Contig 014015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031A04Sequence621014015 (2)ref|XP_006367837.1|6e-67PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03
JMSF047J22Sequence696006312 (4)ref|XP_008368520.1|5e-51PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-692014015 (2)ref|XP_009796863.1|3e-92PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047J22+ CACCAGGACTCGAGGTTGAGGATCATTCATAGGGATCTTAAAGCTAGCAACA
                      ____________________________________________________________
consensus CACCAGGACTCGAGGTTGAGGATCATTCATAGGGATCTTAAAGCTAGCAACA
 
. : . : . : . : . : . :
rJMSF047J22+ TTTTATTAGATCAAGAGATGAACCCTAAGATTTCAGATTTCGGGCTGGCAAGAATCGTTG
rJMSF031A04+ TCGGGCTGGCAAGAATCGTNG
                      ____________________________________________________________
consensus TTTTATTAGATCAAGAGATGAACCCTAAGATTTCAGATTTCGGGCTGGCAAGAATCGTTG
 
. : . : . : . : . : . :
rJMSF047J22+ AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTCTGGGATATATGCCTC
rJMSF031A04+ AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTNTGGGATATATGCCTC
                      ____________________________________________________________
consensus AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTCTGGGATATATGCCTC
 
. : . : . : . : . : . :
rJMSF047J22+ CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
rJMSF031A04+ CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
                      ____________________________________________________________
consensus CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
 
. : . : . : . : . : . :
rJMSF047J22+ TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
rJMSF031A04+ TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
                      ____________________________________________________________
consensus TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
 
. : . : . : . : . : . :
rJMSF047J22+ TGAACCTCTTAGGCCATGCATGGAAGTTTTGGATGGAAGAGAAAGCAGTGGATATGATGG
rJMSF031A04+ TGAACCTCTTAGGCCATGCATGGAAGTNTNGGATGGAAGAGAAAGCAGTGGATATGATGG
                      ____________________________________________________________
consensus TGAACCTCTTAGGCCATGCATGGAAGTTTTGGATGGAAGAGAAAGCAGTGGATATGATGG
 
. : . : . : . : . : . :
rJMSF047J22+ ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
rJMSF031A04+ ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
                      ____________________________________________________________
consensus ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
 
. : . : . : . : . : . :
rJMSF047J22+ TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
rJMSF031A04+ TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
                      ____________________________________________________________
consensus TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
 
. : . : . : . : . : . :
rJMSF047J22+ TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
rJMSF031A04+ TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
                      ____________________________________________________________
consensus TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
 
. : . : . : . : . : . :
rJMSF047J22+ GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
rJMSF031A04+ GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
                      ____________________________________________________________
consensus GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
 
. : . : . : . : . : . :
rJMSF047J22+ TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTTGATATGATTATCT
rJMSF031A04+ TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTNGATATGATTATCT
                      ____________________________________________________________
consensus TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTTGATATGATTATCT
 
. : . : . : . : . : . :
rJMSF047J22+ CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATT
rJMSF031A04+ CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATTTTAATGTTGGTGAAAGAGCA
                      ____________________________________________________________
consensus CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATTTTAATGTTGGTGAAAGAGCA