Contig 014002:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF029D17-                                              GATGAGTAGGATTCGCACAACCACT
                      ____________________________________________________________
consensus                                                GATGAGTAGGATTCGCACAACCACT
 
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JMSF029D17-           AAGCCCAATACCATTTTCCCCTCGGAAGCAACTAGCAAGCAGTCCACGACTACGCTAGTG
                      ____________________________________________________________
consensus             AAGCCCAATACCATTTTCCCCTCGGAAGCAACTAGCAAGCAGTCCACGACTACGCTAGTG
 
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JMSF029D17-           TGACCATTTTTGACGGCAGCAATCGCTCTCTATGGCCTCAAGATCCGCCGTCATCGCGTG
                      ____________________________________________________________
consensus             TGACCATTTTTGACGGCAGCAATCGCTCTCTATGGCCTCAAGATCCGCCGTCATCGCGTG
 
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JMSF029D17-           GGGCTCAGGAGAAGATGGGCAGTTAGGAATAGGGGATGACGAAGAGAAAGAATGGGTTTG
                      ____________________________________________________________
consensus             GGGCTCAGGAGAAGATGGGCAGTTAGGAATAGGGGATGACGAAGAGAAAGAATGGGTTTG
 
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JMSF029D17-           CTCTATCAAAGCACTCCAGAACGAGAAGGTTTCCTCAGTTGTCGCCGGCAGCAGGAACTC
                      ____________________________________________________________
consensus             CTCTATCAAAGCACTCCAGAACGAGAAGGTTTCCTCAGTTGTCGCCGGCAGCAGGAACTC
 
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JMSF029D17-           TCTCGCCATCTGTGAAAACGGCCAGTTGTTTACATGGGGTTGGAATCAAAGAGGGACCTT
                      ____________________________________________________________
consensus             TCTCGCCATCTGTGAAAACGGCCAGTTGTTTACATGGGGTTGGAATCAAAGAGGGACCTT
 
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JMSF029D17-           GGGACACGCACCGATATCTAAGACTGAGAATATTCCCAGTCAGGTTAAGGCTCTTGCTAA
                      ____________________________________________________________
consensus             GGGACACGCACCGATATCTAAGACTGAGAATATTCCCAGTCAGGTTAAGGCTCTTGCTAA
 
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JMSF029D17-           TGTCAAAATTGTCCAGGCAGCTATTGGTGGATGGCATTGTCTGGCTGTTGATGACCAAGG
                      ____________________________________________________________
consensus             TGTCAAAATTGTCCAGGCAGCTATTGGTGGATGGCATTGTCTGGCTGTTGATGACCAAGG
 
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JMSF029D17-           CCGAGCTTATGCTTGGGGTGGGAACGAGTATGGGCAGTGTGGTGAAGAACCAGAGAGGAA
                      ____________________________________________________________
consensus             CCGAGCTTATGCTTGGGGTGGGAACGAGTATGGGCAGTGTGGTGAAGAACCAGAGAGGAA
 
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JMSF029D17-           AGATGACACTGGGAAGCCTGTGAGGAGGGATATTGGAACTCCACAGCGATGTGTGCCAAA
                      ____________________________________________________________
consensus             AGATGACACTGGGAAGCCTGTGAGGAGGGATATTGGAACTCCACAGCGATGTGTGCCAAA
 
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JMSF029D17-           GCTTTCGGTTCGTCAGGTAGCTGCAGGTGGCACTCATTCGGTGGTTCTTACAAAGGAAGG
rJMSF029D17+                 GTTCGTCAGGTAGCTGCAGGTNGCACTCATTCGGTGGTT-TTACAAAGGAAGG
                      ____________________________________________________________
consensus             GCTTTCGGTTCGTCAGGTAGCTGCAGGTGGCACTCATTCGGTGGTTCTTACAAAGGAAGG
 
