Contig 014018:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015M07Sequence583001634 (5)ref|XP_004233270.1|3e-64PREDICTED: allantoate deiminase [Solanum lycopersicum]460014018 (4)ref|XP_006365002.1|4e-84PREDICTED: allantoate deiminase-like [Solanum tuberosum]
JMFF034D17Sequence532001634 (5)ref|XP_004233270.1|8e-72PREDICTED: allantoate deiminase [Solanum lycopersicum]468014018 (4)ref|XP_006365002.1|2e-84PREDICTED: allantoate deiminase-like [Solanum tuberosum]
JMFF040M09Sequence439001634 (5)ref|XP_004233270.1|3e-36PREDICTED: allantoate deiminase [Solanum lycopersicum]581014018 (4)ref|XP_006365002.1|1e-97PREDICTED: allantoate deiminase-like [Solanum tuberosum]
JMSF031G14Sequence612001634 (5)ref|XP_004233270.1|4e-71PREDICTED: allantoate deiminase [Solanum lycopersicum]781014018 (4)ref|XP_006365002.1|1e-132PREDICTED: allantoate deiminase-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF031G14+                                                                    GA
                      ____________________________________________________________
consensus                                                                       GA
 
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rJMSF031G14+          CAGACAAGGTTAAAGGTGACGGTGAGAGGCACACAAGGGCATGCAGGAACGGTACCCATG
                      ____________________________________________________________
consensus             CAGACAAGGTTAAAGGTGACGGTGAGAGGCACACAAGGGCATGCAGGAACGGTACCCATG
 
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rJMFF040M09+           CTATGCGCCAAGATCCTATGGTTGCATCTGCTGAACTTGATGGTATTATTGGAAANCCT
rJMSF031G14+          GCTATGCGCCAAGATCCTATGGTTGCATCTGCTGAAC-TGATTGTATTATTGGAAAACCT
                      ____________________________________________________________
consensus             GCTATGCGCCAAGATCCTATGGTTGCATCTGCTGAACTTGATTGTATTATTGGAAAACCT
 
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rJMFF040M09+          TTGTAAACAACCCGAGTATTATCTCTCCTATGACGATGAATGCCAGACATCAACGGTGAA
rJMFF034D17+                                                      AGACATCAACGGTGAA
rJMSF031G14+          TTGTAAACAACCCGAGTATTATCTCTCCTATGACGATGAATGCCAGACATCAACGGTGAA
                      ____________________________________________________________
consensus             TTGTAAACAACCCGAGTATTATCTCTCCTATGACGATGAATGCCAGACATCAACGGTGAA
 
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rJMFF015M07+            CTCTTGCAGGGTCTCTCGTCTGTACTGTTGGAGAAATTTCAACCTGGCCAAGCGCAAG
rJMFF040M09+          ATCTCTTGCAGGGTCTCTCGTCTGTACTGTTGGAGAAATTTCAACCTGGCCAAGCGCAAG
rJMFF034D17+          ATCTCTTGCAGGGTCTCTCGTCTGTACTGTTGGAGAAATTTCAACCTGGCCAAGCGCAAG
rJMSF031G14+          ATCTCTTGCAGGGTCTCTCGTCTGTACTGTTGGAGAAATTTCAACCTGGCCAAGCGCAAG
                      ____________________________________________________________
consensus             ATCTCTTGCAGGGTCTCTCGTCTGTACTGTTGGAGAAATTTCAACCTGGCCAAGCGCAAG
 
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rJMFF015M07+          TAACGTCATACCAGGCCAGGTGAAATTCACTGTAGACATAAGGGCAATGGATGATACAGG
rJMFF040M09+          TAACGTCATACCAGGCCAGGTGAAATTCACTGTAGACATAAGGGCAATGGATGATACAGG
rJMFF034D17+          TAACGTCATACCAGNCCAGGTGAAATTCNNGGTAGACATAAGGGCAATGGATGATACAGG
rJMSF031G14+          TAACGTCATACCAGGCCAGGTGAAATTCACTGTAGACATAAGGGCAATGGATGATACAGG
                      ____________________________________________________________
consensus             TAACGTCATACCAGGCCAGGTGAAATTCACTGTAGACATAAGGGCAATGGATGATACAGG
 
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rJMFF015M07+          ACGAGAAGCTATCATCTATGAATCTTCGAACCGCATGCATCAGTTATGCGACAAGCGCAA
rJMFF040M09+          ACGAGAAGCTATCATCTATGAATCTTCGAACCGCATGCATCAGTTATGCGACAAGCGCAA
rJMFF034D17+          ACGAGAAGCTATCATCTATGAATTTTCGAATCGCATGCATCAGTTATGCGACAAGCGCAA
rJMSF031G14+          ACGAGAAGCTATCATCTATGAATTTTCGAACCGCATGCATCAGTTATGCGACAAGCGCAA
                      ____________________________________________________________
consensus             ACGAGAAGCTATCATCTATGAATTTTCGAACCGCATGCATCAGTTATGCGACAAGCGCAA
 
