Contig 014024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D21Sequence466014024 (16)ref|XP_010265550.1|2e-39PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Nelumbo nucifer693014024 (16)ref|XP_006427956.1|9e-97hypothetical protein CICLE_v10026373mg [Citrus clementina] ref|XP_006464501.1| P
JMFF022D02Sequence514014024 (16)ref|XP_009336369.1|1e-46PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Pyrus x bretsch741014024 (16)ref|XP_006359022.1|2e-75PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like [Solanum tu
JMFF031I16Sequence607014024 (16)ref|XP_006359022.1|9e-73PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like [Solanum tu704014024 (16)ref|XP_006359022.1|3e-72PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like [Solanum tu
JMFF032J03Sequence561014024 (16)ref|XP_009336369.1|2e-55PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Pyrus x bretsch747014024 (16)ref|XP_006427956.1|9e-81hypothetical protein CICLE_v10026373mg [Citrus clementina] ref|XP_006464501.1| P
JMSF021P23Sequence639014024 (16)ref|XP_008354618.1|2e-68PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Malus domestica750014024 (16)ref|XP_006427956.1|3e-82hypothetical protein CICLE_v10026373mg [Citrus clementina] ref|XP_006464501.1| P
JMSF025K02Sequence676014024 (16)ref|XP_009591524.1|3e-57PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Nicotiana tomen765014024 (16)ref|XP_006359022.1|2e-77PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like [Solanum tu
JMSF032N05Sequence677014024 (16)ref|XP_009591524.1|1e-78PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Nicotiana tomen693014024 (16)ref|XP_009786800.1|9e-65PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Nicotiana sylve
JMSF047N16Sequence669014024 (16)ref|XP_009591524.1|9e-78PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Nicotiana tomen746014024 (16)ref|XP_006427956.1|2e-76hypothetical protein CICLE_v10026373mg [Citrus clementina] ref|XP_006464501.1| P

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021P23- GAGAAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
JMFF022D02- AAAGTAAAGTGTTTCAGCTCCGACG
JMFF005D21- AAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
JMFF032J03- AAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
JMSF047N16- GAGAAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
JMSF032N05- GAGAAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
JMSF025K02- GAGAAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
                      ____________________________________________________________
consensus GAGAAAGGGCAAAGGAAAGTGTTTCAGCTCCGACG
 
. : . : . : . : . : . :
JMSF021P23- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMFF022D02- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMFF005D21- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMFF032J03- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMSF047N16- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMSF032N05- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
JMSF025K02- CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
                      ____________________________________________________________
consensus CAGAGAGTGATAGACGACGATCCTAAGCAGCTTTCGTTCTTTCGCAATGGCTTTCGCTTC
 
. : . : . : . : . : . :
JMSF021P23- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMFF022D02- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMFF005D21- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMFF032J03- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMSF047N16- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMSF032N05- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
JMSF025K02- TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
                      ____________________________________________________________
consensus TCGATTCCTTTCCAGATCTAGCCGTCAGTTATGTAGTAGCCAGATCATCACGCGGCCAGA
 
. : . : . : . : . : . :
JMSF021P23- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAA-GG
JMFF022D02- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
JMFF005D21- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
JMFF032J03- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
JMSF047N16- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
JMSF032N05- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
JMSF025K02- TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
                      ____________________________________________________________
consensus TAGTGCCATTCCAATTCGTTCCTTTGCCAAAGGAGCTGGTGCTCCAGCAGCACTTAAGGG
 
. : . : . : . : . : . :
JMSF021P23- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMFF022D02- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMFF005D21- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMFF032J03- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMSF047N16- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMSF032N05- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
JMSF025K02- CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
rJMFF005D21+ CAAGAAGAAATTTGAGACTGCAATTGG
                      ____________________________________________________________
consensus CGACGAAATGTTGAAGAATGTCTTTCTTGAGGTCAAGAAGAAATTTGAGACTGCAATTGG
 
