Contig 014046:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037G07Sequence659014046 (2)ref|XP_010063221.1|1e-98PREDICTED: ER lumen protein-retaining receptor-like [Eucalyptus grandis] gb|KCW763014046 (2)ref|XP_010920052.1|8e-93PREDICTED: ER lumen protein-retaining receptor-like [Elaeis guineensis]

Alignment

This contig is upended


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JMSF037G07-                                  GAAGCAAAACCGCAAAAGCCCAAAATTGAGCTTCCAT
                      ____________________________________________________________
consensus                                    GAAGCAAAACCGCAAAAGCCCAAAATTGAGCTTCCAT
 
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JMSF037G07-           TTCTGCAACTCAAAACTTAAAACTGCTAGGCGAAAAACATTCAGAGCAAAATGAACATTT
                      ____________________________________________________________
consensus             TTCTGCAACTCAAAACTTAAAACTGCTAGGCGAAAAACATTCAGAGCAAAATGAACATTT
 
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JMSF037G07-           TCCGGTTAGCCGGCGACATGACCCACCTCCTCAGCATCATAGTGCTCCTCCTCAAAATTC
                      ____________________________________________________________
consensus             TCCGGTTAGCCGGCGACATGACCCACCTCCTCAGCATCATAGTGCTCCTCCTCAAAATTC
 
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JMSF037G07-           GTACTAAGAAATCCTGCGCAGGGATTTCATTGAAGACTCAAGAACTTTATGTTATAGTCT
rJMSF037G07+                                           AGACTCAAGAACTTTATGTTATAGTCT
                      ____________________________________________________________
consensus             GTACTAAGAAATCCTGCGCAGGGATTTCATTGAAGACTCAAGAACTTTATGTTATAGTCT
 
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JMSF037G07-           TTCTCACTCGATACCTGGACTTATTTACCAGAGTTTACTCTTTCTACAACACTATAATGA
rJMSF037G07+          TTCTCACTCGATACCTGGACTTATTTACCAGAGTTTACTCTTTCTACAACACTATAATGA
                      ____________________________________________________________
consensus             TTCTCACTCGATACCTGGACTTATTTACCAGAGTTTACTCTTTCTACAACACTATAATGA
 
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JMSF037G07-           AACTAGTCTTTATTGGAACCTCACTCAGTATAGTTTGGTACATGAGGTTCCATAAAGTAG
rJMSF037G07+          AACTAGTCTTTATTGGAACCTCACTCAGTATAGTTTGGTACATGAGGTTCCATAAAGTAG
                      ____________________________________________________________
consensus             AACTAGTCTTTATTGGAACCTCACTCAGTATAGTTTGGTACATGAGGTTCCATAAAGTAG
 
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JMSF037G07-           TCAAGCAAACATACAGCAAGGATCAAGATACTTTCCGACACTATTTTTTGATTGTACCAT
rJMSF037G07+          TCAAGCAAACATACAGCAAGGATCAAGATACTTTCCGACACTATTTTTTGATTGTACCAT
                      ____________________________________________________________
consensus             TCAAGCAAACATACAGCAAGGATCAAGATACTTTCCGACACTATTTTTTGATTGTACCAT
 
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JMSF037G07-           GTTTCCTATTGGCACTTTTGGTTAACCATGAATTCACTGTGATGGAGTTACTTTGGACTT
rJMSF037G07+          GTTTCCTATTGGCACTTTTGGTTAACCATGAATTCACTGTGATGGAGTTACTTTGGACTT
                      ____________________________________________________________
consensus             GTTTCCTATTGGCACTTTTGGTTAACCATGAATTCACTGTGATGGAGTTACTTTGGACTT
 
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JMSF037G07-           TCTCCCTGTATCTTGAAGCAATAGCAATTCTACCTCAGTTGATATTACTGCAACGATCGA
rJMSF037G07+          TCTCCCTGTATCTTGAAGCAATAGCAATTCTACCTCAGTTGATATTACTGCAACGATCGA
                      ____________________________________________________________
consensus             TCTCCCTGTATCTTGAAGCAATAGCAATTCTACCTCAGTTGATATTACTGCAACGATCGA
 
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JMSF037G07-           AGAACATTGACAACTTGACTGGAAGATATATATTTCTTCTTGGTTCTTACCGAGCTTTTT
rJMSF037G07+          AGAACATTGACAACTTGACTGGAAGATATATATTTCTTCTTGGTTCTTACCGAGCTTTTT
                      ____________________________________________________________
consensus             AGAACATTGACAACTTGACTGGAAGATATATATTTCTTCTTGGTTCTTACCGAGCTTTTT
 
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JMSF037G07-           ACATCATCAATTGGATCTATCGTTTCTTTTTGGAAAATCATCAATACCACTGGATCCCTT
rJMSF037G07+          ACATCATCAATTGGATCTATCGTTTCTTTTTGGAAAATCATCAATACCACTGGATCCCTT
                      ____________________________________________________________
consensus             ACATCATCAATTGGATCTATCGTTTCTTTTTGGAAAATCATCAATACCACTGGATCCCTT
 
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JMSF037G07-           GGATTTCTGGCGTTGTTCAGAC                                      
rJMSF037G07+          GGATTTCTGGCGTTGTTCAGACTGCTCTTTATGCTGACTTCTTCTACTATTACATAAAGA
                      ____________________________________________________________
consensus             GGATTTCTGGCGTTGTTCAGACTGCTCTTTATGCTGACTTCTTCTACTATTACATAAAGA
 
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rJMSF037G07+          GCTGGAAGAGCAATGAAAGCCTCAAGCTTCCTGGCTGACTTGTACATTTATCAGTTTGGG
                      ____________________________________________________________
consensus             GCTGGAAGAGCAATGAAAGCCTCAAGCTTCCTGGCTGACTTGTACATTTATCAGTTTGGG
 
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rJMSF037G07+          TTACGATGAAAGGGAAAGGCTGTTCTGCATAAGAGCGATAAAAATCTTGAAGTTTTTGTA
                      ____________________________________________________________
consensus             TTACGATGAAAGGGAAAGGCTGTTCTGCATAAGAGCGATAAAAATCTTGAAGTTTTTGTA
 
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rJMSF037G07+          TCTTCATAGGCTAACTATCCACTCCTCACCCCCTATGCCTTCCCTTTATGGTATCAGCAA
                      ____________________________________________________________
consensus             TCTTCATAGGCTAACTATCCACTCCTCACCCCCTATGCCTTCCCTTTATGGTATCAGCAA
 
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rJMSF037G07+          GCCACAACTTAGAATAATTGCTTTGTTCTATTTTTCAGTGACCAGTGTACTACCAGTTCC
                      ____________________________________________________________
consensus             GCCACAACTTAGAATAATTGCTTTGTTCTATTTTTCAGTGACCAGTGTACTACCAGTTCC