clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF003J19 | Sequence | 322 | 005224 (4) | 693 | 014029 (6) | gb|KCW58270.1| | 2e-83 | hypothetical protein EUGRSUZ_H00962 [Eucalyptus grandis] | |||
JMSF034A02 | Sequence | 692 | 014029 (6) | gb|KDP36902.1| | 3e-114 | hypothetical protein JCGZ_08193 [Jatropha curcas] | 708 | 014029 (6) | gb|KCW58270.1| | 6e-85 | hypothetical protein EUGRSUZ_H00962 [Eucalyptus grandis] |
JMSF038H15 | Sequence | 659 | 005224 (4) | gb|EPS57357.1| | 2e-54 | hypothetical protein M569_17461, partial [Genlisea aurea] | 910 | 014029 (6) | ref|XP_007017848.1| | 1e-126 | Calcium-dependent lipid-binding (CaLB domain) family protein isoform 3 [Theobro |
JMSF040G04 | Sequence | 145 | 014029 (6) | ref|XP_007017848.1| | 2e-10 | Calcium-dependent lipid-binding (CaLB domain) family protein isoform 3 [Theobro | |||||
JMSF048B21 | Sequence | 716 | 005224 (4) | ref|XP_011083585.1| | 2e-114 | PREDICTED: synaptotagmin-2 [Sesamum indicum] | 694 | 014029 (6) | gb|KCW58270.1| | 1e-82 | hypothetical protein EUGRSUZ_H00962 [Eucalyptus grandis] |
This contig is upended
. : . : . : . : . : . :
JMSF034A02- AATGGATCCTTCCAAGGCAAGCAAGAGGCCGGTTGG
____________________________________________________________
consensus AATGGATCCTTCCAAGGCAAGCAAGAGGCCGGTTGG
. : . : . : . : . : . :
JMSF034A02- AATTCTTCATGTGAAGGTTGTGAAGGCAATGAATCTGAAGAAGAAAGATCTTTTGGGGTC
____________________________________________________________
consensus AATTCTTCATGTGAAGGTTGTGAAGGCAATGAATCTGAAGAAGAAAGATCTTTTGGGGTC
. : . : . : . : . : . :
JMSF034A02- TTCAGATCCCTGTGTCAAACTCAAGCTTACTGAGGATAAACTTCCTAGAAAGAAAACGAG
rJMSF038H15+ GAAAGGAAACGAG
____________________________________________________________
consensus TTCAGATCCCTGTGTCAAACTCAAGCTTACTGAGGATAAACTTCCTAGAAAGGAAACGAG
. : . : . : . : . : . :
JMSF034A02- TGTAAAGCAAAGAAACTTGAATCCCGAATGGAATGAGGAATTCAATTTTGTCGTTAAGGA
rJMSF038H15+ TGTAAAGCAAAGAAACTTGAATCCCGAATGGAATGAGGAATTCAATTTTGTCGTTAAGGA
____________________________________________________________
consensus TGTAAAGCAAAGAAACTTGAATCCCGAATGGAATGAGGAATTCAATTTTGTCGTTAAGGA
. : . : . : . : . : . :
JMSF034A02- TCCGCAATCCCAAGCTTTAGACATTTCTGTCTATGACTGGGAA-CAGATTGGTACGAATG
rJMSF040G04+ ATTTCTGTCTATGACTGGGAACCAGATTGGTACGAATG
rJMSF038H15+ TCCGCAATCCCAAGCTTTAGACATTTCTGTCTATGACTGGGAA-CAGATTGGTACGAATG
____________________________________________________________
consensus TCCGCAATCCCAAGCTTTAGACATTTCTGTCTATGACTGGGAA-CAGATTGGTACGAATG
. : . : . : . : . : . :
JMSF034A02- AAATGATGGGCATAAATATTGTTCCTTTGAAAGATCTTACTCCCGAAGAACCTAAAGTCC
rJMSF040G04+ AAATGATGGGCATAAATATTGTTCCTTTGAAAGATCTTACTCCCGAAGAACCTAAAGTCC
rJMSF038H15+ AAATGATGGGCATAAATATTGTTCCTTTGAAAGATCTTACTCCCGAAGAACCTAAAGTCC
____________________________________________________________
consensus AAATGATGGGCATAAATATTGTTCCTTTGAAAGATCTTACTCCCGAAGAACCTAAAGTCC
. : . : . : . : . : . :
