Contig 014047:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K21Sequence453002119 (7)ref|XP_006434240.1|2e-70hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth221014047 (5)
JMSF007M12Sequence289010294 (9)gb|AAD13812.1|1e-51cysteine proteinase inhibitor [Ipomoea batatas]198014047 (5)
JMSF009M05Sequence388002119 (7)gb|AAM34773.1|AF509873_13e-55nam-like protein 10 [Petunia x hybrida]182014047 (5)
JMSF037N19Sequence604002119 (7)ref|XP_006434240.1|8e-107hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth289014047 (5)
JMSF038N19Sequence505002119 (7)ref|XP_006434240.1|2e-86hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth444014047 (5)

Alignment

This contig is upended


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rJMSF038N19+                                     CNNTTTNNNNTCCNACCCNTTTTAAGGGGGNCC
                      ____________________________________________________________
consensus                                        CNNTTTNNNNTCCNACCCNTTTTAAGGGGGNCC
 
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rJMSF038N19+          CGGGNNCCCCNNNGNCCNGGGGNNGGTTTTTNGGGGGGGNTTNNNCCGNGCCCCNGGGGG
                      ____________________________________________________________
consensus             CGGGNNCCCCNNNGNCCNGGGGNNGGTTTTTNGGGGGGGNTTNNNCCGNGCCCCNGGGGG
 
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rJMSF038N19+          GGGNNNNTTNCAAANTNNAAAGGNNGGNNNTNNCCCCCNTTTTTTTTTTTTNGNNTTNNN
                      ____________________________________________________________
consensus             GGGNNNNTTNCAAANTNNAAAGGNNGGNNNTNNCCCCCNTTTTTTTTTTTTNGNNTTNNN
 
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rJMSF007M12+                                              AAAAAAAAAAAGAGGAGAAGAAAT
rJMSF038N19+          CCNNCCCCNNNTTTTNNNCCCCCAAAAAAAANNCCNAAAAAAAAAAAGNGGNGAAGAAAT
rJMFF012K21+                                              AAAAAAAAAAAGAGGAGAAGAAAT
rJMSF009M05+                                              AAAAAAAAAAAGAGGAGAAGAAAT
rJMSF037N19+                                              AAAAAAAAAAAGNGGNGAAGAAAT
                      ____________________________________________________________
consensus             CCNNCCCCNNNTTTTNNNCCCCCAAAAAAAANNCCNAAAAAAAAAAAGAGGAGAAGAAAT
 
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rJMSF007M12+          ATTTAATTAATTGGAAATTGTGGGATACAGATGGAAACATTTCATTTGTGTAAATATATA
rJMSF038N19+          NTTTAATTAATTGGAAATTGNGGGATACNGATGGAAACNTTTCNTTTGNGTAAATATATA
rJMFF012K21+          ATTTAATTAATTGGAAATTGTGGGATACAGATGGAAACATTTCATTTGTGTAAATATATA
rJMSF009M05+          ATTTAATTAATTGGAAATTGTGGGATACAGATGGAAACATTTCATTTGTGTAAATATATA
rJMSF037N19+          ATTTAATTAATTGGAAATTGTGGGATACNGATGGAAACNTTTCATTTGNGTAAATATATA
                      ____________________________________________________________
consensus             ATTTAATTAATTGGAAATTGTGGGATACAGATGGAAACATTTCATTTGTGTAAATATATA
 
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rJMSF007M12+          GTTGTAATCAAATAGCATAAACTGGTGGCTTCAGTCCTACTCGGTGGGCCCTAGCTTAGC
rJMSF038N19+          GTTGTAATCAAATAGCNTAAACTGGNGGCTTCNGTCCTACTCGGTGGGCCCTAGCTTAGC
rJMFF012K21+          GTTGTAATCAAATAGCATAAACTGGTGGCTTCAGTCCTACTCGGTGGGCCCTAGCTTAGC
rJMSF009M05+          GTTGTAATCAAATAGCATAAACTGGTGGCTTCAGTCCTACTCGGTGGGCCCTAGCTTAGC
rJMSF037N19+          GTTGTAATCAAATAGCNTAAACTGGNGGCTTCNGTCCTACTCGGTGGGCCCTAGCTTAGC
                      ____________________________________________________________
consensus             GTTGTAATCAAATAGCATAAACTGGTGGCTTCAGTCCTACTCGGTGGGCCCTAGCTTAGC
 
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rJMSF007M12+          TACTTGTAATCAAATATTTTCCTAAGGT                                
rJMSF038N19+          TACTTGTAATCAAATATTTTCTTAAGGTAGTTCNTAATTGGGTTTTTGACNCAATATAAT
rJMFF012K21+          TACTTGTAATCAAATATTTTCTTAAGGTAGTTCATAATTGGGTTTTTGACTCAATATAAT
rJMSF009M05+          TACTTGTAATCAAAT                                             
rJMSF037N19+          TACTTGTAATCAAATATTTTCTTAAGGTAGTTCATAATTGGGTTTTTGACNCAATATAAT
                      ____________________________________________________________
consensus             TACTTGTAATCAAATATTTTCTTAAGGTAGTTCATAATTGGGTTTTTGACTCAATATAAT
 
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rJMSF038N19+          TCNATATTTCTATGCAA                                           
rJMSF037N19+          TCAATATTTCTATGCAACTTGCTTGTAGCCTTAATCNCTCTCGNGAGTTTCTCAAAGTAG
                      ____________________________________________________________
consensus             TCAATATTTCTATGCAACTTGCTTGTAGCCTTAATCNCTCTCGNGAGTTTCTCAAAGTAG