Contig 014009:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036O10Sequence622014009 (6)ref|XP_006348727.1|7e-78PREDICTED: cell division topological specificity factor homolog, chloroplastic-
JMSF020M24Sequence709014009 (6)ref|XP_006348727.1|4e-94PREDICTED: cell division topological specificity factor homolog, chloroplastic-726014009 (6)ref|XP_004239086.1|1e-101PREDICTED: cell division topological specificity factor homolog, chloroplastic
JMSF030F09Sequence688014009 (6)ref|XP_006348727.1|7e-90PREDICTED: cell division topological specificity factor homolog, chloroplastic-704014009 (6)ref|XP_011075553.1|2e-85PREDICTED: cell division topological specificity factor homolog, chloroplastic-
JMSF036O18Sequence646022186702014009 (6)ref|XP_006348727.1|2e-97PREDICTED: cell division topological specificity factor homolog, chloroplastic-

Alignment

This contig is upended


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JMFN036O10-                                 TGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
JMSF030F09-               GCTGAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
JMSF020M24-                  GAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
                      ____________________________________________________________
consensus                 GCTGAGACTCTGAGAGGCTGAAAGCTTCCCACTCCCCAGCTAACCCTAACTACTCG
 
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JMFN036O10-           TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
JMSF030F09-           TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
JMSF020M24-           TCGTCCCCGAAACGTGTGACCTGGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
                      ____________________________________________________________
consensus             TCGTCCCCGAAACGTGTGACCTAGCAATTCATTTATCCACCAAAATCCTTCAGAGATAGG
 
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JMFN036O10-           ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
JMSF030F09-           ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
JMSF020M24-           ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
                      ____________________________________________________________
consensus             ATTAGCAAAAGGAAATGGCAATATCGGGAGATCTCCGGGTCTCTGCTGCACTGGGTCGGT
 
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JMFN036O10-           ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
JMSF030F09-           ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
JMSF020M24-           ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
                      ____________________________________________________________
consensus             ATCCGAACAACTCAATTCGGAGCTCAAAGCATCATCCTTCCCCTTCCAAGGTAGACTTTA
 
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JMFN036O10-           GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
JMSF030F09-           GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
JMSF020M24-           GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
rJMSF036O18+                                      TTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
rJMSF020M24+                                TAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
                      ____________________________________________________________
consensus             GTGTCTTCCTTAATGGCGGTTCTAATGCTTCCGAGCTTGTGTTTAGAGGGTCACGCGCAG
 
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JMFN036O10-           CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
JMSF030F09-           CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
JMSF020M24-           CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
rJMSF036O18+          CACCTGATGGACA-CATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
rJMSF020M24+          CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
                      ____________________________________________________________
consensus             CACCTGATGGACATAATTTGCAATGTCACGCCAAAAAGCCCATTGGGGTCCTTGGGGATT
 
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JMFN036O10-           ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
JMSF030F09-           ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
JMSF020M24-           ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGATAGCTTCCTTCTTAATGCTATCA
rJMSF036O18+          ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
rJMSF020M24+          ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGATAGCTTCCTTCTTAATGCTATCA
rJMSF030F09+                          TTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
                      ____________________________________________________________
consensus             ACAAGCTGTCCTCGAATTTCATGGGCCAAGAGTTCGACAGCTTCCTTCTTAATGCTATCA
 
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JMFN036O10-           ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
JMSF030F09-           ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
JMSF020M24-           ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF036O18+          ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF020M24+          ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
rJMSF030F09+          ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
                      ____________________________________________________________
consensus             ACATGAGCTTTTTCGAGCGCCTAAGCTTGGCTTGGAAGATAATGTTCCCACCATCGCTGT
 
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JMFN036O10-           CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
JMSF030F09-           CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
JMSF020M24-           CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF036O18+          CAAGGAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF020M24+          CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
rJMSF030F09+          CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
                      ____________________________________________________________
consensus             CAAGAAGGAATTCCAATGCAAACATTGCCAAACAGCGGTTGAAGATGATCCTCTTCTCCG
 
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JMFN036O10-           ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
JMSF030F09-           ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
JMSF020M24-           ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF036O18+          ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF020M24+          ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
rJMSF030F09+          ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
                      ____________________________________________________________
consensus             ATCGATGTGCAGTGAGCGACGAGGCCAAGCAGAAGATAGTCAGCAACATTGTGAGTGTCC
 
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JMFN036O10-           TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTG                
JMSF030F09-           TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
JMSF020M24-           TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF036O18+          TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF020M24+          TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
rJMSF030F09+          TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
                      ____________________________________________________________
consensus             TCTCCGATTTCGTGGAGATAGAATCGCAGGATAAAGTTCAGCTGAGTGTCTCCACAGACC
 
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JMSF030F09-           CCGACCTCGGGACTATCTACTCTGTCACGGTC                            
JMSF020M24-           CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGNTCGGCGCGTACGATCAGA     
rJMSF036O18+          CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
rJMSF020M24+          CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
rJMSF030F09+          CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
                      ____________________________________________________________
consensus             CCGACCTCGGGACTATCTACTCTGTCACGGTCCCTGTTCGGCGCGTACGATCAGAGTACC
 
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rJMSF036O18+          AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
rJMSF020M24+          AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
rJMSF030F09+          AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
                      ____________________________________________________________
consensus             AATTGGATGATCCAACCGGAACAATCACAAATGTTGAGTACAAAGATACTGGAGAAGACT
 
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rJMSF036O18+          CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
rJMSF020M24+          CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
rJMSF030F09+          CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
                      ____________________________________________________________
consensus             CTGGTTCTGTCGATGTCAAGTTTGATTTCTACATTCCTGGGTAGAATTTAGAAGAGCTCA
 
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rJMSF036O18+          ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
rJMSF020M24+          ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
rJMSF030F09+          ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
                      ____________________________________________________________
consensus             ATGATTGCCAATCTGGGCGGGAAGAAGGAATGCTTGTTTGTCAATCACAAGTTTTTATTT
 
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rJMSF036O18+          TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
rJMSF020M24+          TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
rJMSF030F09+          TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
                      ____________________________________________________________
consensus             TCATTTCATATTTTCCTTCAGCATGGCAACTGGCTACTGCTATTCTTGTGTTTTCCATCT
 
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rJMSF036O18+          TGTGGGATGAG                                                 
rJMSF020M24+          TGTGGGATGAGTTAATTAGGTTTGTATA                                
rJMSF030F09+          TGTGGGATGAGTTAATTAGGTTTGTATATATAATATTTTTTTTTCTACCAGTGTTTAAAA
                      ____________________________________________________________
consensus             TGTGGGATGAGTTAATTAGGTTTGTATATATAATATTTTTTTTTCTACCAGTGTTTAAAA
 
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rJMSF030F09+          GTGTTGCTTTTAGTACCATACTGCCTTTCCTCACAAGAATGGTATGCCAATCAAGACATA
                      ____________________________________________________________
consensus             GTGTTGCTTTTAGTACCATACTGCCTTTCCTCACAAGAATGGTATGCCAATCAAGACATA