| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS022C07 | Sequence | 579 | 014043 (3) | ref|XP_006358509.1| | 9e-47 | PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum | |||||
| JMSF037B18 | Sequence | 681 | 002494 (6) | ref|XP_009622889.1| | 4e-79 | PREDICTED: probable glutamate--tRNA ligase, cytoplasmic [Nicotiana tomentosifor | 735 | 014043 (3) | ref|XP_006358509.1| | 5e-80 | PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum |
| JMSF046D15 | Sequence | 708 | 002494 (6) | ref|XP_009622889.1| | 3e-83 | PREDICTED: probable glutamate--tRNA ligase, cytoplasmic [Nicotiana tomentosifor | 755 | 014043 (3) | ref|XP_006358509.1| | 9e-85 | PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like [Solanum tuberosum |
This contig is upended
. : . : . : . : . : . :
rJMSF046D15+ AAAGGAGTTTGGATTGACTATGCCGATGCAGAGTTGATTTC
rJMSF037B18+ TGCAGAGTTGATTTC
____________________________________________________________
consensus AAAGGAGTTTGGATTGACTATGCCGATGCAGAGTTGATTTC
. : . : . : . : . : . :
rJMSF046D15+ TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
rJMSF037B18+ TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
____________________________________________________________
consensus TGTTGATGAAGAAGTCACTTTAATGGATTGGGGTAATGCTATTGTGAAGAGTATAGAAAA
. : . : . : . : . : . :
rJMSF046D15+ AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
rJMSF037B18+ AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
____________________________________________________________
consensus AGATCAGCAGGGGAATGTTGTAAATTTGACTGGGGTGCTGCATCTTGAAGGCTCTGTGAA
. : . : . : . : . : . :
rJMSF046D15+ GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
JMFS022C07- ATGAACTTTTGAAGCTCTCTTT
rJMSF037B18+ GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
____________________________________________________________
consensus GACTACCAAATTGAAGCTCACTTGGCTTCCTCATACAAATGAACTTTTGAAGCTCTCTTT
. : . : . : . : . : . :
rJMSF046D15+ GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
JMFS022C07- GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
rJMSF037B18+ GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
____________________________________________________________
consensus GGTTGATTTTGACTATTTAATCACCAAAAAGAAGCTTGAGGAAAATGAAGATTTCGTTGA
. : . : . : . : . : . :
rJMSF046D15+ CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
JMFS022C07- CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGATAGA
rJMSF037B18+ CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
____________________________________________________________
consensus CGTTGTCAACCCCTGCACAAAAAAGGAGACTTGTGCGTTTGGGGATGCAAACATGAGAGA
. : . : . : . : . : . :
rJMSF046D15+ CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
JMFS022C07- CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGTCTACTTCAGATGCGACGTTCC
rJMSF037B18+ CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
____________________________________________________________
consensus CTTGAAGAGAGGTGATATATTGCAGTTGGAGAGAAAAGGCTACTTCAGATGCGACGTTCC
. : . : . : . : . : . :
rJMSF046D15+ CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
JMFS022C07- CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
rJMSF037B18+ CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
____________________________________________________________
consensus CTTTGTCAGGACAACAGACCCAATTGTTCTCTTTGCCATTCCAGATGGAAAACAGCAACC
. : . : . : . : . : . :
rJMSF046D15+ TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
JMFS022C07- TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
rJMSF037B18+ TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
____________________________________________________________
consensus TGTAATGAGGTTTGCAGCACCAGATGCCAAACACCAATGAATTACTGACTCACTCACGAC
. : . : . : . : . : . :
rJMSF046D15+ TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
JMFS022C07- TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATTAACG
rJMSF037B18+ TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
____________________________________________________________
consensus TGCAGACGTACTGGTGCCAGCTACGTTGAATGTATGAACACGAAAGGAGATTCATCAACG
. : . : . : . : . : . :
rJMSF046D15+ TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
JMFS022C07- TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
rJMSF037B18+ TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
____________________________________________________________
consensus TAACTTGGAATTTTGTTGTTGCTAGAAATGCATGAGATCGAATTCACTAATTTACCAATT
. : . : . : . : . : . :
rJMSF046D15+ AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
JMFS022C07- AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
rJMSF037B18+ AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
____________________________________________________________
consensus AATGATTTCGAATTTGAGTAATTCTTAGCTTGTTATTGATCTCTGATCGAGTCTCCATAT
. : . : . : . : . : . :
rJMSF046D15+ CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTAT
JMFS022C07- CTGTGTTAATTTTGATACATTTTGTTGACAGANAACAAGGGATTCATTATGTAT
rJMSF037B18+ CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTATGACCAT
____________________________________________________________
consensus CTGTGTTAATTTTGATACATTTTGTTGACAGAAAACAAGGGATTCATTATGTATGACCAT