Contig 014054:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039G05Sequence624014054 (2)ref|XP_009773876.1|226PREDICTED: uncharacterized protein LOC104224025 [Nicotiana sylvestris] ref|XP_00847014054 (2)ref|XP_009773876.1|231PREDICTED: uncharacterized protein LOC104224025 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMSF039G05-                                       GAGTCTGAACAGTCAGCTTTGAGCTCCCACGC
                      ____________________________________________________________
consensus                                         GAGTCTGAACAGTCAGCTTTGAGCTCCCACGC
 
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JMSF039G05-           AAAAACTCATATATTCACTTTCCCAGATAGATTATTTCCACTTTCCATTTTGCATCAGAA
                      ____________________________________________________________
consensus             AAAAACTCATATATTCACTTTCCCAGATAGATTATTTCCACTTTCCATTTTGCATCAGAA
 
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JMSF039G05-           AACCCAAATCAGATCATCTTTCTTGGCATTCCCGAGAATGGAAGTAGCTGTAATTGATTG
                      ____________________________________________________________
consensus             AACCCAAATCAGATCATCTTTCTTGGCATTCCCGAGAATGGAAGTAGCTGTAATTGATTG
 
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JMSF039G05-           GAAGAACTTGGATTCGAGGTTTGTGAAGGATGACATCCTTGAACGGTTCAATGCTCCTCA
                      ____________________________________________________________
consensus             GAAGAACTTGGATTCGAGGTTTGTGAAGGATGACATCCTTGAACGGTTCAATGCTCCTCA
 
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JMSF039G05-           GTGGGTGGATTTCTCCGCCGCCGATGGGTTCGTCGACGACGAAGCTTGGTTCTGCCGGCC
                      ____________________________________________________________
consensus             GTGGGTGGATTTCTCCGCCGCCGATGGGTTCGTCGACGACGAAGCTTGGTTCTGCCGGCC
 
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JMSF039G05-           CGATTGCAATCATCCCAAGACTGTAAAGGATTTCCATAAAGCTGCAGCAACCCTAACTCC
                      ____________________________________________________________
consensus             CGATTGCAATCATCCCAAGACTGTAAAGGATTTCCATAAAGCTGCAGCAACCCTAACTCC
 
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JMSF039G05-           AAAGCTTCAGAAGTCATCTGGTGTTTCTGAGATTCCTCTTTTCAGGGAGCGAATTCGAAG
                      ____________________________________________________________
consensus             AAAGCTTCAGAAGTCATCTGGTGTTTCTGAGATTCCTCTTTTCAGGGAGCGAATTCGAAG
 
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JMSF039G05-           GATGTTTGACGATAGTGAGAATCAGAACCCGAACACGGAGACTCCTCATCGATTCAAAGC
rJMSF039G05+                                                               TCAAAGC
                      ____________________________________________________________
consensus             GATGTTTGACGATAGTGAGAATCAGAACCCGAACACGGAGACTCCTCATCGATTCAAAGC
 
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JMSF039G05-           TAAGCTTATGAAGGAGGCAATCAAGTCGAGTGCAGAGAAGAAGACTGTTGATGATAACTC
rJMSF039G05+          TAAGCTTATGAAGGAGGCAATCAAGTCGAGTGCAGAGAAGAAGACTGTTGATGATAACTC
                      ____________________________________________________________
consensus             TAAGCTTATGAAGGAGGCAATCAAGTCGAGTGCAGAGAAGAAGACTGTTGATGATAACTC
 
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JMSF039G05-           ATTGCCAAAGGAACAACAGACTCCAAGGTTGAGAAGCACCAATTCTGCGAGGAATCTGTT
rJMSF039G05+          ATTGCCAAAGGAACAACAGACTCCAAGGTTGAGAAGCACCAATTCTGCGAGGAATCTGTT
                      ____________________________________________________________
consensus             ATTGCCAAAGGAACAACAGACTCCAAGGTTGAGAAGCACCAATTCTGCGAGGAATCTGTT
 
