Contig 014020:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031N06+                     GTAAGATACATTGTTTCTTCCCTCAAAATGTGGTTTCAGACATTAAGAC
                      ____________________________________________________________
consensus                        GTAAGATACATTGTTTCTTCCCTCAAAATGTGGTTTCAGACATTAAGAC
 
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rJMSF031N06+          ACCACTGTTCCTAATAAATTCAGCCTATGATCATTGGCAGGTTAGAAATGCCTTGATTCC
                      ____________________________________________________________
consensus             ACCACTGTTCCTAATAAATTCAGCCTATGATCATTGGCAGGTTAGAAATGCCTTGATTCC
 
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rJMSF031N06+          TGCCGTCGCCGATCCCTCCGGGGAGTGGAACAAGTGCAAGGCCGACATAGTTAATTGTCT
                      ____________________________________________________________
consensus             TGCCGTCGCCGATCCCTCCGGGGAGTGGAACAAGTGCAAGGCCGACATAGTTAATTGTCT
 
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rJMSF031N06+          GCCTAACCAACTCAAAACTCTCCAAGAGTATAGGTTGGAGTTTTTAAAAGCATTCAACGG
                      ____________________________________________________________
consensus             GCCTAACCAACTCAAAACTCTCCAAGAGTATAGGTTGGAGTTTTTAAAAGCATTCAACGG
 
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rJMSF031N06+          ATTAGAACCTTCCAAGGAAAGAGGGTACTTTATCGACTCTTGCTATCTACACTGTCAGAC
                      ____________________________________________________________
consensus             ATTAGAACCTTCCAAGGAAAGAGGGTACTTTATCGACTCTTGCTATCTACACTGTCAGAC
 
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rJMSF031M06+                                                       TAACAAGACGGTGGN
rJMSF031N06+          TGAACTGCAGATGTTTTGGCACATGCATAATTCTACGAGGTTGTCTAACAAGACGGTGGC
                      ____________________________________________________________
consensus             TGAACTGCAGATGTTTTGGCACATGCATAATTCTACGAGGTTGTCTAACAAGACGGTGGC
 
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rJMSF031M06+          GCAAGCGGCGGCGGATNGGTTNNTCNNCAGAGNTTTGTTTCGGANGATAGATTNCCCTTA
rJMSF031N06+          GCAAGCGGCGGCGGATTGGTTTTTCAACAGAGATTTGTTTCGGAAGATAGATTGCCCTTA
                      ____________________________________________________________
consensus             GCAAGCGGCGGCGGATTGGTTTTTCAACAGAGATTTGTTTCGGAAGATAGATTGCCCTTA
 
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rJMSF031M06+          TCCNTNCAACAAAAGTTGCGCCAAATCGGCC                             
rJMSF031N06+          TCCCTGCAACAAAAGTTGCACCAAAACGGCCACTTTATTATTGGACGACCGTGATCTATG
                      ____________________________________________________________
consensus             TCCCTGCAACAAAAGTTGCGCCAAATCGGCCACTTTATTATTGGACGACCGTGATCTATG
 
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rJMSF031N06+          ATCCAATATAATCATATTTTCTTCATAATTTTATACAAACATATAGAAGGAAAAGTAGTG
                      ____________________________________________________________
consensus             ATCCAATATAATCATATTTTCTTCATAATTTTATACAAACATATAGAAGGAAAAGTAGTG
 
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rJMSF031N06+          CTACAAATAAATGGGGGAATAATATTTTCTAAATTGAAAAGGAAATAGGAAAATGGGTAT
                      ____________________________________________________________
consensus             CTACAAATAAATGGGGGAATAATATTTTCTAAATTGAAAAGGAAATAGGAAAATGGGTAT
 
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rJMSF031N06+          AGGGAAACTAGATAGACAACCAGTGGAATAGATTATACCAGGTTTTTGAGTATATAGCTT
                      ____________________________________________________________
consensus             AGGGAAACTAGATAGACAACCAGTGGAATAGATTATACCAGGTTTTTGAGTATATAGCTT