Contig 014043:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS022C07Sequence579014043 (3)ref|XP_006358509.1|9e-47PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum
JMSF037B18Sequence681002494 (6)ref|XP_009622889.1|4e-79PREDICTED: probable glutamate--tRNA ligase, cytoplasmic [Nicotiana tomentosifor735014043 (3)ref|XP_006358509.1|5e-80PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum
JMSF046D15Sequence708002494 (6)ref|XP_009622889.1|3e-83PREDICTED: probable glutamate--tRNA ligase, cytoplasmic [Nicotiana tomentosifor755014043 (3)ref|XP_006358509.1|9e-85PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046D15+ AAAGGAGTTTGGATTGACTATGCCGATGCAGAGTTGATTTC
rJMSF037B18+ TGCAGAGTTGATTTC
                      ____________________________________________________________
consensus AAAGGAGTTTGGATTGACTATGCCGATGCAGAGTTGATTTC
 
. : . : . : . : . : . :
rJMSF046D15+ TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
rJMSF037B18+ TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
                      ____________________________________________________________
consensus TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
 
. : . : . : . : . : . :
rJMSF046D15+ AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
rJMSF037B18+ AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
                      ____________________________________________________________
consensus AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
 
. : . : . : . : . : . :
rJMSF046D15+ GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
JMFS022C07- ATGAACTTTTGAAGCTCTCTTT
rJMSF037B18+ GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
                      ____________________________________________________________
consensus GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
 
. : . : . : . : . : . :
rJMSF046D15+ GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
JMFS022C07- GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
rJMSF037B18+ GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
                      ____________________________________________________________
consensus GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
 
. : . : . : . : . : . :
rJMSF046D15+ CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
JMFS022C07- CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGATAGA
rJMSF037B18+ CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
                      ____________________________________________________________
consensus CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
 
. : . : . : . : . : . :
rJMSF046D15+ CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
JMFS022C07- CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGTCTACTTCAGATGCGACGTTCC
rJMSF037B18+ CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
                      ____________________________________________________________
consensus CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
 
. : . : . : . : . : . :
rJMSF046D15+ CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
JMFS022C07- CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
rJMSF037B18+ CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
                      ____________________________________________________________
consensus CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
 
. : . : . : . : . : . :
rJMSF046D15+ TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
JMFS022C07- TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
rJMSF037B18+ TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
                      ____________________________________________________________
consensus TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
 
. : . : . : . : . : . :
rJMSF046D15+ TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
JMFS022C07- TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATTAACG
rJMSF037B18+ TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
                      ____________________________________________________________
consensus TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
 
. : . : . : . : . : . :
rJMSF046D15+ TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
JMFS022C07- TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
rJMSF037B18+ TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
                      ____________________________________________________________
consensus TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
 
. : . : . : . : . : . :
rJMSF046D15+ AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
JMFS022C07- AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
rJMSF037B18+ AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
                      ____________________________________________________________
consensus AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
 
. : . : . : . : . : . :
rJMSF046D15+ CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTAT
JMFS022C07- CTGTGTTAATTTTGATACATTTTGTTGACAGANAACAAGGGATTCATTATGTAT
rJMSF037B18+ CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTATGACCAT
                      ____________________________________________________________
consensus CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTATGACCAT