Contig 014005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027M16Sequence776014005 (2)ref|XP_004241982.1|3e-123PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like
JMSF029O20Sequence615008987 (2)ref|XP_006361159.1|78.2PREDICTED: uncharacterized protein LOC102599225 [Solanum tuberosum]734014005 (2)ref|XP_004241982.1|1e-122PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like

Alignment

This contig is upended


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rJMSF027M16+             CNTAAAGGTTGTGACTGTACCGGTAAATGTTCTGATTCCAAAAGTGCGCATGTGCAG
rJMSF029O20+                                                        GTGCGCATGTGCAG
                      ____________________________________________________________
consensus                CNTAAAGGTTGTGACTGTACCGGTAAATGTTCTGATTCCAAAAGTGCGCATGTGCAG
 
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rJMSF027M16+          TCCGAAATGGAGGTGAACTTCCATACAACCGTAATGGGGCCATAGTTGAAGTGAAACCTC
rJMSF029O20+          TCCGAAATGGAGGTGAACTTCCATACAACCGTAATGGGGCCATAGTTGAAGTGAAACCTC
                      ____________________________________________________________
consensus             TCCGAAATGGAGGTGAACTTCCATACAACCGTAATGGGGCCATAGTTGAAGTGAAACCTC
 
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rJMSF027M16+          TTGTATATGAGTGTGGTCCTCATTGTAAGTGTCCACCTTCTTGCTATAACAGAGTCAGCC
rJMSF029O20+          TTGTATATGAGTGTGGTCCTCATTGTAAGTGTCCACCTTCTTGCTATAACAGAGTCAGCC
                      ____________________________________________________________
consensus             TTGTATATGAGTGTGGTCCTCATTGTAAGTGTCCACCTTCTTGCTATAACAGAGTCAGCC
 
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rJMSF027M16+          AGAACGGTATCAAGATTCAATTGGAGATCTTCAAGACTGAGTCACGGGGCTGGGGTGTCA
rJMSF029O20+          AGAACGGTATCAAGATTCAATTGGAGATCTTCAAGACTGAGTCACGGGGCTGGGGTGTCA
                      ____________________________________________________________
consensus             AGAACGGTATCAAGATTCAATTGGAGATCTTCAAGACTGAGTCACGGGGCTGGGGTGTCA
 
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rJMSF027M16+          GATCCCTGACTTCTATTCCTTCAGGAACCTTTATATGTGAGTATGCAGGAGAGCTTCTTG
rJMSF029O20+          GATCCCTGACTTCTATTCCTTCAGGAACCTTTATATGTGAGTATGCAGGAGAGCTTCTTG
                      ____________________________________________________________
consensus             GATCCCTGACTTCTATTCCTTCAGGAACCTTTATATGTGAGTATGCAGGAGAGCTTCTTG
 
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rJMSF027M16+          AAGACAAGGAAGCTGAACGAAGGATTGGTAGTGATGAGTATCTTTTTGATATTGGCCATA
rJMSF029O20+          AAGACAAGGAAGCTGAACGAAGGATTGGTAGTGATGAGTATCTTTTTGATATTGGCCATA
                      ____________________________________________________________
consensus             AAGACAAGGAAGCTGAACGAAGGATTGGTAGTGATGAGTATCTTTTTGATATTGGCCATA
 
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rJMSF027M16+          ACTATAGTGACTGTTCTATCAATCCTTCTGGACAAAAATGTACTAGTAGTGAGCAGGTTG
rJMSF029O20+          ACTATAGTGACTGTTCTATCAATCCTTCTGGACAAAAATGTACTAGTAGTGAGCAGGTTG
                      ____________________________________________________________
consensus             ACTATAGTGACTGTTCTATCAATCCTTCTGGACAAAAATGTACTAGTAGTGAGCAGGTTG
 
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rJMSF027M16+          AAGAAGTTGGCCATACCATTGATGCAGCAGAGTATGGGAATGTCGGAAGGTTTATCAATC
rJMSF029O20+          AAGAAGTTGGCCATACCATTGATGCAGCAGAGTATGGGAATGTCGGAAGGTTTATCAATC
                      ____________________________________________________________
consensus             AAGAAGTTGGCCATACCATTGATGCAGCAGAGTATGGGAATGTCGGAAGGTTTATCAATC
 
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rJMSF027M16+          ACAGCTGTTCGCCTAACCTCTATGCACAAAATGTCCTTTATGACTATGATGACAGAAAAG
rJMSF029O20+          ACAGCTGTTCGCCTAACCTCTATGCACAAAATGTCCTTTATGACTATGATGACAGAAAAG
                      ____________________________________________________________
consensus             ACAGCTGTTCGCCTAACCTCTATGCACAAAATGTCCTTTATGACTATGATGACAGAAAAG
 
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rJMSF027M16+          TGCCGCATATCATGCTCTTTGCTGTAGAGAATATTTCTCCATTACGAGAGCTGACTTATC
rJMSF029O20+          TGCCGCATATCATGCTCTTTGCTGTAGAGAATATTTCTCCATTACGAGAGCTGACTTATC
                      ____________________________________________________________
consensus             TGCCGCATATCATGCTCTTTGCTGTAGAGAATATTTCTCCATTACGAGAGCTGACTTATC
 
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rJMSF027M16+          ACTATAATTATACAGTGGATCAGGTTCGTGATTCCAGTGGAAACATCAAGGTAAAACAAT
rJMSF029O20+          ACTATAATTATACAGTGGATCAGGTTCGTGATTCCAGTGGAAACATCAAGGTAAAACAAT
                      ____________________________________________________________
consensus             ACTATAATTATACAGTGGATCAGGTTCGTGATTCCAGTGGAAACATCAAGGTAAAACAAT
 
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rJMSF027M16+          GCTTTTGTGGATCTGCTGAGTGTACCGGTAGGCTGTATTAGTTGGTCTTTAAGGGTCTCT
rJMSF029O20+          GCTTTTGTGGATCTGCTGAGTGTACCGGTAGGCTGTATTAGTTGGTCTTTAAGGGTCTCT
                      ____________________________________________________________
consensus             GCTTTTGTGGATCTGCTGAGTGTACCGGTAGGCTGTATTAGTTGGTCTTTAAGGGTCTCT
 
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rJMSF027M16+          CCTCAAGGGTGGGTTCAGGTTTTTCCTCATTACCTAATGTAAGCTCTTTCTTTAGCTTG 
rJMSF029O20+          CCTCAAGGGTGGGTTCAGGTTTTTCCTCATTACCTAATGTAAGCTCTTTCTTTAGCTTGT
                      ____________________________________________________________
consensus             CCTCAAGGGTGGGTTCAGGTTTTTCCTCATTACCTAATGTAAGCTCTTTCTTTAGCTTGT