Contig 014015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031A04Sequence621014015 (2)ref|XP_006367837.1|6e-67PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03
JMSF047J22Sequence696006312 (4)ref|XP_008368520.1|5e-51PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-692014015 (2)ref|XP_009796863.1|3e-92PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03

Alignment

This contig is upended


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rJMSF047J22+                  CACCAGGACTCGAGGTTGAGGATCATTCATAGGGATCTTAAAGCTAGCAACA
                      ____________________________________________________________
consensus                     CACCAGGACTCGAGGTTGAGGATCATTCATAGGGATCTTAAAGCTAGCAACA
 
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rJMSF047J22+          TTTTATTAGATCAAGAGATGAACCCTAAGATTTCAGATTTCGGGCTGGCAAGAATCGTTG
rJMSF031A04+                                                 TCGGGCTGGCAAGAATCGTNG
                      ____________________________________________________________
consensus             TTTTATTAGATCAAGAGATGAACCCTAAGATTTCAGATTTCGGGCTGGCAAGAATCGTTG
 
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rJMSF047J22+          AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTCTGGGATATATGCCTC
rJMSF031A04+          AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTNTGGGATATATGCCTC
                      ____________________________________________________________
consensus             AAGGAAAAAGTATAGAAGCCAATACAAACAAAGTTGTTGGAACTCTGGGATATATGCCTC
 
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rJMSF047J22+          CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
rJMSF031A04+          CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
                      ____________________________________________________________
consensus             CGGAATATGCACTGGAGGGGCTCTTCTCAATCAAATCTGATGTTTTTAGTTTCGGTGTGG
 
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rJMSF047J22+          TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
rJMSF031A04+          TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
                      ____________________________________________________________
consensus             TTGTACTTGAGATCATTAGTGGAAGGAAAAACACATCATTTTTCCAATCTCAAGAATCCT
 
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rJMSF047J22+          TGAACCTCTTAGGCCATGCATGGAAGTTTTGGATGGAAGAGAAAGCAGTGGATATGATGG
rJMSF031A04+          TGAACCTCTTAGGCCATGCATGGAAGTNTNGGATGGAAGAGAAAGCAGTGGATATGATGG
                      ____________________________________________________________
consensus             TGAACCTCTTAGGCCATGCATGGAAGTTTTGGATGGAAGAGAAAGCAGTGGATATGATGG
 
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rJMSF047J22+          ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
rJMSF031A04+          ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
                      ____________________________________________________________
consensus             ATCCGGTTCTGGTCTCTTCTTGCAACCAAAGTGAAGTGTTGAGGTGCATAAATGTGGGGC
 
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rJMSF047J22+          TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
rJMSF031A04+          TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
                      ____________________________________________________________
consensus             TATTATGCGTGCAAGAAGATCCAAACGACCGGCCAACAATGTCGAATGTTGTTATAATGC
 
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rJMSF047J22+          TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
rJMSF031A04+          TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
                      ____________________________________________________________
consensus             TAGCGACTGAAAACATGAGTGTTCCACCGCCGAAGCAGCCAGCTTTTGTAGCAAGGCGGC
 
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rJMSF047J22+          GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
rJMSF031A04+          GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
                      ____________________________________________________________
consensus             GTATTTCTGAAACGCCATCTTCTTCTTCGTCCAAGATCACCGCCGAATCCCACAATGAGT
 
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rJMSF047J22+          TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTTGATATGATTATCT
rJMSF031A04+          TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTNGATATGATTATCT
                      ____________________________________________________________
consensus             TGACTATTTCAATGGTGGGTCGATAGTTAACCAATCAATACTCTTTTGATATGATTATCT
 
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rJMSF047J22+          CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATT                    
rJMSF031A04+          CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATTTTAATGTTGGTGAAAGAGCA
                      ____________________________________________________________
consensus             CAAACCAACCAATTTAAAATCAGTAAAGATGTATGAGATTTTAATGTTGGTGAAAGAGCA