| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017M24 | Sequence | 722 | 014059 (7) | ref|XP_009802396.1| | 9e-115 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri | |||||
| JMFF026O02 | Sequence | 742 | 014059 (7) | ref|XP_009802392.1| | 2e-117 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri | |||||
| JMSF002O17 | Sequence | 214 | 005280 (5) | 713 | 014059 (7) | ref|XP_009802392.1| | 6e-114 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri | |||
| JMSF003O17 | Sequence | 613 | 014059 (7) | ref|XP_009802392.1| | 1e-90 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri | |||||
| JMSF020K14 | Sequence | 562 | 005280 (5) | ref|XP_010319211.1| | 1e-24 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Solanum lycopersicu | 617 | 014059 (7) | ref|XP_009802396.1| | 9e-80 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
| JMSF029L02 | Sequence | 614 | 005280 (5) | ref|XP_011095865.1| | 134 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 632 | 014059 (7) | ref|XP_009802396.1| | 5e-85 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
| JMSF039L05 | Sequence | 633 | 005280 (5) | ref|XP_011095865.1| | 144 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 898 | 014059 (7) | ref|XP_009802396.1| | 4e-141 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF039L05+ CCTTCCATGATTGATTATTACTTCAAGGNCCCGTCGTGCAAATTNTGATCCAAACATG
____________________________________________________________
consensus CCTTCCATGATTGATTATTACTTCAAGGNCCCGTCGTGCAAATTNTGATCCAAACATG
. : . : . : . : . : . :
rJMSF039L05+ AAGTTCAGGAATCCCAAGTATCTCTCAATCATGAATCATCTTCGTTTTTACTTGCCGGAG
____________________________________________________________
consensus AAGTTCAGGAATCCCAAGTATCTCTCAATCATGAATCATCTTCGTTTTTACTTGCCGGAG
. : . : . : . : . : . :
rJMFF026O02+ TGAACAAGGTTCTCTTTTTGGACGATGATGTGGTGGTTCAAAAGGAT
rJMFF017M24+ CTTTTTGGACGATGATGTGGTGGTTCAAAAGGAT
rJMSF002O17+ CTTTTTGGACGATGATGTGGTGGTTCAAAAGGAT
rJMSF039L05+ ATCTTCCCGAAGCTGAACAAGGTTCTCTTTTTGGACGATGATGTGGTGGTTCAAAAGGAT
____________________________________________________________
consensus ATCTTCCCGAAGCTGAACAAGGTTCTCTTTTTGGACGATGATGTGGTGGTTCAAAAGGAT
. : . : . : . : . : . :
rJMFF026O02+ CTTACTCCCCTTTGGTCTGTTAATCTGAAAGGTAAAGTCATCGGTGTGGTGGAGACATGT
rJMSF003O17+ T
rJMFF017M24+ CTTACTCCCCTTTGGTCTGTTAATCTGAAAGGTAAAGTCATCGGTGTGGTGGAGACATGT
rJMSF002O17+ CTTACTCCCCTTTGGTCTGTTAATNTGAAAGGTAAAGTCATCGGTGTGGTGGAGACATGT
rJMSF039L05+ CTTACTCCCCTTTGGTCTGTTAATCTGAAAGGTAAAGTCATCGGTGTGGTGGAGACATGT
____________________________________________________________
consensus CTTACTCCCCTTTGGTCTGTTAATCTGAAAGGTAAAGTCATCGGTGTGGTGGAGACATGT
. : . : . : . : . : . :
rJMFF026O02+ GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGATTTCCAAA
rJMSF003O17+ GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGANTTCCAAA
rJMFF017M24+ GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGATTTCCAAA
rJMSF020K14+ TGATTTCCAAA
rJMSF002O17+ GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGATTTCCAAA
rJMSF029L02+ CTCAACTTCTCAAATCCCTTGATTTCCAAA
rJMSF039L05+ GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGATTTCCAAA
____________________________________________________________
consensus GGAGAAAGCTTCCATCGGTTTGATCGCTATCTCAACTTCTCAAATCCCTTGATTTCCAAA
. : . : . : . : . : . :
rJMFF026O02+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMSF003O17+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMFF017M24+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMSF020K14+ AANTTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMSF002O17+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMSF029L02+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
rJMSF039L05+ AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
____________________________________________________________
consensus AAATTCAACCCCCGTGCTTGTGGCTGGGCATTTGGAATGAACATCTTTGATCTAAATCAA
. : . : . : . : . : . :
rJMFF026O02+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMSF003O17+ TGGAGGAGGCAGAACATTACCGAGGNGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMFF017M24+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMSF020K14+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMSF002O17+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMSF029L02+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
rJMSF039L05+ TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
____________________________________________________________
consensus TGGAGGAGGCAGAACATTACCGAGGTGTATCATACTTGGCAGAACCTGAATCACGATAGA
. : . : . : . : . : . :