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JMSF029D17-           GCATGTATGGACATGGGGTCAACCATGGCCTCCTGGGGACAT                  
rJMSF029D17+          GCATGTATGGACATGGGGTCAACCATGGCCTCCTGGGGACATAAAGCAAATATCCACGCC
                      ____________________________________________________________
consensus             GCATGTATGGACATGGGGTCAACCATGGCCTCCTGGGGACATAAAGCAAATATCCACGCC
 
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rJMSF029D17+          CGTTCGAGTACAAGGCCTTGCAAGTGTAAGGCTAATTGCAGTTGGAGCTTTTCACAACTT
                      ____________________________________________________________
consensus             CGTTCGAGTACAAGGCCTTGCAAGTGTAAGGCTAATTGCAGTTGGAGCTTTTCACAACTT
 
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rJMSF029D17+          GGCTCTTCTTGATGATGGAGCTTTGATGGCATGGGGTAATAATGAGTATGGACAACTAGG
                      ____________________________________________________________
consensus             GGCTCTTCTTGATGATGGAGCTTTGATGGCATGGGGTAATAATGAGTATGGACAACTAGG
 
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rJMSF029D17+          AACAGGGGATACCCAGCCAAGATCACAACCCATCCCTGTTCAAGGACTGCTGGGTCTTTC
                      ____________________________________________________________
consensus             AACAGGGGATACCCAGCCAAGATCACAACCCATCCCTGTTCAAGGACTGCTGGGTCTTTC
 
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rJMSF029D17+          ACTGGTTGATATTGCTGCTGGAGGATGGCATTCTGCAGCATTGACAGAAGAAGGGGAGGT
                      ____________________________________________________________
consensus             ACTGGTTGATATTGCTGCTGGAGGATGGCATTCTGCAGCATTGACAGAAGAAGGGGAGGT
 
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rJMSF029D17+          TTATGGTTGGGGCAGAGGGGAACATGGAAGGCTCGGCTTTGGGGATGATAAGAGCAGTAA
                      ____________________________________________________________
consensus             TTATGGTTGGGGCAGAGGGGAACATGGAAGGCTCGGCTTTGGGGATGATAAGAGCAGTAA
 
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rJMSF029D17+          AATGGTGCCACAAAAGGTTCAACTTCTATCTGGGGAGAATATTGTACAGATCTCGTGTGG
                      ____________________________________________________________
consensus             AATGGTGCCACAAAAGGTTCAACTTCTATCTGGGGAGAATATTGTACAGATCTCGTGTGG
 
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rJMSF029D17+          AGGGACCCACTCTGTGGCACTAACACGGGATGGCCGCATGTTTTCTTTCGGGCGAGGAGA
                      ____________________________________________________________
consensus             AGGGACCCACTCTGTGGCACTAACACGGGATGGCCGCATGTTTTCTTTCGGGCGAGGAGA
 
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rJMSF029D17+          CCATGGACGACTAGGATACGGGAGAAAGGTGACAACTGGTCATCCTTCGGAAGTGCCCAT
                      ____________________________________________________________
consensus             CCATGGACGACTAGGATACGGGAGAAAGGTGACAACTGGTCATCCTTCGGAAGTGCCCAT
 
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rJMSF029D17+          CAACATTCCACCTCCAAAGGATCTGAGCGACGCTGAAGGACAGTGGTGCGCTACACTCGT
                      ____________________________________________________________
consensus             CAACATTCCACCTCCAAAGGATCTGAGCGACGCTGAAGGACAGTGGTGCGCTACACTCGT
 
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rJMSF029D17+          GGCGTGTGGGGGCCGCCATACGCTGGCACTCGTAAACTGGCACACACGCGAACCTGAACA
                      ____________________________________________________________
consensus             GGCGTGTGGGGGCCGCCATACGCTGGCACTCGTAAACTGGCACACACGCGAACCTGAACA
 
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rJMSF029D17+          GCCTCTGTGAAGTTCGCTCACTACTTTATATAGTATTAGAACTCTGGTAGAGATTGGCTT
                      ____________________________________________________________
consensus             GCCTCTGTGAAGTTCGCTCACTACTTTATATAGTATTAGAACTCTGGTAGAGATTGGCTT