Contig 014034:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF035C11-                                                          GGGAAAACATTAG
                      ____________________________________________________________
consensus                                                            GGGAAAACATTAG
 
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JMSF035C11-           GTGCTCTCGCAGTCATGTTCTTCCACCAAGGAAGGGAAGCATGTGCAATGAAAAATGAAC
rJMSF035C11+              TCTCGCAGTCATGTTCTTCCNCCAAGGAAGGGAAGCATGTGCAATGAAAAATGAAC
                      ____________________________________________________________
consensus             GTGCTCTCGCAGTCATGTTCTTCCACCAAGGAAGGGAAGCATGTGCAATGAAAAATGAAC
 
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JMSF035C11-           CCACTTGTCTTCTCTTTATGATGTATGCCAAATACATATAAGCTTCTTAATTTTTTTTTT
rJMSF035C11+          CCNCTTGTCTTCTCTTTATGATGTATGCCAAATACATATAAGCTTCTTAATTTTTTTTTT
                      ____________________________________________________________
consensus             CCACTTGTCTTCTCTTTATGATGTATGCCAAATACATATAAGCTTCTTAATTTTTTTTTT
 
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JMSF035C11-           CTTTTTCTGCANGTCNCTTTTCAATCANAAATTCTGATTTATGGCCTTTGTCCTAANAGG
rJMSF035C11+          CTTTTTCTGCATGTCTCTTTTCAATCAGAAATTCTGATTTATGGCCTTTGTCCTAAGAGG
                      ____________________________________________________________
consensus             CTTTTTCTGCATGTCTCTTTTCAATCAGAAATTCTGATTTATGGCCTTTGTCCTAAGAGG
 
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JMSF035C11-           AAATTTTGGGGTCTTCAATGATCTGGAGGAAGTTCACAGTAAATTTTTTATGGATTANAG
rJMSF035C11+          AAATTTTGGGGTCTTCAATGATCTGGAGGAAGTTCACAGTAAATTTTTTATGGATTAGAG
                      ____________________________________________________________
consensus             AAATTTTGGGGTCTTCAATGATCTGGAGGAAGTTCACAGTAAATTTTTTATGGATTAGAG
 
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JMSF035C11-           CCACTTTAAAATGATATAAAAGAGAATAANGATAATTACTTCTNGGTTCTTTTCTTTGNG
rJMSF035C11+          CCACTTTAAAATGATATAAAAGAGAATAATGATAATTACTTCTTGGTTCTTTTCTTTGTG
                      ____________________________________________________________
consensus             CCACTTTAAAATGATATAAAAGAGAATAATGATAATTACTTCTTGGTTCTTTTCTTTGTG
 
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JMSF035C11-           CTTCAATGTANATGTGTGGGTCTCACCATGGAACATGTATTTATAGGCACAACTTCTCAC
rJMSF035C11+          CTTCAATGTAGATGTGTGGGTCTCACCATGGAACATGTATTTATAGGCACAACTTCTCAC
                      ____________________________________________________________
consensus             CTTCAATGTAGATGTGTGGGTCTCACCATGGAACATGTATTTATAGGCACAACTTCTCAC
 
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JMSF035C11-           AAAAATTCAGTTTCAAAAATGAATCATTATTTTTAGATGCCNGTTTTCGAAAACTAAATA
rJMSF035C11+          AAAAATTCAGTTTCAAAAATGAATCATTATTTTTAGATGCCTGTTTTCGAAAACTAAATA
                      ____________________________________________________________
consensus             AAAAATTCAGTTTCAAAAATGAATCATTATTTTTAGATGCCTGTTTTCGAAAACTAAATA
 
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JMSF035C11-           TTACATTGGCAAATTAAATAAACCATTTTGCTATAGNGATCTCCATTTTTATACATTTTT
rJMSF035C11+          TTACATTGGCAAATTAAATAAACCATTTTGCTATAGTGATCTCCATTTTTATACATTTTT
                      ____________________________________________________________
consensus             TTACATTGGCAAATTAAATAAACCATTTTGCTATAGTGATCTCCATTTTTATACATTTTT
 
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JMSF035C11-           CCAGATTCATAAATCAATTTTTTATTTCATATACAAAATTACATTTTTAAAAAAAATTAA
rJMSF035C11+          CCAGATTCATAAATCAATTTTTTATTTCATATACAAAATTACATTTTTAAAAAAAATTAA
                      ____________________________________________________________
consensus             CCAGATTCATAAATCAATTTTTTATTTCATATACAAAATTACATTTTTAAAAAAAATTAA
 
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JMSF035C11-           TTCAAACATATGTTAAGGAGAAATATAGGACTTTTTGGATTAATCTAAAGACATACTTAA
rJMSF035C11+          TTCAAACATATGTTAAGGAGAAATATAGGACTTTTTGGATTAATCTAAAGACATACTTAA
                      ____________________________________________________________
consensus             TTCAAACATATGTTAAGGAGAAATATAGGACTTTTTGGATTAATCTAAAGACATACTTAA
 
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JMSF035C11-           TTCTGTTTTTTTTTCCCAAAAAATAAATCTTTAA                          
rJMSF035C11+          TTCTGTTTTTTTTTCCCAAAAAATAAATCTTTAAGTTTTCTTGTTTATTTACATAATCCT
                      ____________________________________________________________
consensus             TTCTGTTTTTTTTTCCCAAAAAATAAATCTTTAAGTTTTCTTGTTTATTTACATAATCCT