Contig 014033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034P14Sequence660014033 (2)ref|XP_009605219.1|2e-97PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Nicotiana tome717014033 (2)ref|XP_009605219.1|2e-95PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Nicotiana tome

Alignment

This contig is upended


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JMSF034P14-                                                              GGAATTCCG
                      ____________________________________________________________
consensus                                                                GGAATTCCG
 
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JMSF034P14-           ACAAAGCTTCTGCCCAGCTTCGTGCCTTCCTCTCTTCCTTCCTTCACCGGCAGAACCGCA
                      ____________________________________________________________
consensus             ACAAAGCTTCTGCCCAGCTTCGTGCCTTCCTCTCTTCCTTCCTTCACCGGCAGAACCGCA
 
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JMSF034P14-           GAAACGACGCAGAACTGCAGTCCGTGAGCCACTCCGGTGTGTTGCAGCCAGAAACGACGT
                      ____________________________________________________________
consensus             GAAACGACGCAGAACTGCAGTCCGTGAGCCACTCCGGTGTGTTGCAGCCAGAAACGACGT
 
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JMSF034P14-           CGCACTCCGGTGCGTCGAGCATCTCCGTCGCACTCCGTCCACAGCCAGGAAATAGAAGGA
                      ____________________________________________________________
consensus             CGCACTCCGGTGCGTCGAGCATCTCCGTCGCACTCCGTCCACAGCCAGGAAATAGAAGGA
 
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JMSF034P14-           ATCCAATATGAGGCCATTGGATGAGAGTGAGACCACCCAAGTTTTTGAAAAGCTCTTTAA
                      ____________________________________________________________
consensus             ATCCAATATGAGGCCATTGGATGAGAGTGAGACCACCCAAGTTTTTGAAAAGCTCTTTAA
 
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JMSF034P14-           ATTTGTGGGAAACAATCTGAAGAACATTGTGGATAGCCCATCTCATGAAGGTCCCGACCC
                      ____________________________________________________________
consensus             ATTTGTGGGAAACAATCTGAAGAACATTGTGGATAGCCCATCTCATGAAGGTCCCGACCC
 
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JMSF034P14-           AGCTCCAGGGCGGTACTGTTTCCGTCTCCAAAGGAATCGAGTCTACTATGTGTCGGAGTC
rJMSF034P14+             TCCAGGGCGGTACTGTTTCCGTCTCCAAAGGAATCGAGTCTACTATGTGTCGGAGTC
                      ____________________________________________________________
consensus             AGCTCCAGGGCGGTACTGTTTCCGTCTCCAAAGGAATCGAGTCTACTATGTGTCGGAGTC
 
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JMSF034P14-           CCTCGTGAAGAGAGCCACTAACGTAAAACGAGATAATCTGATCTCGCTGGGGACCCAAAT
rJMSF034P14+          CCTCGTGAAGAGAGCCACTAACGTAAAACGAGATAATCTGATCTCGCTGGGGACCCAAAT
                      ____________________________________________________________
consensus             CCTCGTGAAGAGAGCCACTAACGTAAAACGAGATAATCTGATCTCGCTGGGGACCCAAAT
 
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JMSF034P14-           AGGGAAATTCACTAAAGGAGGCAAGTTTCACCTAACAATCCAGTCGCTGAATTTGATAGC
rJMSF034P14+          AGGGAAATTCACTAAAGGAGGCAAGTTTCACCTAACAATCCAGTCGCTGAATTTGATAGC
                      ____________________________________________________________
consensus             AGGGAAATTCACTAAAGGAGGCAAGTTTCACCTAACAATCCAGTCGCTGAATTTGATAGC
 
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JMSF034P14-           TGCACATGCAAAACACAAAGTTTGGCTAAAACCCACGTCTGAGATGAGCTTCCTATACGG
rJMSF034P14+          TGCACATGCAAAACACAAAGTTTGGCTAAAACCCACGTCTGAGATGAGCTTCCTATACGG
                      ____________________________________________________________
consensus             TGCACATGCAAAACACAAAGTTTGGCTAAAACCCACGTCTGAGATGAGCTTCCTATACGG
 
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JMSF034P14-           AAACAATGTGTTGAAAGGTGGTGTCGGTAGGATAACAGAGAATGTCAACGAGCATGATGG
rJMSF034P14+          AAACAATGTGTTGAAAGGTGGTGTCGGTAGGATAACAGAGAATGTCAACGAGCATGATGG
                      ____________________________________________________________
consensus             AAACAATGTGTTGAAAGGTGGTGTCGGTAGGATAACAGAGAATGTCAACGAGCATGATGG
 
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JMSF034P14-           GGTTGTGGTGTTCTCGATGTCCGATGTGCCACTGGGATTCGGCGTTGCTGC         
rJMSF034P14+          GGTTGTGGTGTTCTCGATGTCCGATGTGCCACTGGGATTCGGCGTTGCTGCTAAGAGTAC
                      ____________________________________________________________
consensus             GGTTGTGGTGTTCTCGATGTCCGATGTGCCACTGGGATTCGGCGTTGCTGCTAAGAGTAC
 
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rJMSF034P14+          ACAAGATTGTAGGAAGCTGGATCCTAATGGGAATGTGGTGTTGCACCAATCTGATATTGG
                      ____________________________________________________________
consensus             ACAAGATTGTAGGAAGCTGGATCCTAATGGGAATGTGGTGTTGCACCAATCTGATATTGG
 
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rJMSF034P14+          GGAGTACCTGAGGATGGAGGATGAACTTTAAAACCGGAAAAGATTACCGCTTGAATTGGT
                      ____________________________________________________________
consensus             GGAGTACCTGAGGATGGAGGATGAACTTTAAAACCGGAAAAGATTACCGCTTGAATTGGT
 
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rJMSF034P14+          TCAGTTTGTGGGTTAAGTCTTCATTTGGGAAATCATCTTTGCAACATTCCAGTGTAAATC
                      ____________________________________________________________
consensus             TCAGTTTGTGGGTTAAGTCTTCATTTGGGAAATCATCTTTGCAACATTCCAGTGTAAATC
 
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rJMSF034P14+          AATTTTGATAACTGATATTTGTTGCTGTTACCTGCATTTTCTACAAAGTGTTATGATCAG
                      ____________________________________________________________
consensus             AATTTTGATAACTGATATTTGTTGCTGTTACCTGCATTTTCTACAAAGTGTTATGATCAG
 
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rJMSF034P14+          AGCATTGACATTTTAGATTGATTCCTATTATGCTTGGATATCTTAGGGGAGGATTTGAGC
                      ____________________________________________________________
consensus             AGCATTGACATTTTAGATTGATTCCTATTATGCTTGGATATCTTAGGGGAGGATTTGAGC
 
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rJMSF034P14+          TTTTCATTTCTTCCCATGAAATATGGCTTTTATTATTGATGATGTAGTTTAAGAGATTTT
                      ____________________________________________________________
consensus             TTTTCATTTCTTCCCATGAAATATGGCTTTTATTATTGATGATGTAGTTTAAGAGATTTT