Contig 013999:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023K17Sequence569013999 (6)emb|CDP10639.1|3e-90unnamed protein product [Coffea canephora]699013999 (6)emb|CDP10639.1|5e-100unnamed protein product [Coffea canephora]
JMSF029A15Sequence573013999 (6)emb|CDP10639.1|2e-93unnamed protein product [Coffea canephora]776013999 (6)emb|CDP10639.1|2e-99unnamed protein product [Coffea canephora]
JMSF037H04Sequence576013999 (6)emb|CDP10639.1|1e-92unnamed protein product [Coffea canephora]749013999 (6)emb|CDP10639.1|3e-97unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF037H04-             GACGCGACTGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAACGCCTGCCTCC
JMSF029A15-                      GAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAACGCCTGCCTCC
JMSF023K17-                      GAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAACGCCNGCCTCC
                      ____________________________________________________________
consensus               GACGCGACTGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAAACGCCTGCCTCC
 
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JMSF037H04-           GGGGAGATGTGGCCGAGCACAGAANGAGGGCCGCCGGAGGTCACACTGGAGACCTCANTG
JMSF029A15-           GGGGAGATGTGGCCGAGCACAGAANGAGGGCCGCCGGAGGTCACACTGGAGACCTCANTG
JMSF023K17-           GGGGAGATGTGGCCGAGCACAGAANGAGGGCCGCCGGAGGTCACACTGGAGACCTCANTG
rJMSF023K17+           GGGAGATGTGGCCGAGCACAGAAGGAGGGCCGCCGGAGGTCACACTGGAGACCTCAATG
rJMSF037H04+                      CCGAGCACAGAAGGAGGGCCGCCGGAGGTCACACTGGAGACCTCAATG
rJMSF029A15+              AGATGTGGCCGAGCACAGAAGGAGGGCCGCCGGAGGTCACACTGGAGACCTCAATG
                      ____________________________________________________________
consensus             GGGGAGATGTGGCCGAGCACAGAAGGAGGGCCGCCGGAGGTCACACTGGAGACCTCAATG
 
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JMSF037H04-           GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
JMSF029A15-           GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
JMSF023K17-           GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCNGAACTTCATT
rJMSF023K17+          GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
rJMSF037H04+          GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
rJMSF029A15+          GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
                      ____________________________________________________________
consensus             GGCTCTTTTACAGTTGAGATGTACTACAAGCATGCACCGAGAACCTGCCGGAACTTCATT
 
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JMSF037H04-           GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCANGGATTTC
JMSF029A15-           GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCANGGATTTC
JMSF023K17-           GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATANAATCATCANGGATTTC
rJMSF023K17+          GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCAAGGATTTC
rJMSF037H04+          GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCAAGGATTTC
rJMSF029A15+          GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCAAGGATTTC
                      ____________________________________________________________
consensus             GAGCTTTCTCGCCGGGGTTATTATGACAACGTTAAGTTCCATAGAATCATCAAGGATTTC
 
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JMSF037H04-           ATTGTGCANGGTGGCGACCCAACTGGTACTGGAAGAGGANGAGAATCCNTTTATGGGCCA
JMSF029A15-           ATTGTGCANGGTGGCGACCCAACTGGTACTGGAAGAGGANGAGAATCCNTTTATGGGCCA
JMSF023K17-           NTTGTGCANGGTGGCNACCCAACTGGTACTGGAAGAGGANGAGAATCCNTTTATGGGCCA
rJMSF023K17+          ATTGTGCAAGGTGGCGACCCAACTGGTACTGGAAGAGGAGGAGAATCCATTTATGGGCCA
rJMSF037H04+          ATTGTGCAAGGTGGCGACCCAACTGGTACTGGAAGAGGAGGAGAATCCATTTATGGGCCA
rJMSF029A15+          ATTGTGCAAGGTGGCGACCCAACTGGTACTGGAAGAGGAGGAGAATCCATTTATGGGCCA
                      ____________________________________________________________
consensus             ATTGTGCAAGGTGGCGACCCAACTGGTACTGGAAGAGGAGGAGAATCCATTTATGGGCCA
 
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JMSF037H04-           AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
JMSF029A15-           AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
JMSF023K17-           AAATTTGAGGACGAGATTACCCCACAATTAANACATACTGGAGCAGGTATTATGTCTATG
rJMSF023K17+          AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
rJMSF037H04+          AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
rJMSF029A15+          AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
                      ____________________________________________________________
consensus             AAATTTGAGGACGAGATTACCCCACAATTAAAACATACTGGAGCAGGTATTATGTCTATG
 
