF031C06+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF032K18+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF048A03+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF048I18+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF037D18+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF035G24+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMFF001M06+          GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
rJMSF039O15+                         ATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
                      ____________________________________________________________
consensus             GAGGAAGCACAAGAGATCTGTCAGACATGAGTCAACTTCTGATGATGATTCTAGTTATGA
 
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rJMSF015M07+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF031C06+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF032K18+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF048A03+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF048I18+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF037D18+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMSF035G24+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
rJMFF001M06+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAAAGAAGAAAGAAGA
rJMSF039O15+          TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
                      ____________________________________________________________
consensus             TTCAGGTGTGGATGAGAGGAAGGAGGCTAAGAGGAGGAAGAAAGAAGAGAAGAAAGAAGA
 
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rJMSF015M07+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF031C06+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF032K18+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF048A03+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF048I18+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF037D18+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF035G24+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMFF001M06+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
rJMSF039O15+          GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
                      ____________________________________________________________
consensus             GAAGAAATTGAGGAAGGAGGAGAAGCGTCGACGTCGGGATGATAGACGTCGTAAGAAGGA
 
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rJMSF015M07+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF031C06+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF032K18+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF048A03+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF048I18+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF037D18+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF035G24+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMFF001M06+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
rJMSF039O15+          AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
                      ____________________________________________________________
consensus             AGAGAGGCGTGCTGGGAAACAAAAATTGAAGTCAGATAATGCTATATCTTCGCCTTCTGA
 
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rJMSF015M07+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF031C06+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF032K18+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF048A03+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF048I18+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF037D18+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF035G24+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMFF001M06+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
rJMSF039O15+          TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
                      ____________________________________________________________
consensus             TGCTGAGAAGACTAACGATGGTAATGTTTCGGATGAGGACCTTGCCAGAAAAGAGTTTCA
 
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rJMSF015M07+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF031C06+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF032K18+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF048A03+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF048I18+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF037D18+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF035G24+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGATAA
rJMFF001M06+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
rJMSF039O15+          TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
                      ____________________________________________________________
consensus             TGGACGTGAGATTGAAGGGACGGATTCAGCGAAGAAGCTTGAAATTGAGTTGCGAGAGAA
 
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rJMSF015M07+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF031C06+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF032K18+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF048A03+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF048I18+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF037D18+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF035G24+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMFF001M06+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
rJMSF039O15+          GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
                      ____________________________________________________________
consensus             GGCTCTTGAGTCTCTCAGAGCAAAAAAGAGCATTGGCCACTAATTTGCATGCTGCTCTAG
 
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rJMSF015M07+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF031C06+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF032K18+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF048A03+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF048I18+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF037D18+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF035G24+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMFF001M06+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
rJMSF039O15+          GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
                      ____________________________________________________________
consensus             GACATTGGGCTGTTACTGAATCATTATAATCATTTCACTGTTTGTTTTATTTTACCAAGA
 
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rJMSF015M07+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCT              
rJMSF031C06+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTAC           
rJMSF032K18+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTAC           
rJMSF048A03+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTT             
rJMSF048I18+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTAC           
rJMSF037D18+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTAC           
rJMSF035G24+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTAC           
rJMFF001M06+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTT-CTTCTGACAGC
rJMSF039O15+          CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTTACTTCTGACAGC
                      ____________________________________________________________
consensus             CTTTTGCATGGGTGTATTCTGTATGGATGCTTAATCCAGTCTATCTTACCTTCTGACAGC
 
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rJMFF001M06+          TAAAATGCCTAAA                                               
rJMSF039O15+          TAAAATGCCTAAATGAAGATTTCCTGAGCTACTGTCTTGAGTGCAACTTTTTGCTGACCT
                      ____________________________________________________________
consensus             TAAAATGCCTAAATGAAGATTTCCTGAGCTACTGTCTTGAGTGCAACTTTTTGCTGACCT
 
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rJMSF039O15+          ACCTTCTAACTTTGCTGATGAGAAAATTTTCACCTATGTGACCTGGTTGAGCAGATCTAT
                      ____________________________________________________________
consensus             ACCTTCTAACTTTGCTGATGAGAAAATTTTCACCTATGTGACCTGGTTGAGCAGATCTAT
 
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rJMSF039O15+          GCAGCTTCATACATTGAAATCTAATACAGCTTGAAAGTTGTCCCTGGAATTGTTCATTTT
                      ____________________________________________________________
consensus             GCAGCTTCATACATTGAAATCTAATACAGCTTGAAAGTTGTCCCTGGAATTGTTCATTTT
 
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rJMSF039O15+          ATTCTTGATGCCTTGTGTTCCTGTCTTCCCCCGTTAATGCTGATGGCAACAGTTGTATCA
                      ____________________________________________________________
consensus             ATTCTTGATGCCTTGTGTTCCTGTCTTCCCCCGTTAATGCTGATGGCAACAGTTGTATCA
 
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rJMSF039O15+          GTATGACAGTATAGTGCATAATTAATTGTATGAAATTTTGTAAATACCACTGCTGATATC
                      ____________________________________________________________
consensus             GTATGACAGTATAGTGCATAATTAATTGTATGAAATTTTGTAAATACCACTGCTGATATC