Contig 014006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030N09Sequence614014006 (2)sp|P46423.1|GSTF_HYOMU1e-59RecName: Full=Glutathione S-transferase; AltName: Full=25 kDa auxin-binding pro
JMSF029P21Sequence631003301 (21)sp|P46423.1|GSTF_HYOMU2e-94RecName: Full=Glutathione S-transferase; AltName: Full=25 kDa auxin-binding pro609014006 (2)gb|ABQ96852.1|2e-69glutathione S-transferase [Solanum commersonii]

Alignment

This contig is upended


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rJMSF029P21-                                                             TAATGCAAT
                      ____________________________________________________________
consensus                                                                TAATGCAAT
 
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rJMSF029P21-          CACACATAAGCCAGCTTAATCTCACATATGGGAATCCACACAACCAAAAACAGACACGTC
                      ____________________________________________________________
consensus             CACACATAAGCCAGCTTAATCTCACATATGGGAATCCACACAACCAAAAACAGACACGTC
 
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rJMSF029P21-          CAGTACAAGATAACAAGATGAACATCCAAAACATAAACCACACCAAAGTGGTTACGTTGT
                      ____________________________________________________________
consensus             CAGTACAAGATAACAAGATGAACATCCAAAACATAAACCACACCAAAGTGGTTACGTTGT
 
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JMFN030N09+                                            TTTGAAATTATCCCGATTTCTGTTTGA
rJMSF029P21-          TTGATTTACGAGAAATTAAAAGTCTGCAACCCCTTTGAAATTATCCCGATTTCTGTTTGA
                      ____________________________________________________________
consensus             TTGATTTACGAGAAATTAAAAGTCTGCAACCCCTTTGAAATTATCCCGATTTCTGTTTGA
 
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JMFN030N09+           GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
rJMSF029P21-          GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
                      ____________________________________________________________
consensus             GCAATTCTTGAACCTTTGACCAGGCAGGCCTGGCCAAAATATCGGCGACCCATTGGGAAA
 
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JMFN030N09+           CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
rJMSF029P21-          CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
                      ____________________________________________________________
consensus             CTTTTGGGCGTGCATCAAACAGGGCCTTAACTTTAGTAGCCATGAGGTAGTTTATGAGAG
 
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JMFN030N09+           GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
rJMSF029P21-          GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
                      ____________________________________________________________
consensus             GAATGTGGTGAAGATCGACCAAAGTGAAGCAGTCTCCGCCCAGGTATTCCGATTCCTTCA
 
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JMFN030N09+           ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
rJMSF029P21-          ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
                      ____________________________________________________________
consensus             ACCGTGCCTCGTAGACATCGAGAACTTTACCTAGTTGCTCCTCGTACTGCGCCACCACCA
 
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JMFN030N09+           CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
rJMSF029P21-          CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
                      ____________________________________________________________
consensus             CATCGTCCGCCGTCATGCCCATTAACGGCTTTATAACGGTCTCGTAGCTGAGCTTGGAAG
 
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JMFN030N09+           CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
rJMSF029P21-          CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
                      ____________________________________________________________
consensus             CTGCAGGGTCGAATTTCTGAGCCTCAACCTCCATCCACACCGACATGATCGCCATCTTCT
 
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JMFN030N09+           TGTGATCTGGGACGATCAGCTG                                      
rJMSF029P21-          TGTGATCTGGGACGATCAGCTGCGTCCCCTTGTCAACATACGTGTGCGCGATGTACTGTG
                      ____________________________________________________________
consensus             TGTGATCTGGGACGATCAGCTGCGTCCCCTTGTCAACATACGTGTGCGCGATGTACTGTG