Contig 014050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021P18Sequence651005073 (4)ref|XP_009763656.1|6e-96PREDICTED: uncharacterized protein LOC104215532 isoform X4 [Nicotiana sylvestri788014050 (3)ref|XP_004242889.1|214PREDICTED: uncharacterized protein LOC101257579 [Solanum lycopersicum]
JMSF028E08Sequence619005073 (4)ref|XP_009763656.1|2e-93PREDICTED: uncharacterized protein LOC104215532 isoform X4 [Nicotiana sylvestri692014050 (3)ref|XP_006372225.1|4e-14tRNA pseudouridine synthase family protein [Populus trichocarpa] gb|ERP50022.1|
JMSF038H09Sequence658005073 (4)ref|XP_009763656.1|4e-99PREDICTED: uncharacterized protein LOC104215532 isoform X4 [Nicotiana sylvestri894014050 (3)ref|XP_004242889.1|224PREDICTED: uncharacterized protein LOC101257579 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038H09+ TTCTGCCAAATGGAGGCGATACTTGTACATCTTCCCTTAGAGCAAGAGGACTGC
                      ____________________________________________________________
consensus TTCTGCCAAATGGAGGCGATACTTGTACATCTTCCCTTAGAGCAAGAGGACTGC
 
. : . : . : . : . : . :
rJMSF021P18+ TTCATCAACCGAATCNATGT
rJMSF038H09+ CAACATAGGAAGGATGTTACAGATAAATATTGTTCTAATGTTCATCAACCGAATCAATGT
                      ____________________________________________________________
consensus CAACATAGGAAGGATGTTACAGATAAATATTGTTCTAATGTTCATCAACCGAATCAATGT
 
. : . : . : . : . : . :
rJMSF021P18+ GCTGACAATGATGAATGTGTAGTTGGTAATGCCGAGGGTGAAGTGGTTCCTGGCAACAAA
rJMSF038H09+ GCTGACAATGATGAATGTGTAGTTGGTAATGCCGAGGGTGAAGTGGTTCCTGGCAACAAA
                      ____________________________________________________________
consensus GCTGACAATGATGAATGTGTAGTTGGTAATGCCGAGGGTGAAGTGGTTCCTGGCAACAAA
 
. : . : . : . : . : . :
rJMSF021P18+ CCTACTAGGTTTGAAGTAAGCAAGGTTAACCACTTACTGCGCCAATTAGAAGGAAAGCTT
rJMSF038H09+ CCTACTAGGTTTGAAGTAAGCAAGGTTAACCACTTACTGCGCCAATTAGAAGGAAAGCTT
                      ____________________________________________________________
consensus CCTACTAGGTTTGAAGTAAGCAAGGTTAACCACTTACTGCGCCAATTAGAAGGAAAGCTT
 
. : . : . : . : . : . :
rJMSF021P18+ TTATCCTACAAAATGTTTGCACGAGATACTAAACCCTCAAGGAACATTGGTCCACCAACA
rJMSF038H09+ TTATCCTACAAAATGTTTGCACGAGATACTAAACCCTCAAGGAACATTGGTCCACCAACA
                      ____________________________________________________________
consensus TTATCCTACAAAATGTTTGCACGAGATACTAAACCCTCAAGGAACATTGGTCCACCAACA
 
. : . : . : . : . : . :
rJMSF021P18+ GAGCGCTTTGTCTTCCATGCCCGAGCTATTGAGGTCTCATTACCATGTGCAAAGGATGGG
rJMSF038H09+ GAGTGCTTTGTCTTCCATGCCCGAGCTATTGAGGTCTCATTACCATGTGCAAAGGATGGG
                      ____________________________________________________________
consensus GAGTGCTTTGTCTTCCATGCCCGAGCTATTGAGGTCTCATTACCATGTGCAAAGGATGGG
 
. : . : . : . : . : . :
rJMSF021P18+ AGTCATACGAAGACAATGTGCATTGAGTTGGTTGCTAACCGGTTTTTGCGCAAGATGGTT
rJMSF028E08+ AGATGGTT
rJMSF038H09+ AGTCATACGAAGACAATGTGCATTGAGTTGGTTGCTAACCGGTTTTTGCGCAAGATGGTT
                      ____________________________________________________________
consensus AGTCATACGAAGACAATGTGCATTGAGTTGGTTGCTAACCGGTTTTTGCGCAAGATGGTT
 
. : . : . : . : . : . :
rJMSF021P18+ CGAGTTCTTGTTGCAACAGCAATCAGGGAAGCAGTTGCCGGTGCAGATGAAGATGCATTA
rJMSF028E08+ CGAGTTCTTGTTGCAACAGCAATCAGGGAAGCAGTTGCCGGTGCAGATGAAGATGCATTA
rJMSF038H09+ CGAGTTCTTGTTGCAACAGCAATCAGGGAAGCAGTTGCCGGTGCAGATGAAGATGCATTA
                      ____________________________________________________________
consensus CGAGTTCTTGTTGCAACAGCAATCAGGGAAGCAGTTGCCGGTGCAGATGAAGATGCATTA
 
