Contig 014039:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002D10+                    CAAATTTGAAGTGATGGTTCTGCTTAAAGCCCCAGTTTCAAGTCATGCAA
rJMSF010C13+                CTGTCAAATTTGAAGTGATGGTTCTGCTTAAAGCCCCAGTTTCAAGTCATGCAA
rJMSF035O15+                    CAAATTTGAAGTGATGGTTCTGCTTAAAGCCCCAGTTNCAAGTCATGCAA
                      ____________________________________________________________
consensus                   CTGTCAAATTTGAAGTGATGGTTCTGCTTAAAGCCCCAGTTTCAAGTCATGCAA
 
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rJMSF002D10+          TGATCACATATAAATGTCAGTCTTTTTTCTTTGATAGTAGCATGATTGTTGTTGTTTTTT
rJMSF010C13+          TGATCACATATAAATGTCAGTCTTTTTTCTTTGATAGTAGCATGATTGTTGTTGTTTTTT
rJMSF035O15+          TGATCACATATAAATGTCAGTCTTTTTTCTTTGATAGTAGCATGATTGTTGTTGTTTTTT
                      ____________________________________________________________
consensus             TGATCACATATAAATGTCAGTCTTTTTTCTTTGATAGTAGCATGATTGTTGTTGTTTTTT
 
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rJMSF002D10+          TCATACTTTTTGCCCGTAACACCCAATATTACCCTGCAGTGAGATTTGACTCAGGGTATG
rJMSF010C13+          TCATACTTTTTGCCCGTAACACCCAATATTACCCTGCAGTGAGATTTGACTCAGGGTATG
rJMSF046M01+                                            TGCAGTGAGATTTGACTCAGGGTATG
rJMSF035O15+          TCATACTTTTTGCCCGTAACACCCAATATTACCCTGCAGTGAGATTTGACTCAGGGTATG
                      ____________________________________________________________
consensus             TCATACTTTTTGCCCGTAACACCCAATATTACCCTGCAGTGAGATTTGACTCAGGGTATG
 
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rJMSF002D10+          CCACAAAAGTTTGATTCGCTTATTAATGGAAGGCTTAGTCCATAGCTTTCTTTAACATGG
rJMSF010C13+          CCACAAAAGTTTGATTCGCTTATTAATGGAAGGCTTAGTCCATAGCTTTCTTTAACATGG
rJMSF046M01+          CCACAAAAGTTTGATTCGCTTATTAATGGAAGGCTTAGTCCATAGCTTTCTNTAACATGG
rJMSF035O15+          CCACAAAAGTTTGATTCGCTTATTAATGGAAGGCTTAGTCCATAGCTTTCTTTAACATGG
                      ____________________________________________________________
consensus             CCACAAAAGTTTGATTCGCTTATTAATGGAAGGCTTAGTCCATAGCTTTCTTTAACATGG
 
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rJMSF002D10+          TGGTCGGTCTTCGGACCTTGCAATTACATTAGTAACAGTAACTTGGTTCTTCCCATCCCT
rJMSF010C13+          TGGTCGGTCTTCGGACCTTGCAATTACATTAGTAACAGTAACTTGGTTCTTCCCATCCCT
rJMSF046M01+          TGGTCGGTCTTCGGACCTTGCAATTACATTAGTAACAGTAACTTGGTTCTTCCCATCCCT
rJMSF035O15+          TGGTCGGTCTTCGGACCTTGCAATTACATTAGTAACAGTAACTTGGTTCTTCCCATCCCT
                      ____________________________________________________________
consensus             TGGTCGGTCTTCGGACCTTGCAATTACATTAGTAACAGTAACTTGGTTCTTCCCATCCCT
 
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rJMSF002D10+          AATCTTGTAATTAGACTGCAGTCCTAAAGATTTTGACAGAATATCTTTGAAGAAGTATGC
rJMSF010C13+          AATCTTGTAATTAGACTGCAGTCCTAAAGATTTTGACAGAATATCTTTGAAGAAGTATGC
rJMSF046M01+          AATCTNGTAATTAGACTGCAGTCCTAAAGATTTTGACAGAATATCTTNGAAGAAGTANGC
rJMSF035O15+          AATCTTGTAATTAGACTGCAGTCCTAAAGATTTTGACAGAATATCTTTGAAGAAGTATGC
                      ____________________________________________________________
consensus             AATCTTGTAATTAGACTGCAGTCCTAAAGATTTTGACAGAATATCTTTGAAGAAGTATGC
 
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rJMSF002D10+          CATGTTCTAGGGCAAATGCTAGCATCCAGCATTCAAGAGAATACAGAGATGATCAACACT
rJMSF010C13+          CATGTTCTAGGGCAAATGCTAGCATCCAGCATTCAAGAGAATACAGAGATGATCAACACT
rJMSF046M01+          CATGTTCTAGGGCAAATGCTAGCATCCAGCATTCAAGAGAATNCAGAGATGATCAACACT
rJMSF035O15+          CATGTTCTAGGGCAAATGCTAGCATCCAGCATTCAAGAGAATACAGAGATGATCAACACT
                      ____________________________________________________________
consensus             CATGTTCTAGGGCAAATGCTAGCATCCAGCATTCAAGAGAATACAGAGATGATCAACACT
 
