Contig 014040:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021J10Sequence707010680 (2)ref|XP_009598900.1|1e-49PREDICTED: transcriptional adapter ADA2-like isoform X4 [Nicotiana tomentosifor807014040 (2)ref|XP_009608211.1|5e-60PREDICTED: transcriptional adapter ADA2-like isoform X3 [Nicotiana tomentosifor
JMSF036K17Sequence591010680 (2)ref|XP_009598900.1|4e-22PREDICTED: transcriptional adapter ADA2-like isoform X4 [Nicotiana tomentosifor664014040 (2)emb|CDP17436.1|4e-21unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021J10+ AAAGGGAAGTGGAAGAGAATACCCGTAGAGTGA
                      ____________________________________________________________
consensus AAAGGGAAGTGGAAGAGAATACCCGTAGAGTGA
 
. : . : . : . : . : . :
rJMSF021J10+ AGGAGAGTATGCAGACTGCCGCGAATGGCAAATATGTTCAAAGAGCTAACAGTATTAAAG
                      ____________________________________________________________
consensus AGGAGAGTATGCAGACTGCCGCGAATGGCAAATATGTTCAAAGAGCTAACAGTATTAAAG
 
. : . : . : . : . : . :
rJMSF021J10+ AAGAACATGACAGCAGCCCCCGAGGAGGTGTTAGAGGGCCTGTTGTATTAGATTCTAGTG
                      ____________________________________________________________
consensus AAGAACATGACAGCAGCCCCCGAGGAGGTGTTAGAGGGCCTGTTGTATTAGATTCTAGTG
 
. : . : . : . : . : . :
rJMSF021J10+ GAAAGGACTTTTCATCAACCCCTTCAGAGAATTTTGTTGGAAATGCTGTAGACAATTGGG
                      ____________________________________________________________
consensus GAAAGGACTTTTCATCAACCCCTTCAGAGAATTTTGTTGGAAATGCTGTAGACAATTGGG
 
. : . : . : . : . : . :
rJMSF021J10+ ATGTTAGTGGATTTATTGGTGCTGATTTACTCTCTGAATCTGAGAAACAGCTGTGTGGTG
rJMSF036K17+ GGTG
                      ____________________________________________________________
consensus ATGTTAGTGGATTTATTGGTGCTGATTTACTCTCTGAATCTGAGAAACAGCTGTGTGGTG
 
. : . : . : . : . : . :
rJMSF021J10+ AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
rJMSF036K17+ AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
                      ____________________________________________________________
consensus AGATCAGAATTTTGCCTACACATTATCTAAACATTCTGGAAACCCTGTCTACAGGCATTT
 
. : . : . : . : . : . :
rJMSF021J10+ TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
rJMSF036K17+ TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
                      ____________________________________________________________
consensus TAGGTGGCAATATCACAAAGAAAAGTGATGCACATGGTCTCTTTAATGTCGATCCAAGCA
 
. : . : . : . : . : . :
rJMSF021J10+ AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
rJMSF036K17+ AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
                      ____________________________________________________________
consensus AGGTGGACAGGGTTTATGATGTTCTCGTCAAAAAAGGGTTTGCTCCAGCATGATGCTATC
 
. : . : . : . : . : . :
rJMSF021J10+ ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
rJMSF036K17+ ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
                      ____________________________________________________________
consensus ATTTTGATCATATCGAAGGTTATCACGAGGTAATTCAAAAGTGTTGCTGAAGAATTGGTG
 
. : . : . : . : . : . :
rJMSF021J10+ TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
rJMSF036K17+ TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
                      ____________________________________________________________
consensus TTAAATAGCCAATTGTGTGCTTCAAGTGAAAGATTGGCAGGTATGGAGCTACTTGTTATA
 
. : . : . : . : . : . :
rJMSF021J10+ GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
rJMSF036K17+ GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
                      ____________________________________________________________
consensus GAGCAGTGATACTAAATAATGACAGTCACAGAATGGACAATTTGATACACATTATTGTTT
 
. : . : . : . : . : . :
rJMSF021J10+ ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
rJMSF036K17+ ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
                      ____________________________________________________________
consensus ACTTATAGGACTTAGGTAGCATATAGATTGTATTGATAGTATGTTAAGTTATTCTGACAG
 
. : . : . : . : . : . :
rJMSF021J10+ ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
rJMSF036K17+ ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
                      ____________________________________________________________
consensus ACAACAGGACATTTAGGTTGCACCCAAGGCCTAGTAAATGTGCTAGGGTGCAACATCAGA
 
. : . : . : . : . : . :
rJMSF021J10+ TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATG
rJMSF036K17+ TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATGTAACTA
                      ____________________________________________________________
consensus TGGGCACTTGGGATGTTGTGTTTGGCTGTGCAGAAGAGGAGCACTGTAAATATGTAACTA
 
. : . : . : . : . : . :
rJMSF036K17+ TTTAATCCCTGCTGTTCTAGTTCTCATTTAGGTGCCTGTTTCCACTTTGTTAAGAGTGTT
                      ____________________________________________________________
consensus TTTAATCCCTGCTGTTCTAGTTCTCATTTAGGTGCCTGTTTCCACTTTGTTAAGAGTGTT
 
. : . : . : . : . : . :
rJMSF036K17+ TTCCTTTCAGCTGAACAGAGATTCTAAAACAGCAGATATGAACAAGCCACAAGTACAACC
                      ____________________________________________________________
consensus TTCCTTTCAGCTGAACAGAGATTCTAAAACAGCAGATATGAACAAGCCACAAGTACAACC