. : . : . : . : . : . :
rJMSF021P18+ CTGAAGCTGATGGATGCCACTTGCAGGCGCGCCACTGCTCCACCTGCACCACCAGACGGC
rJMSF028E08+ CTGAAGCTGATGGATGCCACTTGAAGGCGCGCCACTGCTCCACCTGCACCACCAGACGGC
rJMSF038H09+ CTGAAGCTGATGGATGCCACTTGCAGGCGCGCCACTGCTCCACCTGCACCACCAGACGGC
                      ____________________________________________________________
consensus CTGAAGCTGATGGATGCCACTTGCAGGCGCGCCACTGCTCCACCTGCACCACCAGACGGC
 
. : . : . : . : . : . :
rJMSF021P18+ CTGTGTCTTGTTGATGTTGGGTATGGGGAGTTTGATCATAACAGCTGTCTGATCCCCTGA
rJMSF028E08+ CTGTGTCTTGTTGATGTTGGATATGGGGAGTTTGATCATAACAGCTGTCTGATCCCCTGA
rJMSF038H09+ CTGTGTCTTGTTGATGTTGGATATGGGGAGTTTGATCATAACAGCTGTCTGATCCCCTGA
                      ____________________________________________________________
consensus CTGTGTCTTGTTGATGTTGGATATGGGGAGTTTGATCATAACAGCTGTCTGATCCCCTGA
 
. : . : . : . : . : . :
rJMSF021P18+ GATCATTGACACAAAGGATGAGGCAAAGAAGTAACAGCATCATATTGGAACAGAAATTGC
rJMSF028E08+ GATCATTGACACAAAGGATGAGGCAAAGAAGTAACAGCATCATATTGGAACAGAAATTGC
rJMSF038H09+ GATCATTGACACAAAGGATGAGGCAAAGAAGTAACAGCATCATATTGGAACAGAAATTGC
                      ____________________________________________________________
consensus GATCATTGACACAAAGGATGAGGCAAAGAAGTAACAGCATCATATTGGAACAGAAATTGC
 
. : . : . : . : . : . :
rJMSF021P18+ AGTGTAATGGGAAGTGAGCAAAAGCAAAGAGAGTCCCATTCCAGTTGTGCTAGGATGATT
rJMSF028E08+ AGTGTAATGGGAAGTGAGCAAAAGCAAAGAGAGTCCCATTCCAGTTGTGCTAGGATGATT
rJMSF038H09+ AGTGTAATGGGAAGTGAGCAAAAGCAAAGAGAGTCCCATTCCAGTTGTGCTAGGATGATT
                      ____________________________________________________________
consensus AGTGTAATGGGAAGTGAGCAAAAGCAAAGAGAGTCCCATTCCAGTTGTGCTAGGATGATT
 
. : . : . : . : . : . :
rJMSF021P18+ TGAACATTGGACCATTTTCATCACTGTCTCTCTTCCCTGTGCCGGTAAGCGGTAACATAG
rJMSF028E08+ TGAACATTGGACCATTTTCATCACTGTCTCTCTTCCCTGTGCCGGTAAGCGGTAACATAG
rJMSF038H09+ TGAACATTGGACCATTTTCATCACTGTCTCTCTTCCCTGTGCCGGTAAGCGGTAACATAG
                      ____________________________________________________________
consensus TGAACATTGGACCATTTTCATCACTGTCTCTCTTCCCTGTGCCGGTAAGCGGTAACATAG
 
. : . : . : . : . : . :
rJMSF021P18+ GAGTTTTTCTTAGAATTTCTACAAATTGTTGTTGATTTATTGTTTCTAGTAACCATTAGT
rJMSF028E08+ GAGTTTTTCTTAGAATTTCTACAAATTGTTGTTGATTTATTGTTTCTAGTAACCATTAGT
rJMSF038H09+ GAGTTTTTCTTAGAATTTCTACAAATTGTTGTTGATTTATTGTTTCTAGTAACCATTAGT
                      ____________________________________________________________
consensus GAGTTTTTCTTAGAATTTCTACAAATTGTTGTTGATTTATTGTTTCTAGTAACCATTAGT
 
. : . : . : . : . : . :
rJMSF021P18+ GGGGACTTGAAAGTTGGAAAGTTGTCTGAATTATTTTAGGAGTTGAGT
rJMSF028E08+ GGGGACTTGAAAGTTGGAAAGTTGTCTGAATTATTTTAGGAGTTGAGT
rJMSF038H09+ GGGGACTTGAAAGTTGGAAAGTTGTCTGAATTATTTTAGGAGTTGAGTTGGTTCTTGAAA
                      ____________________________________________________________
consensus GGGGACTTGAAAGTTGGAAAGTTGTCTGAATTATTTTAGGAGTTGAGTTGGTTCTTGAAA