Contig 014052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038O24Sequence644014052 (2)ref|XP_009609557.1|2e-29PREDICTED: nucleolar protein 58 isoform X2 [Nicotiana tomentosiformis]846014052 (2)ref|XP_009609557.1|1e-36PREDICTED: nucleolar protein 58 isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF038O24-                                                          AGGGGTCGATACC
                      ____________________________________________________________
consensus                                                            AGGGGTCGATACC
 
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JMSF038O24-           TTTCCTTTCTTTCGTCGTGAACTCTGAACCCCAACGCGTCTATCTATCTAGGGTTTTCTA
                      ____________________________________________________________
consensus             TTTCCTTTCTTTCGTCGTGAACTCTGAACCCCAACGCGTCTATCTATCTAGGGTTTTCTA
 
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JMSF038O24-           AGATTCCAAAGTGTGATAATTTTATGTAATTTTCCCAAAATTGAATTGATTCTAGCAGAA
                      ____________________________________________________________
consensus             AGATTCCAAAGTGTGATAATTTTATGTAATTTTCCCAAAATTGAATTGATTCTAGCAGAA
 
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JMSF038O24-           ATTTCACAATCCAAAACACGACCTACTAAGAATCTTAGCCTGTAGCGACAGAGATCAAAA
                      ____________________________________________________________
consensus             ATTTCACAATCCAAAACACGACCTACTAAGAATCTTAGCCTGTAGCGACAGAGATCAAAA
 
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JMSF038O24-           CCCTAGCAGCCGGGAGACCTCCGGGCTCTAGCCGCCTGCGAAGCATCACCGATCACCTGC
                      ____________________________________________________________
consensus             CCCTAGCAGCCGGGAGACCTCCGGGCTCTAGCCGCCTGCGAAGCATCACCGATCACCTGC
 
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JMSF038O24-           GCCCCTCCAACAGCCGGAAAAACCATCTCCGGGCGCTTGGCAGAATCGGCTCCTTCGCGA
                      ____________________________________________________________
consensus             GCCCCTCCAACAGCCGGAAAAACCATCTCCGGGCGCTTGGCAGAATCGGCTCCTTCGCGA
 
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JMSF038O24-           ACCCAGAGGACATTAGCTATGGATTTGGCAACTGAAAACAGAATTGCTGCGATTCTCTTA
                      ____________________________________________________________
consensus             ACCCAGAGGACATTAGCTATGGATTTGGCAACTGAAAACAGAATTGCTGCGATTCTCTTA
 
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JMSF038O24-           AAAGAAGCTGCAGAATTACGGCGGCAAGCTGAGAAAGATGGTGCACTTGCTTATCTTCAT
                      ____________________________________________________________
consensus             AAAGAAGCTGCAGAATTACGGCGGCAAGCTGAGAAAGATGGTGCACTTGCTTATCTTCAT
 
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JMSF038O24-           AGACCTACAGTTAGGGGGCGACCAAATTCAAGATTTCTAACGGCAACTGTTCTCGGCGTA
rJMSF038O24+                                                                GGCGTA
                      ____________________________________________________________
consensus             AGACCTACAGTTAGGGGGCGACCAAATTCAAGATTTCTAACGGCAACTGTTCTCGGCGTA
 
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JMSF038O24-           CAACAAGCTAATCGAGCTGTTGAAGTAAATGAGATGTGGCGGCTTAGACAGAAAGAGCTG
rJMSF038O24+          CAACCAGCTAATCGAGCTGTTGAAGTAANTGAGATGTGGCGGCTTAGACAGAAAGAGCTG
                      ____________________________________________________________
consensus             CAACCAGCTAATCGAGCTGTTGAAGTAAATGAGATGTGGCGGCTTAGACAGAAAGAGCTG
 
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JMSF038O24-           GAGGTTGATAATAGGAACAAACGAAGATTGGAAAATGAGTGTAGGAACAAACAAATATTG
rJMSF038O24+          GAGGTTGATAATAGGAACAAACGAAGATTGGAAAATGAGTGTAGGAACAAACAAATATTG
                      ____________________________________________________________
consensus             GAGGTTGATAATAGGAACAAACGAAGATTGGAAAATGAGTGTAGGAACAAACAAATATTG
 