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JMSF039G05-           TTCTGGTGTGGATTTGCTTAGCCGGGTGACGGAGTTTTGTAACGAGTTGAAG        
rJMSF039G05+          TTCTGGTGTGGATTTGCTTAGCCGGGTGACGGAGTTTTGTAACGAGTTGAAGAAGTTGAC
                      ____________________________________________________________
consensus             TTCTGGTGTGGATTTGCTTAGCCGGGTGACGGAGTTTTGTAACGAGTTGAAGAAGTTGAC
 
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rJMSF039G05+          AGCAAGGGCTAAGGAGAAAGAGAGGATTGGGAATGAGACTGTGGAGAGGACTCCATTAAT
                      ____________________________________________________________
consensus             AGCAAGGGCTAAGGAGAAAGAGAGGATTGGGAATGAGACTGTGGAGAGGACTCCATTAAT
 
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rJMSF039G05+          GGTGAATAAACAGGTGGTGAAAGAGGGGTTTAGTGATGAAAACAAAGATTTAGCTGAGAG
                      ____________________________________________________________
consensus             GGTGAATAAACAGGTGGTGAAAGAGGGGTTTAGTGATGAAAACAAAGATTTAGCTGAGAG
 
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rJMSF039G05+          TGGAAAGGAGAAGACTCCACTGCTAAAGAAGAATGATACAATGGGAAAGAACATTCTCAA
                      ____________________________________________________________
consensus             TGGAAAGGAGAAGACTCCACTGCTAAAGAAGAATGATACAATGGGAAAGAACATTCTCAA
 
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rJMSF039G05+          AGAAAAGCAGAGAAGAAGAAATGAAAATGCAGAAAACACCCCAATCACCATTGATGTGAA
                      ____________________________________________________________
consensus             AGAAAAGCAGAGAAGAAGAAATGAAAATGCAGAAAACACCCCAATCACCATTGATGTGAA
 
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rJMSF039G05+          GAGCGCTAAGCGGACTGGGGACGAGAGCTTATCATCACAAATCCGGACATGCCCTCCAAC
                      ____________________________________________________________
consensus             GAGCGCTAAGCGGACTGGGGACGAGAGCTTATCATCACAAATCCGGACATGCCCTCCAAC
 
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rJMSF039G05+          GCCTCAATGTTTCTCAGCCGGATCAACCAAAGCTACTCCACCTCCTAAGGCTTTTCGCTC
                      ____________________________________________________________
consensus             GCCTCAATGTTTCTCAGCCGGATCAACCAAAGCTACTCCACCTCCTAAGGCTTTTCGCTC
 
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rJMSF039G05+          AAGGCCTCCGGGAAGAGGAATTCTCCAAGAGTTGGGAAAAAGTAGCAGGAATGATAGAAA
                      ____________________________________________________________
consensus             AAGGCCTCCGGGAAGAGGAATTCTCCAAGAGTTGGGAAAAAGTAGCAGGAATGATAGAAA
 
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rJMSF039G05+          GGAGGAACCTGGAAACAAGATTAAAGAAGCTTCTTCTGCTGTGATTGAAAGTGAAGCAAG
                      ____________________________________________________________
consensus             GGAGGAACCTGGAAACAAGATTAAAGAAGCTTCTTCTGCTGTGATTGAAAGTGAAGCAAG
 
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rJMSF039G05+          AGGGTTAGATGTCTTCTGGTTCTTAAAGCCCTGCACACTTTCAACCTAAATCTGCATACT
                      ____________________________________________________________
consensus             AGGGTTAGATGTCTTCTGGTTCTTAAAGCCCTGCACACTTTCAACCTAAATCTGCATACT
 
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rJMSF039G05+          ATATTCTTTAATTCTAAGATCATTCATTCATTCTTTTCTTTCTTTGTTTACTCATAGAAA
                      ____________________________________________________________
consensus             ATATTCTTTAATTCTAAGATCATTCATTCATTCTTTTCTTTCTTTGTTTACTCATAGAAA
 
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rJMSF039G05+          TCCTTAGATGTTGGCTTCTTTCTGTTATTTGAGGGAAAATAAGTTGTAACCAACATCTTA
                      ____________________________________________________________
consensus             TCCTTAGATGTTGGCTTCTTTCTGTTATTTGAGGGAAAATAAGTTGTAACCAACATCTTA