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JMSF037H04-           GCCAATGCTGGACCTAACTCANATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
JMSF029A15-           GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
JMSF023K17-           GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
rJMSF023K17+          GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
rJMSF037H04+          GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
rJMSF029A15+          GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
                      ____________________________________________________________
consensus             GCCAATGCTGGACCTAACTCAAATGGGAGCCAGTTCTTTATTACCTTGGCACCTGCACAA
 
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JMSF037H04-           TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
JMSF029A15-           TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
JMSF023K17-           TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
rJMSF023K17+          TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
rJMSF037H04+          TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
rJMSF029A15+          TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
                      ____________________________________________________________
consensus             TCACTGGATGGTAAGCATACCATATTTGGAAGAGTATGTCGAGGAATGGAAATCATCAAG
 
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JMSF037H04-           AGACTTGGCAGTGTTCAAACTGATAACACTGATANACCCATCCGTGATGTGAAGATACTA
JMSF029A15-           AGACTTGGCAGTGTTCAAACTGATAACACTGATANACCCATCCGTGATGTGAAGATACTA
JMSF023K17-           AGACTTGGCAGTGTTCAAACTGATNACACTGATAGACCCATCCGTGATGTGAAGATACTA
rJMSF023K17+          AGACTTGGCAGTGTTCAAACTGATAACACTGATAGACCCATCCATGATGTGAAGATACTA
rJMSF037H04+          AGACTTGGCAGTGTTCAAACTGATAACACTGATAGACCCATCCATGATGTGAAGATACTA
rJMSF029A15+          AGACTTGGCAGTGTTCAAACTGATAACACTGATAGACCCATCCATGATGTGAAGATACTA
                      ____________________________________________________________
consensus             AGACTTGGCAGTGTTCAAACTGATAACACTGATAGACCCATCCGTGATGTGAAGATACTA
 
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JMSF037H04-           AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTA                      
JMSF029A15-           AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAG                     
JMSF023K17-           AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAG                     
rJMSF023K17+          AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAGCAGAAGCACCCTAGTTTTTTG
rJMSF037H04+          AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAGCAGAAGCACCCTAGTTTTTTG
rJMSF029A15+          AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAGCAGAAGCACCCTAGTTTTTTG
                      ____________________________________________________________
consensus             AGGGCAACTGTCAAAGATTGATTGATATTTGTTTAGTAGCAGAAGCACCCTAGTTTTTTG
 
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rJMSF023K17+          ACAGCAGCTATGGAGATGATGCTATAGTCAGCTGTACCTTGTACTTGAGAGTTGGAGAAA
rJMSF037H04+          ACAGCAGCTATGGAGATGATGCTATAGTCAGCTGTACCTTGTACTTGAGAGTTGGAGAAA
rJMSF029A15+          ACAGCAGCTATGGAGATGATGCTATAGTCAGCTGTACCTTGTACTTGAGAGTTGGAGAAA
                      ____________________________________________________________
consensus             ACAGCAGCTATGGAGATGATGCTATAGTCAGCTGTACCTTGTACTTGAGAGTTGGAGAAA
 
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rJMSF023K17+          CTCCATTGATACTGAGATAGACTTCATTTCTAAGCATATTTTAAAGCATTTAAACTTTCT
rJMSF037H04+          CTCCATTGATACTGAGATAGACTTCATTTCTAAGCATATTTTAAAGCATTTAAACTTTCT
rJMSF029A15+          CTCCATTGATACTGAGATAGACTTCATTTCTAAGCATATTTTAAAGCATTTAAACTTTCT
                      ____________________________________________________________
consensus             CTCCATTGATACTGAGATAGACTTCATTTCTAAGCATATTTTAAAGCATTTAAACTTTCT
 
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rJMSF023K17+          CCAGGCTGGCTTCATTTAGCTTGTATTCCTGCCAATTGTT                    
rJMSF037H04+          CCAGGCTGGCTTCATTTAGCTTGTATTCCTGCCAATTGTTATTATCTGTATGAATGGTAA
rJMSF029A15+          CCAGGCTGGCTTCATTTAGCTTGTATTCCTGCCAATTGTTATTATCTGTATGAATGGTAA
                      ____________________________________________________________
consensus             CCAGGCTGGCTTCATTTAGCTTGTATTCCTGCCAATTGTTATTATCTGTATGAATGGTAA
 
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rJMSF037H04+          GTGAAGTCTTCCTATTTGTGCTGTTAACCTATACAGTTTCC                   
rJMSF029A15+          GTGAAGTCTTCCTATTTGTGCTGTTAACCTATACAGTTTCCATGCCTGGAATGCTCTTTA
                      ____________________________________________________________
consensus             GTGAAGTCTTCCTATTTGTGCTGTTAACCTATACAGTTTCCATGCCTGGAATGCTCTTTA