Contig 014030:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF007K04-                             AGATTCCCACTGTGACAGAACTCAGTGATAACCCAGTGAGTC
JMSF034A12-                          GCCAGATTCCCACTGTGACAGAACTCAGTGATAACCCAGTGAGTC
                      ____________________________________________________________
consensus                            GCCAGATTCCCACTGTGACAGAACTCAGTGATAACCCAGTGAGTC
 
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JMSF007K04-           AACTCGTGTTGCAGCTAGTCAGCAACTCAGCATCCACTTTCCCTGTGAAGAAAATGAAGG
JMSF034A12-           AACTCGTGTTGCAGCTAGTCAGCAACTCAGCATCCACTTTCCCTGTGAAGAAAATGAAGG
                      ____________________________________________________________
consensus             AACTCGTGTTGCAGCTAGTCAGCAACTCAGCATCCACTTTCCCTGTGAAGAAAATGAAGG
 
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JMSF007K04-           CCGGAATTACTAAGCTCATAGTTCTCCACCCACCGGCGGTGCCGGCATCATCTCCTCGTG
JMSF034A12-           CCGGAATTACTAAGCTCATAGTTCTCCACCCACCGGCGGTGCCGGCATCATCTCCTCGTG
                      ____________________________________________________________
consensus             CCGGAATTACTAAGCTCATAGTTCTCCACCCACCGGCGGTGCCGGCATCATCTCCTCGTG
 
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JMSF007K04-           TTCTGCTTCTGGGCTTCATCTCATTCTTCGCTTTGGCTTCTGCCCTCACTTTCTTCTCCG
JMSF034A12-           TTCTGCTTCTGGGCTTCATCTCATTCTTCGCTTTGGCTTCTGCCCTCACTTTCTTCTCCG
                      ____________________________________________________________
consensus             TTCTGCTTCTGGGCTTCATCTCATTCTTCGCTTTGGCTTCTGCCCTCACTTTCTTCTCCG
 
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JMSF007K04-           CCAAAGACGCCGTTGAGGGAGGGGGAAAGCCTCCGGCGGGAATACCCCAGCCGGTGTTGG
JMSF034A12-           CCAAAGACGCCGTTGAGGGAGGGGGAAAGCCTCCGGCGGGAATACCCCAGCCGGTGTTGG
                      ____________________________________________________________
consensus             CCAAAGACGCCGTTGAGGGAGGGGGAAAGCCTCCGGCGGGAATACCCCAGCCGGTGTTGG
 
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JMSF007K04-           AAGCGCTTGTGCATTACGCCGCCGTGGCGAACACCACCTATCTGTCCTCCCGAATGTCCT
JMSF034A12-           AAGCGCTTGTGCATTACGCCGCCGTGGCGAACACCACCTATCTGTCCTCCCGAATGTCCT
                      ____________________________________________________________
consensus             AAGCGCTTGTGCATTACGCCGCCGTGGCGAACACCACCTATCTGTCCTCCCGAATGTCCT
 
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JMSF007K04-           CCGCGGAAGTGGGCGCCGTGGCGGCTGCCCTCCGCCGCTGCGGAAACGCCTG        
JMSF034A12-           CCGCGGAAGTGGGCGCCGTGGCGGCTGCCCTCCGCCGCTGCGGAAACGCCTGCAACTTCC
                      ____________________________________________________________
consensus             CCGCGGAAGTGGGCGCCGTGGCGGCTGCCCTCCGCCGCTGCGGAAACGCCTGCAACTTCC
 
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JMSF034A12-           TTGTTTTCGGGCTGAGCCACGAGACCCTCCTCTGGCATTCGCTGAACCACGGCGGGCGGA
rJMSF034A12+                                                              CGGGCGGA
                      ____________________________________________________________
consensus             TTGTTTTCGGGCTGAGCCACGAGACCCTCCTCTGGCATTCGCTGAACCACGGCGGGCGGA
 
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JMSF034A12-           CGGTGTTCGTGGACGAGAGCGCGTACATGGTGGCGAAAGCGGAGGAGAAGCACCGCGGGA
rJMSF034A12+          CGGTGTTCGTGGACGAGAGCGCGTACATGGTGGCGAAAGCGGAGGAGAAGCNCCGCGGGA
                      ____________________________________________________________
consensus             CGGTGTTCGTGGACGAGAGCGCGTACATGGTGGCGAAAGCGGAGGAGAAGCACCGCGGGA
 
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JMSF034A12-           TTGAAGCGTACGACATTCAGTTCACCACCAAAGCCGCCCAATTGTATCATCTCTTGGAGC
rJMSF034A12+          TTGAAGCGTACGACATTCAGTTCACCACCAAAGCCGCCCAATTGTATCATCTCTTGGAGC
                      ____________________________________________________________
consensus             TTGAAGCGTACGACATTCAGTTCACCACCAAAGCCGCCCAATTGTATCATCTCTTGGAGC
 