rJMFF026O02+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMSF003O17+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMFF017M24+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMSF020K14+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMSF002O17+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMSF029L02+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
rJMSF039L05+ CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
____________________________________________________________
consensus CAGCTGTGGAAATTGGGCACCCTTCCACCGGGTTTGATTACCTTTTGGAATTATACCTAT
. : . : . : . : . : . :
rJMFF026O02+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
rJMSF003O17+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTNCGATCCAAGTGTAAGTCAAAAG
rJMFF017M24+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
rJMSF020K14+ GCCCTTGATCGATCCTGGCATGTCCTNGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
rJMSF002O17+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
rJMSF029L02+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
rJMSF039L05+ GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
____________________________________________________________
consensus GCCCTTGATCGATCCTGGCATGTCCTTGGCCTCGGCTACGATCCAAGTGTAAGTCAAAAG
. : . : . : . : . : . :
rJMFF026O02+ GATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMSF003O17+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMFF017M24+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMSF020K14+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMSF002O17+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMSF029L02+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
rJMSF039L05+ AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
____________________________________________________________
consensus AATATTGCACAGGCAGCAGTGATACACTACAATGGTAACTTGAAACCTTGGCTCGAAATA
. : . : . : . : . : . :
rJMFF026O02+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMSF003O17+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMFF017M24+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMSF020K14+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMSF002O17+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMSF029L02+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
rJMSF039L05+ AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
____________________________________________________________
consensus AGCATTCCAAAGTTCCGAAACTACTGGTCGAAGTTTATTGATTACGACCAAATGTATCTG
. : . : . : . : . : . :
rJMFF026O02+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMSF003O17+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMFF017M24+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMSF020K14+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMSF002O17+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMSF029L02+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
rJMSF039L05+ CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
____________________________________________________________
consensus CGAGAGTGCAACATCAATTCGTTAAGCGACAGCTGATGGGTTTTTTCCCCTTCCTCTCGC
. : . : . : . : . : . :
rJMFF026O02+ TCTTTTTTACAATTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMSF003O17+ TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMFF017M24+ TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMSF020K14+ TCTTTTTTACAAGTCACTATNTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMSF002O17+ TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMSF029L02+ TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
rJMSF039L05+ TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
____________________________________________________________
consensus TCTTTTTTACAAGTCACTATTTTTTTTAGGTATATATATCAAGAATTAGAGTTAGCATTG
. : . : . : . : . : . :
rJMFF026O02+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
rJMSF003O17+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCNGATG
rJMFF017M24+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
rJMSF020K14+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
rJMSF002O17+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
rJMSF029L02+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
rJMSF039L05+ TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
____________________________________________________________
consensus TGGTTTGATTTTGTTGTGCCTGACATCTTTAGATTTCTCAGTTATGCCCGAGGGCAGATG
. : . : . : . : . : . :
rJMFF026O02+ TATCTGTAAATGATTACGCATACTCTTAT
rJMSF003O17+ TATCTGTAAATG
rJMFF017M24+ TATCTGTAAATGACTACGCATACTCT
rJMSF020K14+ TATCTGTAAATGATTA
rJMSF002O17+ TATCTGTAAATGATTACGC
rJMSF029L02+ TATCTGTAAATGATTACGCATACTCTTATCAATTTTGTATC
rJMSF039L05+ TATCTGTAAATGATTACGCATACTCTTATCAATTTTGTATCTCCCATTTTTTGTTATCCC
____________________________________________________________
consensus TATCTGTAAATGATTACGCATACTCTTATCAATTTTGTATCTCCCATTTTTTGTTATCCC