| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006O20 | Sequence | 507 | 000827 (3) | ref|XP_011079628.1| | 5e-79 | PREDICTED: endoglucanase 17 [Sesamum indicum] | 716 | 014019 (3) | emb|CBI36884.3| | 1e-135 | unnamed protein product [Vitis vinifera] |
| JMSF001D22 | Sequence | 337 | 000827 (3) | ref|XP_011079628.1| | 7e-35 | PREDICTED: endoglucanase 17 [Sesamum indicum] | 747 | 014019 (3) | ref|NP_001234882.1| | 4e-147 | endo-1,4-beta-glucanase precursor [Solanum lycopersicum] gb|AAA80495.1| endo-1,4 |
| JMSF031L07 | Sequence | 701 | 000827 (3) | ref|XP_011079628.1| | 1e-102 | PREDICTED: endoglucanase 17 [Sesamum indicum] | 734 | 014019 (3) | emb|CBI36884.3| | 2e-114 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF001D22+ ATTCAGCGAAATGGGCAGACCCTCGGCGCGGC
____________________________________________________________
consensus ATTCAGCGAAATGGGCAGACCCTCGGCGCGGC
. : . : . : . : . : . :
rJMSF001D22+ GGAGACGGATAACACGTTTGGTTGGGACAACAAACATGTCGGGGCGAGAATCCTGCTGTC
rJMFF006O20+ TGGGACAACAAACATGTNGGGGCGAGAATCCTGCTGTC
____________________________________________________________
consensus GGAGACGGATAACACGTTTGGTTGGGACAACAAACATGTCGGGGCGAGAATCCTGCTGTC
. : . : . : . : . : . :
rJMSF001D22+ CAAGGCGTTCCTCGTACAGAGGATTCAGACTCTCCATGACTACAAAAGCCACGCCGATAA
rJMFF006O20+ CAAGGCGTTCCTCGTACAGAGGATTCAGACTCTCCATGANTACAAAAGCCACGCCGATAA
rJMSF031L07+ AGCCACGCCGATAA
____________________________________________________________
consensus CAAGGCGTTCCTCGTACAGAGGATTCAGACTCTCCATGACTACAAAAGCCACGCCGATAA
. : . : . : . : . : . :
rJMSF001D22+ CTACATTTGTTCCCTGGTTCCCGGGACGCCATTGACTCAGGCTAAGTATACACCGGCGGG
rJMFF006O20+ CTACATTTGTTCCCTGGTTCCCGGGACGCCATTGACTCAGGCTAAGTATACACCGGCGGG
rJMSF031L07+ CTACATTTGTTCCCTGGTTCCCGGGACGCCATTGACTCAGGNTAAGTATACACCGGCGGG
____________________________________________________________
consensus CTACATTTGTTCCCTGGTTCCCGGGACGCCATTGACTCAGGCTAAGTATACACCGGCGGG
. : . : . : . : . : . :
rJMSF001D22+ GCTTCTCTTTAAAATGAGCGACAGTAATATGCAGTATGTGACCTCCACCGCCTTTCTGCT
rJMFF006O20+ GCTTCTCTTTAAAATGAGCGACAGTAATATGCAGTATGTGACCTCCACCGCCTTTCTGCT
rJMSF031L07+ GCTTCTCTTTAAAATGAGCGACAGTAATATGCAGTATGTGACCTCCACCGCCTTTCTGCT
____________________________________________________________
consensus GCTTCTCTTTAAAATGAGCGACAGTAATATGCAGTATGTGACCTCCACCGCCTTTCTGCT
. : . : . : . : . : . :
rJMSF001D22+ GGTAACCTATGCCAAGTACTTAACCTCCGCCCACTCCTCCGTCAACTGCGGCGGCGTCAT
rJMFF006O20+ GGTAACCTATGCCAAGTACTTAACCTCCGCCCACTCCTCCGTCAACTGCGGCGGCGTCAT
rJMSF031L07+ GGTAACCTATGCCAAGTACTTAACCTCCGCCCACTCCTCCGTCAACTGCGGCGGCGTCAT
____________________________________________________________
consensus GGTAACCTATGCCAAGTACTTAACCTCCGCCCACTCCTCCGTCAACTGCGGCGGCGTCAT
. : . : . : . : . : . :
rJMSF001D22+ TGTTACCCCGAAGAGACTGCGAAATGTCGCCAAGAAACAGGTGGATTATCTGCTGGGAGA
rJMFF006O20+ TGTTACCCCGAAGAGACTGCGAAATGTCGCCAAGAAACAGGTGGATTATCTGCTGGGAGA
rJMSF031L07+ TGTTACCCCGAAGAGACTGCGAAATGTCGCCAAGAAACAGGTGGATTATCTGCTGGGAGA