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rJMSF002D10+          CCAATACTTCAGAGAGCTTCACCCCTTTGCAGCGGAACCTAAAGTGGGCATATCCCACAC
rJMSF010C13+          CCAATACTTCAGAGAGCTTCACCCCTTTGCAGCGGAACCTAAAGTGGGCATATCCCACAC
rJMSF046M01+          CCAATACTTCAGAGAGCTTCACCCCTTTGCAGCGGAACCTAAAGTGGGCATATCCCACAC
rJMSF035O15+          CCAATACTTCAGAGAGCTTCACCCCTTTGCAGCGGAACCTAAAGTGGGCATATCCCACAC
                      ____________________________________________________________
consensus             CCAATACTTCAGAGAGCTTCACCCCTTTGCAGCGGAACCTAAAGTGGGCATATCCCACAC
 
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rJMSF002D10+          TGGCCTTGTCTGAGTCATTGAGTCACCGTGATCTTTCCAAATGGGCCGAGGTGTGGAGGG
rJMSF010C13+          TGGCCTTGTCTGAGTCATTGAGTCACCGTGATCTTTCCAAATGGGCCGAGGTGTGGAGGG
rJMSF046M01+          TGGCCTTGTCTGAGTCATTGAGTCACCGTGATCTTTCCAAATGGGCCGAGGTGTGGAGGG
rJMSF035O15+          TGGCCTTGTCTGAGTCATTGAGTCACCGTGATCTTTCCAAATGGGCCGAGGTGTGGAGGG
                      ____________________________________________________________
consensus             TGGCCTTGTCTGAGTCATTGAGTCACCGTGATCTTTCCAAATGGGCCGAGGTGTGGAGGG
 
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rJMSF002D10+          TGCTTTCGGTTGGGGATTCAACTTTTGGGAGAAGAGAGCTTCACCCCTTGCTCACCTTGG
rJMSF010C13+          TGCTTTCGGTTGGGGATTCAACTTTTGGGAGAAGAGAGCTTCACCCCTTGCTCACCTTGG
rJMSF046M01+          TGCTTTCGGTTGGGGATTCAACTTTTGGGAGAAGAGAGCTTCACCCCTTGCTCACCTTGG
rJMSF035O15+          TGCTTTCGGTTGGGGATTCAACTTTTGGGAGAAGAGAGCTTCACCCCTTGCTCACCTTGG
                      ____________________________________________________________
consensus             TGCTTTCGGTTGGGGATTCAACTTTTGGGAGAAGAGAGCTTCACCCCTTGCTCACCTTGG
 
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rJMSF002D10+          GCAGTGGATGTGAGTTTTCTGTAAATCAAGGGGATGAGATATGAGTGTCACTTCAACACA
rJMSF010C13+          GCAGTGGATGTGAGTTTTCTGTAAATCAAGGGGATGAGATATGAGTGTCACTTCAACACA
rJMSF046M01+          GCAGTGGATGTGAGTTTTCTGTAAATCAAGGGGATGAG--ATGAGTGTCACTTCAACACA
rJMSF035O15+          GCAGTGGATGTGAGTTTTCTGTAAATCAAGGGGATGAGATATGAGTGTCACTTCAACACA
                      ____________________________________________________________
consensus             GCAGTGGATGTGAGTTTTCTGTAAATCAAGGGGATGAGATATGAGTGTCACTTCAACACA
 
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rJMSF002D10+          ATATAGGGATGGGTCTTGGATTTTAATC-ACTACCCGTTTATTTTATATGAAAAATGTTA
rJMSF010C13+          ATATAGGGATGGGTCTTGGATTTTAATC-ACTACCCGTTTATTTTATATGAAAAATGTTA
rJMSF046M01+          ATATAGGGANGGGTCTTGGATTTTAATCAACTACCCGTTTATTTTATATGAAAAATGTTA
rJMSF035O15+          ATATAGGGATGGGTCTTGGATTTTAATC-ACTACCCGTTTATTTTATATGAAAAATGTTA
                      ____________________________________________________________
consensus             ATATAGGGATGGGTCTTGGATTTTAATC-ACTACCCGTTTATTTTATATGAAAAATGTTA
 
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rJMSF002D10+          TGTATT                                                      
rJMSF010C13+          TGTATTATGAACTA                                              
rJMSF046M01+          TGTATTATGAACTATACTTGTTTGATAAACTTAATTTGAAATGNGTTTGTAGCATCTCT 
rJMSF035O15+          TGTATTATGAACTATACTTGTTTGATAAACTTAATTTGAAATGTGTTTGTAGCATCTCTT
                      ____________________________________________________________
consensus             TGTATTATGAACTATACTTGTTTGATAAACTTAATTTGAAATGTGTTTGTAGCATCTCTT