Contig 014060:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017D07+                       TTCTAGCTGATATAGGNTATTCCTCNGTCTGGTATGAAGATTTGGTC
rJMSF039L17+                                                                    TC
                      ____________________________________________________________
consensus                          TTCTAGCTGATATAGGNTATTCCTCNGTCTGGTATGAAGATTTGGTC
 
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rJMSF017D07+          ACTGNTGCAATCCTTATTTCATGCAGGCATTGCAACATCAACAGTTATATGAGAAAGAAG
rJMSF039L17+          ACTGTTGCAATCCTTATTTCATGCAGGCATTGCAACATCAACAGTTATATGAGAAAGAAG
                      ____________________________________________________________
consensus             ACTGTTGCAATCCTTATTTCATGCAGGCATTGCAACATCAACAGTTATATGAGAAAGAAG
 
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rJMSF017D07+          AAGCCTTGGCTGGGATAGTCTACTCCCAGGAGAAGTTGCTGCATAAGCTCAAGGAGTACA
rJMSF039L17+          AAGCCTTGGCTGGGATAGTCTACTCCCAGGAGAAGTTGCTGCATAAGCTCAAGGAGTACA
                      ____________________________________________________________
consensus             AAGCCTTGGCTGGGATAGTCTACTCCCAGGAGAAGTTGCTGCATAAGCTCAAGGAGTACA
 
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rJMSF017D07+          AAGGCGAGAACTTGGATGTTATACGCGAGGCAATTGCATTTGTTGGTGAAACAGTGGAAG
rJMSF039L17+          AAGGCGAGAACTNGGATGTTATACGCGAGGCAATTGCATTTGTTGGTGAAACAGTGGAAG
                      ____________________________________________________________
consensus             AAGGCGAGAACTTGGATGTTATACGCGAGGCAATTGCATTTGTTGGTGAAACAGTGGAAG
 
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rJMSF017D07+          AAAACAACGATCTCCTGCTCCCACCATACCCAAGCCGGCCATCTTTCTCCCTAGTATCCA
rJMSF039L17+          AAAACAACGATCTCCTGCTCCCACCATACCCAAGCCGGCCATCTTTCTCCCTAGTATCCA
                      ____________________________________________________________
consensus             AAAACAACGATCTCCTGCTCCCACCATACCCAAGCCGGCCATCTTTCTCCCTAGTATCCA
 
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rJMSF017D07+          CCAAGCCCCACATTTCACATTTCCAGTCCTCACACCTACCTTCTCAAAACGGGGTGATAA
rJMSF039L17+          CCAAGCCCCACATTTCACATTTCCAGTCCTCACACCTACCTTCTCAAAACGGGGTGATAA
                      ____________________________________________________________
consensus             CCAAGCCCCACATTTCACATTTCCAGTCCTCACACCTACCTTCTCAAAACGGGGTGATAA
 
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rJMSF017D07+          ATGGCAGCCAAAGAAACGGATTGACAAAAGATCTCATCAGACCAAACCAAACAGAGGCTA
rJMSF039L17+          ATGGCAGCCAAAGAAACGGATTGACAAAAGATCTCATCAGACCAAACCAAACAGAGGCTA
                      ____________________________________________________________
consensus             ATGGCAGCCAAAGAAACGGATTGACAAAAGATCTCATCAGACCAAACCAAACAGAGGCTA
 
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rJMSF017D07+          AAACTCCGTTGAAAATGGTGAAACGTTTCATTGGTGGAGCTGCCAAGACGGTATTGACTG
rJMSF039L17+          AAACTCCGTTGAAAATGGTGAAACGTTTCATTGGTGGAGCTGCCAAGACGGTATTGACTG
                      ____________________________________________________________
consensus             AAACTCCGTTGAAAATGGTGAAACGTTTCATTGGTGGAGCTGCCAAGACGGTATTGACTG
 
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rJMSF017D07+          TTTTGGGGGTAATATCGGTTTTGACACTTGCTGGTTTTGAGCCTAGTCTTAAGAAAAGGG
rJMSF039L17+          TTTTGGGGGTAATATCGGTTTTGACACTTGCTGGTTTTGAGCCTAGTCTTAAGAAAAGGG
                      ____________________________________________________________
consensus             TTTTGGGGGTAATATCGGTTTTGACACTTGCTGGTTTTGAGCCTAGTCTTAAGAAAAGGG
 
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rJMSF017D07+          ATAACCACATCAAGTTTATCAACCTATTTCAACTGCCTGGGGTTGATGAGAAGGAAAGAA
rJMSF039L17+          ATAACCACATCAAGTTTATCAACCTATTTCAACTGCCTGGGGTTGATGAGAAGGAAAGAA
                      ____________________________________________________________
consensus             ATAACCACATCAAGTTTATCAACCTATTTCAACTGCCTGGGGTTGATGAGAAGGAAAGAA
 
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rJMSF017D07+          AGATTGAATGTCCTCCTGGAAAGGTACCAGTGGTTGAAAATGGCGAAATTCGATGCGTCG
rJMSF039L17+          AGATTGAATGTCCTCCTGGAAAGGTACCAGTGGTTGAAAATGGCGAAATTCGATGCGTCG
                      ____________________________________________________________
consensus             AGATTGAATGTCCTCCTGGAAAGGTACCAGTGGTTGAAAATGGCGAAATTCGATGCGTCG
 
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rJMSF017D07+          TAAGGGAAAGAGTTGAAGTTCCATTTGAGTCTGTTGTTGCAACACCAGATGTAAGTTATG
rJMSF039L17+          TAAGGGAAAGAGTTGAAGTTCCATTTGAGTCTGTTGTTGCAACACCAGATGTAAGTTATG
                      ____________________________________________________________
consensus             TAAGGGAAAGAGTTGAAGTTCCATTTGAGTCTGTTGTTGCAACACCAGATGTAAGTTATG
 
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rJMSF017D07+          GGTGTGGGTGAAATCCAACTTGTTTTCCATACTTAGAGTTTGAGAGCAGAGATTATCATT
rJMSF039L17+          GGTGTGGGTGAAATCCAACTTGTTTTCCATACTTAGAGTTTGAGAGCAGAGATTATCATT
                      ____________________________________________________________
consensus             GGTGTGGGTGAAATCCAACTTGTTTTCCATACTTAGAGTTTGAGAGCAGAGATTATCATT
 
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rJMSF017D07+          TTGAAGGCATGCCTGTGCTAATGATGATGTTATCCAACCTTCC                 
rJMSF039L17+          TTGAAGGCATGCCTGTGCTAATGATGATGTTATCCAACCTTCCTTTGCTGTTATCATTTG
                      ____________________________________________________________
consensus             TTGAAGGCATGCCTGTGCTAATGATGATGTTATCCAACCTTCCTTTGCTGTTATCATTTG
 
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rJMSF039L17+          TGAATATCATCTACTTGTTGAGCTAGTATCACAATTTTTAAAATTTTCCTATTTTATTTT
                      ____________________________________________________________
consensus             TGAATATCATCTACTTGTTGAGCTAGTATCACAATTTTTAAAATTTTCCTATTTTATTTT
 
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rJMSF039L17+          ATTTTATTTTTAAAATTTTCAATGGACTGGCCCACCAAAGCCCATAGTAGAGCGGGACAA
                      ____________________________________________________________
consensus             ATTTTATTTTTAAAATTTTCAATGGACTGGCCCACCAAAGCCCATAGTAGAGCGGGACAA