. : . : . : . : . : . :
JMSF021P23- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMFF022D02- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMFF005D21- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMFF032J03- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMSF047N16- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMSF032N05- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
JMSF025K02- GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCA--A
rJMFF005D21+ GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
rJMSF021P23+ AGACACTGCTGCTGTGACTCAATA
rJMSF025K02+ CACCATAGATCCTGAAGACACTGCTGCTGTGACTCA--A
rJMFF032J03+ GCTGTGACTCAATA
                      ____________________________________________________________
consensus GGTCCTCCGAAAGGAGAAGATCACCATAGATCCTGAAGACACTGCTGCTGTGACTCAATA
 
. : . : . : . : . : . :
JMSF021P23- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMFF022D02- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMFF005D21- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMFF032J03- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMSF047N16- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMSF032N05- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMSF025K02- TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMFF005D21+ TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMSF021P23+ TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
JMFF031I16- GGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMSF025K02+ TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMFF031I16+ GGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMFF032J03+ TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
rJMFF022D02+ AAGTCATGAAGACTGTAAGGGAAAAGGCAAATNTCCAATCAGAGTCTGAAAAGAT
rJMSF047N16+ AAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
                      ____________________________________________________________
consensus TGCCAAAGTCATGAAGACTGTAAGGGAAAAGGCAAATCTCCAATCAGAGTCTGAAAAGAT
 
. : . : . : . : . : . :
JMSF021P23- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMFF022D02- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMFF005D21- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMFF032J03- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMSF047N16- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMSF032N05- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMSF025K02- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMFF005D21+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMSF021P23+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
JMFF031I16- CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMSF025K02+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMFF031I16+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMFF032J03+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMFF022D02+ CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMSF047N16+ CAANGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
rJMSF032N05+ TGAGATTCCAGATGCTCGGACTTATCTGTTGAC
                      ____________________________________________________________
consensus CAAAGAAGCTATTGATACACAAACAAATGAGATTCCAGATGCTCGGACTTATCTGTTGAC
 
. : . : . : . : . : . :
JMSF021P23- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
JMFF022D02- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCGTGGCATTGAGGAAAAGAT
JMFF005D21- ACTGAAAGAGATAA
JMFF032J03- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
JMSF047N16- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
JMSF032N05- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
JMSF025K02- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMFF005D21+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMSF021P23+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
JMFF031I16- ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMSF025K02+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMFF031I16+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMFF032J03+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMFF022D02+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCGTGGCATTGAGGAAAAGAT
rJMSF047N16+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
rJMSF032N05+ ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
                      ____________________________________________________________
consensus ACTGAAAGAGATAAGGATTAAGAGTGGCCTTCCTGATGAGCATGGCATTGAGGAAAAGAT
 
. : . : . : . : . : . :
JMSF021P23- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
JMFF022D02- GATGAATGC
JMFF032J03- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTG
JMSF047N16- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
JMSF032N05- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
JMSF025K02- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMFF005D21+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMSF021P23+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
JMFF031I16- GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMSF025K02+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMFF031I16+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMFF032J03+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMFF022D02+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMSF047N16+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
rJMSF032N05+ GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
                      ____________________________________________________________
consensus GATGAATGCTTTGGATAAGGTAGAGAAAGAACTCAAGAAGCCACTACTGAGGAATGACAA
 
. : . : . : . : . : . :
JMSF021P23- AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
JMSF047N16- AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
JMSF032N05- AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
JMSF025K02- AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMFF005D21+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMSF021P23+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
JMFF031I16- AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMSF025K02+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMFF031I16+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMFF032J03+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMFF022D02+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMSF047N16+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
rJMSF032N05+ AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
                      ____________________________________________________________
consensus AAAGGGAATCGCACTCCTCACAGCAGAGTTCGATAAGATCAACCAGAAAATTGGCATCAG
 
