Contig 014023:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002O21+                                             CTGATATTGTAGCTCTTTCGGCTAG
rJMSF032K20+                                                   TTGTAGCTCTTTCGGCTAG
                      ____________________________________________________________
consensus                                                CTGATATTGTAGCTCTTTCGGCTAG
 
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rJMSF002O21+          AGACGGTGCTGTTATGTTAAAAGGGCCACGGGCCGAAATGAAGACCGGGAGAAGGGATAG
rJMSF032K20+          AGACGGTGCTGTTATGTTAAAAGGGCCACGGGCCGAAATGAAGACCGGGAGAAGGGATAG
                      ____________________________________________________________
consensus             AGACGGTGCTGTTATGTTAAAAGGGCCACGGGCCGAAATGAAGACCGGGAGAAGGGATAG
 
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rJMSF002O21+          CAAGGAAACCTATTTAGCAGAAGTTGAGAACTTCATCCCCAACCACAACGACTCCATGGA
rJMSF032K20+          CAAGGAAACCTATTTAGCAGAAGTTGAGAACTTCATCCCCAACCACAACGACTCCATGGA
                      ____________________________________________________________
consensus             CAAGGAAACCTATTTAGCAGAAGTTGAGAACTTCATCCCCAACCACAACGACTCCATGGA
 
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rJMSF002O21+          ACTAGTTCTGTCACGATTCCAGTCCATTGGAGTCGATACAGAAGGAACCGTCGCCCTCCT
rJMSF032K20+          ACTAGTTCTGTCACGATTCCAGTCCATTGGAGTCGATACAGAAGGAACCGTCGCCCTCCT
                      ____________________________________________________________
consensus             ACTAGTTCTGTCACGATTCCAGTCCATTGGAGTCGATACAGAAGGAACCGTCGCCCTCCT
 
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rJMSF002O21+          AGGTGCCCACTCAGTGGGCCGGGTTCACTGCATCAACATCGTCCACAGGCTCTACCCCAC
rJMSF032K20+          AGGTGCCCACTCAGTGGGCCGGGTTCACTGCATCAACATCGTCCACAGGCTCTACCCCAC
                      ____________________________________________________________
consensus             AGGTGCCCACTCAGTGGGCCGGGTTCACTGCATCAACATCGTCCACAGGCTCTACCCCAC
 
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rJMSF002O21+          CGTGGACCCGACGCTGGACCCCACCTACGCCGACTACCTGAAGCTCCGGTGCCCGTCGGC
rJMSF032K20+          CGTGGACCCGACGCTGGACCCCACCTACGCCGACTACCTGAAGCTCCGGTGCCCGTCGGC
                      ____________________________________________________________
consensus             CGTGGACCCGACGCTGGACCCCACCTACGCCGACTACCTGAAGCTCCGGTGCCCGTCGGC
 
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rJMSF002O21+          GGAGCCTGACCCGAGGGCGGTGGAACCGACATACTCCAGAAACGACCGGCGGACACCCAT
rJMSF032K20+          GGAGCCTGACCCGAGGGCGGTGGAACCGACATACTCCAGAAACGACCGGCGGACACCCAT
                      ____________________________________________________________
consensus             GGAGCCTGACCCGAGGGCGGTGGAACCGACATACTCCAGAAACGACCGGCGGACACCCAT
 
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rJMSF002O21+          GATTCTTGACAACATGTACTACAAGAACATTCTGGAGCACAAGGGGCTGTTGGTAGTTGA
rJMSF032K20+          GATTCTTGACAACATGTACTACAAGAACATTCTGGAGCACAAGGGGCTGTTGGTAGTTGA
                      ____________________________________________________________
consensus             GATTCTTGACAACATGTACTACAAGAACATTCTGGAGCACAAGGGGCTGTTGGTAGTTGA
 
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rJMSF002O21+          TGAACTGCTGGCCACTCATCCTGCCACCGCTCCTTTTGTGGAGAAGATGGCGGCGGATAA
rJMSF032K20+          TGAACTGCTGGCCACTCATCCTGCCACCGCTCCTTTTGTGGAGAAGATGGCGGCGGATAA
                      ____________________________________________________________
consensus             TGAACTGCTGGCCACTCATCCTGCCACCGCTCCTTTTGTGGAGAAGATGGCGGCGGATAA
 
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rJMSF002O21+          CCAGTATTTTCACGACCAGTTTGCTCGGGCTCTGGTGATTATGTCGGAGAATAATCCGCT
rJMSF032K20+          CCAGTATTTTCACGACCAGTTTGCTCGGGCTCTGGTGATTATGTCGGAGAATAATCCGCT
                      ____________________________________________________________
consensus             CCAGTATTTTCACGACCAGTTTGCTCGGGCTCTGGTGATTATGTCGGAGAATAATCCGCT
 
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rJMSF002O21+          CACCGGCGACCAAGGGGAGATCAGGAAGAATTGTCGCTACGTCAATACTAAATAAAAATA
rJMSF032K20+          CACCGGCGACCAAGGGGAGATCAGGAAGAATTGTCGCTACGTCAATACTAAATAAAAATA
                      ____________________________________________________________
consensus             CACCGGCGACCAAGGGGAGATCAGGAAGAATTGTCGCTACGTCAATACTAAATAAAAATA
 
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rJMSF002O21+          ATGTATGTTCCTAGGTAGCGGTTGAGAGTTGAGAGTTATTCACTGTTAAATATAGGTGAA
rJMSF032K20+          ATGTATGTTCCTAGGTAGCGGTTGAGAGTTGAGAGTTATTCACTGTTAAATATAGGTGAA
                      ____________________________________________________________
consensus             ATGTATGTTCCTAGGTAGCGGTTGAGAGTTGAGAGTTATTCACTGTTAAATATAGGTGAA
 
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rJMSF002O21+          TTGATTAATCTCTCTCAGCTCTTATCAA-CTGTAAACTACTGCCAAGTGGCAA       
rJMSF032K20+          TTGATTAATCTCTCTCAGCTCTTATCAACCTGTAAACTACTGCCAAGTGGCAAGTGTAAG
                      ____________________________________________________________
consensus             TTGATTAATCTCTCTCAGCTCTTATCAACCTGTAAACTACTGCCAAGTGGCAAGTGTAAG