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JMSF034A12-           ACGCCAAGGAACGTGGCATGAAAGAGTGCCGGCCGGTGCAGAATCTGCTCTTCTCCGACT
rJMSF007K04+                                                                   ACT
rJMSF034A12+          ACGCCAAGGAACGTGGCATGAAAGAGTGCCGGCCGGTGCAGAATNTGCTNTTNTCCGACT
                      ____________________________________________________________
consensus             ACGCCAAGGAACGTGGCATGAAAGAGTGCCGGCCGGTGCAGAATCTGCTCTTCTCCGACT
 
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JMSF034A12-           GCAAGTTGGCCGTCAACGACCTCCCGAACCACATATAC                      
rJMSF007K04+          GCAAGTTGGCCGTCAACGNCCTCCCGAACCNCATATACGACGTCGCNTGGGACGTGATCT
rJMSF034A12+          GCAAGTTGGCCGTCAACGACCTCCCGAACCACATATACGACGTCGCTTGGGACGTGATCT
                      ____________________________________________________________
consensus             GCAAGTTGGCCGTCAACGACCTCCCGAACCACATATACGACGTCGCTTGGGACGTGATCT
 
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rJMSF007K04+          TGGTNGACGGGCCNCGGGGGTACGCGCCGTCGTCGCCGGGGAGAATGTNGGNGATATTCN
rJMSF034A12+          TGGTGGACGGGCCGCGGGGGTACGCGCCGTCGTCGCCGGGGAGAATGTNGGCGATATTCA
                      ____________________________________________________________
consensus             TGGTGGACGGGCCGCGGGGGTACGCGCCGTCGTCGCCGGGGAGAATGTNGGCGATATTCA
 
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rJMSF007K04+          CCGCCGGCGTNCTGGCCNGGAGCAAGGTGGGCGGCGAGGCGGAAACGCAGGTGTTTGTGC
rJMSF034A12+          CCGCCGGCGTGCTGGCCNGGAGCAAGGTGGGCGGCGAGGCGGAAACGCAGGTGTTTGTGC
                      ____________________________________________________________
consensus             CCGCCGGCGTGCTGGCCNGGAGCAAGGTGGGCGGCGAGGCGGAAACGCAGGTGTTTGTGC
 
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rJMSF007K04+          NCGAGATTGGGAGAGAGGTTGAAAGAGTGAGCNGTGAGAGATTTCTTTGCAATGCCAATT
rJMSF034A12+          NCGAGATTGGGAGAGAGGTTGAAAGAGTGAGCNGTGAGAGATTTCTNTGCAATGCCAATT
                      ____________________________________________________________
consensus             NCGAGATTGGGAGAGAGGTTGAAAGAGTGAGCNGTGAGAGATTTCTTTGCAATGCCAATT
 
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rJMSF007K04+          TGGTAGATTTGGTGGANGCTTTGGGGCNTTTTNCGGTGACCAAAATGGACGCTGCCAATT
rJMSF034A12+          TGGTAGATTTGGTGGATGCTTTGGGGCNTTTTGCGGTGACCNAAATGGACGCTGCCAATT
                      ____________________________________________________________
consensus             TGGTAGATTTGGTGGATGCTTTGGGGCNTTTTGCGGTGACCAAAATGGACGCTGCCAATT
 
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rJMSF007K04+          TCAGATTTTGCTCTCCNTTAATGGCAGATGAGTGAAGAACTGAAGTGANGTCATAATTTC
rJMSF034A12+          TCAGATTTTGCTCTCCNTTAATGGCNGATGAGTGAAGAACTGAAGTGATGTCATAATTTC
                      ____________________________________________________________
consensus             TCAGATTTTGCTCTCCNTTAATGGCAGATGAGTGAAGAACTGAAGTGATGTCATAATTTC
 
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rJMSF007K04+          CACTTTTTTTNAAAAATATATACTTTT                                 
rJMSF034A12+          CNCTTTTTTTAAAAAATATATATTTTTGTTAGAATATATAGCCAAATCGATCTGTAATGT
                      ____________________________________________________________
consensus             CACTTTTTTTAAAAAATATATATTTTTGTTAGAATATATAGCCAAATCGATCTGTAATGT
 
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rJMSF034A12+          GTTTATTGTCTTTAAAAAAAAAAGTGAGAACCAAATGTTATCTAAATATTCACAATTTAT
                      ____________________________________________________________
consensus             GTTTATTGTCTTTAAAAAAAAAAGTGAGAACCAAATGTTATCTAAATATTCACAATTTAT