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JMSF038O24-           GACAATGAGAATAAGAACAAACGTAGATCAG                             
rJMSF038O24+          GACAATGAGAATAAGAACAAACGTAGATCAGAAAATGAGAATAGCAGCACAAGGAGTCAT
                      ____________________________________________________________
consensus             GACAATGAGAATAAGAACAAACGTAGATCAGAAAATGAGAATAGCAGCACAAGGAGTCAT
 
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rJMSF038O24+          AAGGATGTTATGGAATCTAGGATTAAGGCTAAGAGACACAGTGATGTTGGTTCTACTTCA
                      ____________________________________________________________
consensus             AAGGATGTTATGGAATCTAGGATTAAGGCTAAGAGACACAGTGATGTTGGTTCTACTTCA
 
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rJMSF038O24+          AGTGCTTCATGCCCATCAAAGAAGAGAGACATTGAAGATTACTATTCAAGGGAGGATGGC
                      ____________________________________________________________
consensus             AGTGCTTCATGCCCATCAAAGAAGAGAGACATTGAAGATTACTATTCAAGGGAGGATGGC
 
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rJMSF038O24+          TTGAGGGATGCTGAAGTTGAAGAATTTTTGCATTCAAGGGCTAAGAGAGGAAGGGGCACA
                      ____________________________________________________________
consensus             TTGAGGGATGCTGAAGTTGAAGAATTTTTGCATTCAAGGGCTAAGAGAGGAAGGGGCACA
 
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rJMSF038O24+          GTCGGGTCACGAATGGATGAAACTGGTCCTTACCCTTGTTTAGATCCTGAAGAAAAGCAG
                      ____________________________________________________________
consensus             GTCGGGTCACGAATGGATGAAACTGGTCCTTACCCTTGTTTAGATCCTGAAGAAAAGCAG
 
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rJMSF038O24+          TTGTCAGGTCCTGATATGGGGCCGAGAGTAGAATTCAAAGATCATGCCATCATCGGGCCA
                      ____________________________________________________________
consensus             TTGTCAGGTCCTGATATGGGGCCGAGAGTAGAATTCAAAGATCATGCCATCATCGGGCCA
 
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rJMSF038O24+          GAGAATCCCCGTTGGTTGAATTCCTCGGAGTCTTCAGAAGATGAAATAGTTTCAGGTGAT
                      ____________________________________________________________
consensus             GAGAATCCCCGTTGGTTGAATTCCTCGGAGTCTTCAGAAGATGAAATAGTTTCAGGTGAT
 
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rJMSF038O24+          GATAAGATAAAAGTATCAAAAAAATATCATAGTAGGAAAGACAAATCTAAGAGCAAATCA
                      ____________________________________________________________
consensus             GATAAGATAAAAGTATCAAAAAAATATCATAGTAGGAAAGACAAATCTAAGAGCAAATCA
 
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rJMSF038O24+          AGAGAGAAGGATAAAAAGAGGAGGGATTCGAAAAGACACAAGTCCCACAAGTAGGATAAT
                      ____________________________________________________________
consensus             AGAGAGAAGGATAAAAAGAGGAGGGATTCGAAAAGACACAAGTCCCACAAGTAGGATAAT
 
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rJMSF038O24+          CTGAAGAAGTTTATTATGTACTCTTCAGCTGATGATCATTCATTTCCGTGTACTTTCCAG
                      ____________________________________________________________
consensus             CTGAAGAAGTTTATTATGTACTCTTCAGCTGATGATCATTCATTTCCGTGTACTTTCCAG
 
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rJMSF038O24+          CACTGGATGAAGAATTTCCAATTGCCTTGTACTATTGTGAGTTAGTATTGGGGTCTGTTG
                      ____________________________________________________________
consensus             CACTGGATGAAGAATTTCCAATTGCCTTGTACTATTGTGAGTTAGTATTGGGGTCTGTTG
 
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rJMSF038O24+          TCTACATACGGTGATTTAGTGTTTCCCACCCCTCTTCCCCTTGCAACTCTCTCTATTATT
                      ____________________________________________________________
consensus             TCTACATACGGTGATTTAGTGTTTCCCACCCCTCTTCCCCTTGCAACTCTCTCTATTATT