JMSF034A02- TGACGCTGAATCTTCTGAAAACCCTGGATCCAAATGATCCTATAAACGAGAAGTCGCGAG
rJMSF040G04+ TGACGCTGAATCTTCTGAAAACCCTGGATCCAAATGAT
rJMSF038H15+ TGACGCTGAATCTTCTGAAAACCCTGGATCCAAATGATCCTATAAACGAGAAGTCGCGAG
rJMSF003J19+ GGATCCAAATGATCCTATAAACGAGAAGTCGCGAG
rJMSF048B21+ ATCCAAATGATCCTATAAACGAGAAGTCGCGAG
rJMSF034A02+ TTCTGAAAACCCTGGATCCAAATGATCCTATAAACGAGAAGTCGCGAG
____________________________________________________________
consensus TGACGCTGAATCTTCTGAAAACCCTGGATCCAAATGATCCTATAAACGAGAAGTCGCGAG
. : . : . : . : . : . :
JMSF034A02- GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
rJMSF038H15+ GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
rJMSF003J19+ GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
rJMSF048B21+ GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
rJMSF034A02+ GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
____________________________________________________________
consensus GACAGATAGTTCTTGAAGTAATGTACAAGCCTTTTACAGACGAGGAAATGCCAAATGATG
. : . : . : . : . : . :
JMSF034A02- TTGATGAGTCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
rJMSF038H15+ TTGATGAGTCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
rJMSF003J19+ TTGATGAGTCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
rJMSF048B21+ TTGATGAATCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
rJMSF034A02+ TTGATGAGTCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
____________________________________________________________
consensus TTGATGAGTCGGGAGGTGAAGTAGAGAAGGCTCCCGAAGGAACACCTGCCGGTGGTGGAT
. : . : . : . : . : . :
JMSF034A02- TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
rJMSF038H15+ TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
rJMSF003J19+ TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
rJMSF048B21+ TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
rJMSF034A02+ TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
____________________________________________________________
consensus TGCTAGTAGTCATCGTCCACGAAGCTCAGGACCTCGAAGGGAAGCACCACACAAATCCAT
. : . : . : . : . : . :
JMSF034A02- TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
rJMSF038H15+ TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
rJMSF003J19+ TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
rJMSF048B21+ TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
rJMSF034A02+ TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
____________________________________________________________
consensus TCGTTCGTTTGCTCTTCAAAGGAGAGGAGAAAAAAACTAAGACTGTCAAGAAAAACCGAG
. : . : . : . : . : . :
JMSF034A02- ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAA
rJMSF038H15+ ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAAGGC
rJMSF003J19+ ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAAGGC
rJMSF048B21+ ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAAGGC
rJMSF034A02+ ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAAGGC
____________________________________________________________
consensus ATCCTAGATGGGGAGAGGACTTTCAGTTCATGTTGGAGGAGCCACCTACTAATGAAAGGC
. : . : . : . : . : . :
rJMSF038H15+ TTCATGTCGAAGTTTTTAGCAACTCATCCAGAATAGGTCTGCTGCATCCTAAGGAGTCTC
rJMSF003J19+ TTCATGTCGAAGTTTTTAGCAACTCATCCAGAATAGGTCTGCTGCATCCTAAGGAGTCTC
rJMSF048B21+ TTCATGTCGAAGTTTTTAGCAACTCATCCAGAATAGGTCTGCTGCATCCTAAGGAGTCTC
rJMSF034A02+ TTCATGTCGAAGTTTTTAGCAACTCATCCAGAATAGGTCTGCTGCATCCTAAGGAGTCTC
____________________________________________________________
consensus TTCATGTCGAAGTTTTTAGCAACTCATCCAGAATAGGTCTGCTGCATCCTAAGGAGTCTC
. : . : . : . : . : . :
rJMSF038H15+ TGGGATATGTGGATATAGCCCTGGCTGATGTAGTGAGCAATAAGAGAATCAATGAGCGAT
rJMSF003J19+ TGGGATATGTGGATATAGCCCTGGCTGATGTAGTGAGCAATAAGAGAATCAATGAGCGAT
rJMSF048B21+ TGGGATATGTGGATATAGCCCTGGCTGATGTAGTGAGCAATAAGAGAATCAATGAGCGAT
rJMSF034A02+ TGGGATATGTGGATATAGCCCTGGCTGATGTAGTGAGCAATAAGAGAATCAATGAGCGAT
____________________________________________________________
consensus TGGGATATGTGGATATAGCCCTGGCTGATGTAGTGAGCAATAAGAGAATCAATGAGCGAT
. : . : . : . : . : . :
rJMSF038H15+ ACCACCTTATTGACTCCAAGAATGGTCGAATCCAGATTGAGCTACAATGGAGAACTGCAT
rJMSF003J19+ ACCACCTTATTGACTCCAAGAATGGTCGAATCCAGATTGAGCTACAATGGAGAACTGCAT
rJMSF048B21+ ACCACCTTATTGACTCCAAGAATGGTCGAATCCAGATTGAGCTACAATGGAGAACTGCAT
rJMSF034A02+ ACCACCTTATTGACTCCAAGAATGGTCGAATCCAGATTGAGCTACAATGGAGAACTGCAT
____________________________________________________________
consensus ACCACCTTATTGACTCCAAGAATGGTCGAATCCAGATTGAGCTACAATGGAGAACTGCAT
. : . : . : . : . : . :
rJMSF038H15+ CAACTTGATCACAATTCTCCAGTACTATGTTGTACAACGCTGTAAAAATTCCTTAAAATT
rJMSF003J19+ CAACTTGATCACAATTCTCCAGTACTATGTTGTACAACGCTGTAAAAATTCCTTAAAATT
rJMSF048B21+ CAACTTGATCACAATTCTCCAGTACTATGTTGTACAACGCTGTAAAAATTCCTTAAAATT
rJMSF034A02+ CAACTTGATCACAATTCTCCAGTACTATGTTGTACAACGCTGTAAAAATTCCTTAAAATT
____________________________________________________________
consensus CAACTTGATCACAATTCTCCAGTACTATGTTGTACAACGCTGTAAAAATTCCTTAAAATT
. : . : . : . : . : . :
rJMSF038H15+ TCATACCAACGTGTGTGTGCCAATGTTTCTTATTCTTTACTTTAATGTTTCTACTTTATG
rJMSF003J19+ TCATACCAACGTGTGTGTGCCAATGTTTCTTATTCTTTACTTTAATGTTTCTACTTTATG
rJMSF048B21+ TCATACCAACGTGTGTGTGCCAATGTTTCTTATTCTTTACTTTAATGTTTCTACTTTATG
rJMSF034A02+ TCATACCAACGTGTGTGTGCCAATGTTTCTTATTCTTTACTTTAATGTTTCTACTTTATG
____________________________________________________________
consensus TCATACCAACGTGTGTGTGCCAATGTTTCTTATTCTTTACTTTAATGTTTCTACTTTATG
. : . : . : . : . : . :
rJMSF038H15+ AACTCATTCTTGTTGAGACATATAGCTGCTTGTTGTCTGTATAGGAAAA
rJMSF003J19+ AACTCATTCTTGTTGAGACATATAGCTGCTTGTTGTCTGTATAGGAAAAC
rJMSF048B21+ AACTCATTCTTGTTGAGACATATAGCTGCTTGTTGTCTGTATAGGAAAA
rJMSF034A02+ AACTCATTCTTGTTGAGACATATAGCTGCTTGTTGTCTGTATAGGAAAACCTGTGTATTG
____________________________________________________________
consensus AACTCATTCTTGTTGAGACATATAGCTGCTTGTTGTCTGTATAGGAAAACCTGTGTATTG