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rJMFF015M07+          CATTTTTTGTGTCATTGAACGCAAGCACGATGCAAATGCAGTGGTTTGCGATCGCGAACT
rJMFF040M09+          CATTTTTTGTGTCATTGAACGCAAGCACGATGCAAATGCAGTGGTTTGCGATCGCGAACT
rJMFF034D17+          CATTTTTTGTGTCATTGAACGCAAGCACGATGCAAATGCAGTGGTTTGCGATCGCGAACT
rJMSF031G14+          CATTTTTTGTGTCATTGAACGCAAGCACGATGCAAATGCAGTGGTTTGCGATCGCGAACT
                      ____________________________________________________________
consensus             CATTTTTTGTGTCATTGAACGCAAGCACGATGCAAATGCAGTGGTTTGCGATCGCGAACT
 
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rJMFF015M07+          GAGTTCGCAGCTAAAATCTGCAGCACACACCGCTTTTACAAGAATTACCGGGGAGACAAC
rJMFF040M09+          GAGTTCGCAGCTAAAATCTGCAGCACACACCGCTTTTACAAGAATTACCGGGGAGACAAC
rJMFF034D17+          GAGTTCGCAGCTAAAATCTGCAGCACACACCGCTTTTACAAGAATTACCGGGGAGACAAC
rJMSF031G14+          GAGTTCGCAGCTAAAATCTGCAGCACACACCGCTTTTACAAGAATTACCGGGGAGACAAC
                      ____________________________________________________________
consensus             GAGTTCGCAGCTAAAATCTGCAGCACACACCGCTTTTACAAGAATTACCGGGGAGACAAC
 
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rJMFF015M07+          CGACGATGATGTGCCTGTACTGATGAGTGGAGCTGGGCACGACGCAATGGCCATGTCTCG
rJMFF040M09+          CGACGATGATGTGCCTGTACTGATGAGTGGAGCTGGGCACGACGCAATGGCCATGTCTCG
rJMFF034D17+          CGACGATGATGTGCCTGTACTGATGAGTGGAGCTGGGCACGACGCAATGGCCATGTCTCG
rJMSF031G14+          CGACGATGATGTGCCTGTACTGATGAGTGGAGCTGGGCACGACGCAATGGCCATGTCTCG
                      ____________________________________________________________
consensus             CGACGATGATGTGCCTGTACTGATGAGTGGAGCTGGGCACGACGCAATGGCCATGTCTCG
 
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rJMFF015M07+          TCTAACCAAGGTCGGGATGCTATTTGTGCGGTGCCGTGGAGGCATTAGTCATTCCCCCGA
rJMFF040M09+          TCTAACCAAGGTCGGGATGCTATTTGTGCGGTGCCGTGGAGGCATTAGTCATTCCCCCGA
rJMFF034D17+          TCTAACCAAGGTCGGGATGCTATTTGTGCGCTGCCGTGGAGGCATTAGTCATTCCCCCGA
rJMSF031G14+          TCTAACCAAGGTCGGGATGCTATTTGTGCGCTGCCGTGGAGGCATTAGTCATTCCCCCGA
                      ____________________________________________________________
consensus             TCTAACCAAGGTCGGGATGCTATTTGTGCGGTGCCGTGGAGGCATTAGTCATTCCCCCGA
 
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rJMFF015M07+          AGAGCACGTGTTGGACGACGATGTTTGGGCAGCTGGTATGGC                  
rJMFF040M09+          AGAGCACGTGTTGGACGACGATGTTTGGGCAGCTGGTATGGC                  
rJMFF034D17+          AGAGCACGTGTTGGACGACGATGTTTGGGCAG                            
rJMSF031G14+          AGAGCACGTGTTGGACGACGATGTTTGGGCAGCTGGTATGGCAATCTTGGCGTTTCTGGA
                      ____________________________________________________________
consensus             AGAGCACGTGTTGGACGACGATGTTTGGGCAGCTGGTATGGCAATCTTGGCGTTTCTGGA
 
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rJMSF031G14+          GACGCTCTTGTAAGTACTCGCTCAATCCAAATACCCACGGGAGAGCCCCCTCTTGATTCA
                      ____________________________________________________________
consensus             GACGCTCTTGTAAGTACTCGCTCAATCCAAATACCCACGGGAGAGCCCCCTCTTGATTCA
 
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rJMSF031G14+          TTCGATTGATTCAACGAGCCGACGGGAGAGCCCCCTCTTGATTCTAGTTGATTCAACTAG
                      ____________________________________________________________
consensus             TTCGATTGATTCAACGAGCCGACGGGAGAGCCCCCTCTTGATTCTAGTTGATTCAACTAG