____________________________________________________________
consensus TGTTACCCCGAAGAGACTGCGAAATGTCGCCAAGAAACAGGTGGATTATCTGCTGGGAGA
. : . : . : . : . : . :
rJMSF001D22+ CAACCCTTTAAGAATGTCGTACATGGTCGGTTACGGTCCGAGGTTTCCTCAGAGAATCCA
rJMFF006O20+ CAACCCTTTAAGAATGTCGTACATGGTCGGTTACGGTCCGAGGTTTCCTCAGAGAATCCA
rJMSF031L07+ CAACCCTTTAAGAATGTCGTACATGGTCGGTTACGGTCCGAGGTTTCCTCAGAGAATCCA
____________________________________________________________
consensus CAACCCTTTAAGAATGTCGTACATGGTCGGTTACGGTCCGAGGTTTCCTCAGAGAATCCA
. : . : . : . : . : . :
rJMSF001D22+ CCACCGAGGCTCCTCCTTGCCTTCCGTCGCCACCCACCCGGCCAAGATTCAGTGCAACTC
rJMFF006O20+ CCACCGAGGCTCCTCCTTGCCTTCCGTCGCCACCCACCCGGCCAAGATTCAGTGCAACTC
rJMSF031L07+ CCACCGAGGCTCCTCCTTGCCTTCCGTCGCCACCCACCCGGCCAAGATTCAGTGCAACTC
____________________________________________________________
consensus CCACCGAGGCTCCTCCTTGCCTTCCGTCGCCACCCACCCGGCCAAGATTCAGTGCAACTC
. : . : . : . : . : . :
rJMSF001D22+ CGGATTCCGTGTCATGAGCTCTAACGCCCCCAACCCTAACATCCTTGTCGGCGCCGTCGT
rJMFF006O20+ CGGATTCCGTGTCATGAGCTCTAACGCCCCCAACCCTAACATCCTTGTCGGCGCCGTCGT
rJMSF031L07+ CGGATTCCGTGTCATGAGCTCTAACGCCCCCAACCCTAACATCCTTGTCGGCGCCGTCGT
____________________________________________________________
consensus CGGATTCCGTGTCATGAGCTCTAACGCCCCCAACCCTAACATCCTTGTCGGCGCCGTCGT
. : . : . : . : . : . :
rJMSF001D22+ CGGCGGCCCCGACCAGCAGGACCGGTTTCCGGACCAACGCTCTGTCTACGAGCAGTCGGA
rJMFF006O20+ CGGCGGCCCCGACCAGCAGGACCGGTTTCCGGACCAACGCTCTGACTACGAGCAGTCGGA
rJMSF031L07+ CGGCGGCCCCGACCAGCAGGACCGGTTTCCGGACCAACGCTCTGACTACGAGCAGTCGGA
____________________________________________________________
consensus CGGCGGCCCCGACCAGCAGGACCGGTTTCCGGACCAACGCTCTGACTACGAGCAGTCGGA
. : . : . : . : . : . :
rJMSF001D22+ GCCGTCGACCTATATCAACGCGCCCCTCGTCGGAGCTCTGGCGTATCTCGCCCACTCATT
rJMFF006O20+ GCCGTCGACCTATATCAACGCGCCCCTCGTCGGAGCTCTGGCGTATCTCGCCCACTCATT
rJMSF031L07+ GCCGTCGACCTATATCAACGCGCCCCTCGTCGGAGCTCTGGCGTATCTCGCCCACTCATT
____________________________________________________________
consensus GCCGTCGACCTATATCAACGCGCCCCTCGTCGGAGCTCTGGCGTATCTCGCCCACTCATT
. : . : . : . : . : . :
rJMSF001D22+ TGGCCAACTTTAGAAGCAGCTAGAAGATGATCAAATGAATTTCTTATGT
rJMFF006O20+ TGGCCAACTTTAGAAGCAGCTAGAAGATGATCAAATGAATTTCTTATGTTAATCAACTAC
rJMSF031L07+ TGGCCAACTTTAGAAGCAGCTAGAAGATGATCAAATGAATTTCTTATGTTAATCAACTAC
____________________________________________________________
consensus TGGCCAACTTTAGAAGCAGCTAGAAGATGATCAAATGAATTTCTTATGTTAATCAACTAC
. : . : . : . : . : . :
rJMFF006O20+ TTTTACTACTAATTAATC
rJMSF031L07+ TTTTACTACTAATTAATCTGTATCTTGAATAGCAAAAAATGGTGTATTGGACGAAACCCA
____________________________________________________________
consensus TTTTACTACTAATTAATCTGTATCTTGAATAGCAAAAAATGGTGTATTGGACGAAACCCA
. : . : . : . : . : . :
rJMSF031L07+ TTACCCAAAAACCTTGAGCACAGTGATCAAGGTTTAACACCATTTATATATATCTCTAAT
____________________________________________________________
consensus TTACCCAAAAACCTTGAGCACAGTGATCAAGGTTTAACACCATTTATATATATCTCTAAT