Contig 014061:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039M06+                              GCCTTGACTTGCAAGGATATGTGAAAAAGATGAAAGCTTT
                      ____________________________________________________________
consensus                                 GCCTTGACTTGCAAGGATATGTGAAAAAGATGAAAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039M06+          CAGAGAGGAGTATGAGAAGTTCCTAAACTATGTGATTGAAGACCATATGGCTATGATGAA
                      ____________________________________________________________
consensus             CAGAGAGGAGTATGAGAAGTTCCTAAACTATGTGATTGAAGACCATATGGCTATGATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039M06+          AGGTGACGAGAACTTTGCCCCGAAGGACATGGTGGATATATTTTTGCAGATAGCTGATGA
                      ____________________________________________________________
consensus             AGGTGACGAGAACTTTGCCCCGAAGGACATGGTGGATATATTTTTGCAGATAGCTGATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+                                                       GGGATTAACACATGA
rJMSF039M06+          TCCAAATCTCGAGGCCGATGTTGCACTCACACGCGACCGCATCATGGGATTAACACATGA
                      ____________________________________________________________
consensus             TCCAAATCTCGAGGCCGATGTTGCACTCACACGCGACCGCATCATGGGATTAACACATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          TATGTTGGCGGGTGGCGAAGATACGACAGCCGCAACAGTGGAATGGGCATTTCAAGAATT
rJMSF039M06+          TATGTTGGCGGGTGGCGAAGATACGACAGCCGCAACAGTGGAATGGGCATTTCAAGAATT
                      ____________________________________________________________
consensus             TATGTTGGCGGGTGGCGAAGATACGACAGCCGCAACAGTGGAATGGGCATTTCAAGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          GTTTAGAAAGCCATGGATTATTGAAAAGGCAACCGAGGAGTTGGATAGAGTGATTGGGAG
rJMSF039M06+          GTTTAGAAAGCCATGGATTATTGAAAAGGCAACCGAGGAGTTGGATAGAGTGATTGGGAG
                      ____________________________________________________________
consensus             GTTTAGAAAGCCATGGATTATTGAAAAGGCAACCGAGGAGTTGGATAGAGTGATTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          GGAGAGATGGGTAGAAGAGAAAGACTTTTCGCAACTACCATATATAGATGCAATCATTAN
rJMSF039M06+          GGAGAGATGGGTAGAAGAGAAAGACTTTTCGCAACTACCATATATAGATGCAATCATTAA
                      ____________________________________________________________
consensus             GGAGAGATGGGTAGAAGAGAAAGACTTTTCGCAACTACCATATATAGATGCAATCATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          GGAAACATTCAGGTTGCATCCACTTTGCACATTGCTCCCACCACACTATTCTATTGAAGA
rJMSF039M06+          GGAAACATTCAGGTTGCATCCACTTTGCACATTGCTCCCACCACACTATTCTATTGAAGA
                      ____________________________________________________________
consensus             GGAAACATTCAGGTTGCATCCACTTTGCACATTGCTCCCACCACACTATTCTATTGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          TTGCATTGTGGCTGGTTATGAGGTACCAAGAGGAACAACTGTTNTAATTAATGTGTGGTC
rJMSF039M06+          TTGCATTGTGGCTGGTTATGAGGTACCAAGAGGAACAACTGTTCTAATTAATGTGTGGTC
                      ____________________________________________________________
consensus             TTGCATTGTGGCTGGTTATGAGGTACCAAGAGGAACAACTGTTCTAATTAATGTGTGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          AATTGGGAGGAATTCAAAGTATTGGGATAATGCAAATGAATTTTGTCCTGAACGATTCCT
rJMSF039M06+          AATTGGGAGGAATTCAAAGTATTGGGATAATGCAAATGAATTTTGTCCTGAACGATTCCT
                      ____________________________________________________________
consensus             AATTGGGAGGAATTCAAAGTATTGGGATAATGCAAATGAATTTTGTCCTGAACGATTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          AGAAAAAGATGTTGATATAAAAGGACAAGATTNTGCACTTTTACCTTNTGGGTCAGGACG
rJMSF039M06+          AGAAAAAGATGTTGATATAAAAGGACAAGATTTTGCACTTTTACCTTTTGGGTCAGGACG
                      ____________________________________________________________
consensus             AGAAAAAGATGTTGATATAAAAGGACAAGATTTTGCACTTTTACCTTTTGGGTCAGGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          AAGAAAGTGTCCCGGTTATAGTCTAGGGATGAAGGTTGTCCGGACAACATTAGCCAACTT
rJMSF039M06+          AAGAAAGTGTCCCGGTTATAGTCTAGGGATGAAGGTTGTCCGGACAACATTAGCCAACTT
                      ____________________________________________________________
consensus             AAGAAAGTGTCCCGGTTATAGTCTAGGGATGAAGGTTGTCCGGACAACATTAGCCAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          GTTACATGGATTTAAATGGAAATNAGATGGAGACCTGAAGCCAAAGGATATATCTATGGA
rJMSF039M06+          GTTACATGGATTTAAATGGAAATTAGATGGAGACCTGAAGCCAAAGGATATATCTATGGA
                      ____________________________________________________________
consensus             GTTACATGGATTTAAATGGAAATTAGATGGAGACCTGAAGCCAAAGGATATATCTATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039L06+          TGAGGCTTATGGCTTGACCA                                        
rJMSF039M06+          TGAGGCTTATGGCTTGACCACTCATCCAAAATTCCCACTGTCTTACACTATTGAACCTAG
                      ____________________________________________________________
consensus             TGAGGCTTATGGCTTGACCACTCATCCAAAATTCCCACTGTCTTACACTATTGAACCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039M06+          GCTTCCCACCCATCTTTACTAGTGTGTATAGATTTTATATCTTTATTTANCTGTGTAAGT
                      ____________________________________________________________
consensus             GCTTCCCACCCATCTTTACTAGTGTGTATAGATTTTATATCTTTATTTANCTGTGTAAGT