Contig 014040:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021J10+                                     AAAGGGAAGTGGAAGAGAATACCCGTAGAGTGA
                      ____________________________________________________________
consensus                                        AAAGGGAAGTGGAAGAGAATACCCGTAGAGTGA
 
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rJMSF021J10+          AGGAGAGTATGCAGACTGCCGCGAATGGCAAATATGTTCAAAGAGCTAACAGTATTAAAG
                      ____________________________________________________________
consensus             AGGAGAGTATGCAGACTGCCGCGAATGGCAAATATGTTCAAAGAGCTAACAGTATTAAAG
 
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rJMSF021J10+          AAGAACATGACAGCAGCCCCCGAGGAGGTGTTAGAGGGCCTGTTGTATTAGATTCTAGTG
                      ____________________________________________________________
consensus             AAGAACATGACAGCAGCCCCCGAGGAGGTGTTAGAGGGCCTGTTGTATTAGATTCTAGTG
 
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rJMSF021J10+          GAAAGGACTTTTCATCAACCCCTTCAGAGAATTTTGTTGGAAATGCTGTAGACAATTGGG
                      ____________________________________________________________
consensus             GAAAGGACTTTTCATCAACCCCTTCAGAGAATTTTGTTGGAAATGCTGTAGACAATTGGG
 
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rJMSF021J10+          ATGTTAGTGGATTTATTGGTGCTGATTTACTCTCTGAATCTGAGAAACAGCTGTGTGGTG
rJMSF036K17+                                                                  GGTG
                      ____________________________________________________________
consensus             ATGTTAGTGGATTTATTGGTGCTGATTTACTCTCTGAATCTGAGAAACAGCTGTGTGGTG
 
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rJMSF021J10+          AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
rJMSF036K17+          AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
                      ____________________________________________________________
consensus             AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
 
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rJMSF021J10+          TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
rJMSF036K17+          TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
                      ____________________________________________________________
consensus             TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
 
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rJMSF021J10+          AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
rJMSF036K17+          AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
                      ____________________________________________________________
consensus             AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
 
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rJMSF021J10+          ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
rJMSF036K17+          ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
                      ____________________________________________________________
consensus             ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
 
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rJMSF021J10+          TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
rJMSF036K17+          TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
                      ____________________________________________________________
consensus             TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
 
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rJMSF021J10+          GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
rJMSF036K17+          GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
                      ____________________________________________________________
consensus             GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
 
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rJMSF021J10+          ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
rJMSF036K17+          ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
                      ____________________________________________________________
consensus             ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
 
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rJMSF021J10+          ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
rJMSF036K17+          ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
                      ____________________________________________________________
consensus             ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
 
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rJMSF021J10+          TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATG      
rJMSF036K17+          TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATGTAACTA
                      ____________________________________________________________
consensus             TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATGTAACTA
 
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rJMSF036K17+          TTTAATCCCTGCTGTTCTAGTTCTCATTTAGGTGCCTGTTTCCACTTTGTTAAGAGTGTT
                      ____________________________________________________________
consensus             TTTAATCCCTGCTGTTCTAGTTCTCATTTAGGTGCCTGTTTCCACTTTGTTAAGAGTGTT
 
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rJMSF036K17+          TTCCTTTCAGCTGAACAGAGATTCTAAAACAGCAGATATGAACAAGCCACAAGTACAACC
                      ____________________________________________________________
consensus             TTCCTTTCAGCTGAACAGAGATTCTAAAACAGCAGATATGAACAAGCCACAAGTACAACC