. : . : . : . : . : . :
JMSF021P23- CCGAG
JMSF047N16- CCGAGAAAACCTGCCCAAGTATGAAGAACAATTG
JMSF032N05- CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAA
JMSF025K02- CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAG
rJMFF005D21+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMSF021P23+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
JMFF031I16- CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMSF025K02+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMFF031I16+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMFF032J03+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMFF022D02+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMSF047N16+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
rJMSF032N05+ CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
                      ____________________________________________________________
consensus CCGAGAAAACCTGCCCAAGTATGAAGAACAATTGGAAATGAAGGTTGCTAAAGCTCAATT
 
. : . : . : . : . : . :
rJMFF005D21+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMSF021P23+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
JMFF031I16- AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMSF025K02+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMFF031I16+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMFF032J03+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMFF022D02+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMSF047N16+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
rJMSF032N05+ AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
                      ____________________________________________________________
consensus AGAAGAATTGAAAAAGGATGCCCTTGAGGCAATGGAAACTCAGAAGAAGAGGGAGGAGTT
 
. : . : . : . : . : . :
rJMFF005D21+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMSF021P23+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
JMFF031I16- CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMSF025K02+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMFF031I16+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMFF032J03+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMFF022D02+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMSF047N16+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
rJMSF032N05+ CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
                      ____________________________________________________________
consensus CAATGATGAGGAAATGCCTGAAGTGAAGTCTTTGGACATTAGAAACTTTCTCTAAGAACA
 
. : . : . : . : . : . :
rJMFF005D21+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMSF021P23+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
JMFF031I16- TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMSF025K02+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMFF031I16+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMFF032J03+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMFF022D02+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMSF047N16+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
rJMSF032N05+ TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
                      ____________________________________________________________
consensus TTTGGTGGAAGACTTTTTCTTTGTGCTTTTCTTTCACCTTGGCATAATGAGTTCACAAGT
 
. : . : . : . : . : . :
rJMFF005D21+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMSF021P23+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
JMFF031I16- GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMSF025K02+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMFF031I16+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMFF032J03+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMFF022D02+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGTGCTGGATTTT
rJMSF047N16+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
rJMSF032N05+ GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
                      ____________________________________________________________
consensus GACCTCTGCTACATTTGAAACAATACCATCCTGCTGATATGTTTTCAGGCGCTGGATTTT
 
. : . : . : . : . : . :
rJMFF005D21+ TTTTTA
rJMSF021P23+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
JMFF031I16- TTTTTATTTTTTTAAAATAAAAGTAATGAC
rJMSF025K02+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
rJMFF031I16+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
rJMFF032J03+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
rJMFF022D02+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
rJMSF047N16+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
rJMSF032N05+ TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
                      ____________________________________________________________
consensus TTTTTATTTTTTTAAAATAAAAGTAATGACCAGGGAATTAAATGCTATATGTGTTTTAGT
 
. : . : . : . : . : . :
rJMSF021P23+ CCAGAGAAGAGAATATGCNTNTATGCTGCCTGCATNTGGT
rJMSF025K02+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGT
rJMFF031I16+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
rJMFF032J03+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
rJMFF022D02+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
rJMSF047N16+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
rJMSF032N05+ CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
                      ____________________________________________________________
consensus CCAGAGAAGAGAATATGCTTATATGCTGCCTGCATTTGGTCAGTGGTTTTGTAATTGAAA
 
. : . : . : . : . : . :
rJMFF031I16+ TGCAA
rJMFF032J03+ TGCAATTTAACCT
rJMFF022D02+ TGCAATTTAACCTTTTGATGCTACGA
rJMSF047N16+ TGCAATTTAACCTTTTGATGCTACGA
rJMSF032N05+ TGCAATTTAACCTTTTGATGCTACGAAATTTCAATCNATTCTGNTGTGTCAGNTAGGGNA
                      ____________________________________________________________
consensus TGCAATTTAACCTTTTGATGCTACGAAATTTCAATCNATTCTGNTGTGTCAGNTAGGGNA