| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF015A06 | Sequence | 372 | 000797 (3) | ref|XP_002522903.1| | 6e-15 | cytochrome P450, putative [Ricinus communis] gb|EEF39503.1| cytochrome P450, put | 769 | 013996 (3) | emb|CAC24711.1| | 2e-80 | cytochrome P450 [Solanum tuberosum] |
| JMSF015P24 | Sequence | 277 | 000797 (3) | ref|XP_011077043.1| | 1e-07 | PREDICTED: premnaspirodiene oxygenase-like [Sesamum indicum] | 747 | 013996 (3) | ref|XP_009606841.1| | 2e-73 | PREDICTED: 5-epiaristolochene 1,3-dihydroxylase-like, partial [Nicotiana toment |
| JMSF028I23 | Sequence | 650 | 000797 (3) | emb|CDP20259.1| | 1e-49 | unnamed protein product [Coffea canephora] | 746 | 013996 (3) | emb|CDP20313.1| | 7e-56 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF015P24+ GTGACAAA
____________________________________________________________
consensus GTGACAAA
. : . : . : . : . : . :
rJMSF015P24+ TTTGACGTTTGTGACTAGTTGAACTGCCCATTGCTTAATTAATTATCTAATAGGGTGGGT
____________________________________________________________
consensus TTTGACGTTTGTGACTAGTTGAACTGCCCATTGCTTAATTAATTATCTAATAGGGTGGGT
. : . : . : . : . : . :
rJMSF015P24+ GGGAATGTACGTAGGACATGTTTGGAGGAGCAGTGGACACATCAACGACAATCACCGTGT
rJMSF015A06+ GGAATGTATGTAGGACATGTTTGGAGGAGCAGTGGACACATCAACGACAACCACCGTGT
rJMSF028I23+ GAGCAGTGGACACATCAACGACAATCACCGTGT
____________________________________________________________
consensus GGGAATGTATGTAGGACATGTTTGGAGGAGCAGTGGACACATCAACGACAATCACCGTGT
. : . : . : . : . : . :
rJMSF015P24+ GCGCCATGGTGGAAATGGTGAAGAATCCGAGGGTGTTAGCGAAAGCACAAGCCGAAGTGA
rJMSF015A06+ GCGCCATGGTGGAAATGGTGAAGAATCCGAGGGTGTTGGCGAAAGCACAAGCCGAAGTGA
rJMSF028I23+ GCGCCATGGTGGAAATGGTGAAGAATCCGAGGGTGTTAGCGAAAGCACAAGCCGAAGTGA
____________________________________________________________
consensus GCGCCATGGTGGAAATGGTGAAGAATCCGAGGGTGTTAGCGAAAGCACAAGCCGAAGTGA
. : . : . : . : . : . :
rJMSF015P24+ GGGAAGTTTTCAAAG------GAAGGGTAGAAGAGAGCAATGTGGATAAGCTGGCATACT
rJMSF015A06+ GGGAAGTTTTCAAAGTGAAAGAAAGGCTAGAAGAGAGCGATGTGGAAAAGCTGGCATACT
rJMSF028I23+ GGGAAGTTTTCAAAG-------GAAGGTAGAAGAGAGCAATGTGGATAAGCTGGCATACT
____________________________________________________________
consensus GGGAAGTTTTCAAAG------GAAGGGTAGAAGAGAGCAATGTGGATAAGCTGGCATACT
. : . : . : . : . : . :
rJMSF015P24+ TGAATCTAGTGATCAAAGAAACTATGAGGCTTCATCCTCCAGGTCCTGTGATATACAGGG
rJMSF015A06+ TGAATCTAGTGATCAAAGAAACTATGAGGCTTCATCCTCCAGGTCCTGTGCTATACAGGG
rJMSF028I23+ TGAATCTAGTGATCAAAGAAACTATGAGGCTTCATCCTCCAGGTCCTGTGATATACAGGG
____________________________________________________________
consensus TGAATCTAGTGATCAAAGAAACTATGAGGCTTCATCCTCCAGGTCCTGTGATATACAGGG
. : . : . : . : . : . :
rJMSF015P24+ AGAACAACAAAGATAGTGTGGTGTGTGGATACACAATTCCGCCCAGAACAAGAGTTCTCA
rJMSF015A06+ AGAACAACAAAGAAAGTGTGGTGTGTGGATACACCATTCCGCCCAAAACAAGAGTTCTCA
rJMSF028I23+ AGAACAACAAAGATAGTGTGGTGTGTGGATACACAATTCCGCCCAGAACAAGAGTTCTCA
____________________________________________________________
consensus AGAACAACAAAGATAGTGTGGTGTGTGGATACACAATTCCGCCCAGAACAAGAGTTCTCA
. : . : . : . : . : . :
rJMSF015P24+ TCAACGCCTGGGCCATCAGCAGGGATCCCCAATACTGGGAAGACCCGGAGAGCTTTAAAC
rJMSF015A06+ TCAACGCCTGGGCCATCAACAGGGATCCCGAGTACTGGGAAGACCCAGAGAGCTTTAAAC
rJMSF028I23+ TCAACGCCTGGGCCATCAGCAGGGATCCCCAATACTGGGAAGACCCGGAGAGCTTTAAAC
____________________________________________________________
consensus TCAACGCCTGGGCCATCAGCAGGGATCCCCAATACTGGGAAGACCCGGAGAGCTTTAAAC
. : . : . : . : . : . :
rJMSF015P24+ CAGAGAGATTCGAGGATGACCCCATGGATTTCACTAGAAGTAGTCAGTTCAAATATATGC
rJMSF015A06+ CCGAGAGATTCGAGGATGACCCCATGGATTTCACTAGAAGTAGTCAGTTCAAATATATGC
rJMSF028I23+ CAGAGAGATTCGAGGATGACCCCATGGATTTCACTAGAAGTAGTCAGTTCAAATATATGC
____________________________________________________________
consensus CAGAGAGATTCGAGGATGACCCCATGGATTTCACTAGAAGTAGTCAGTTCAAATATATGC
. : . : . : . : . : . :
rJMSF015P24+ CATTTGGAAGTGGAAAGAGAATGTGCCCTGGCATTTCATTTGGTTTAGCAAGTGTTTACA
rJMSF015A06+ CATTTGGAAGTGGAAGGAGGATGTGCCCTGGCATTACATTTGGTTTAGCAAATGTTTACA
rJMSF028I23+ CATTTGGAAGTGGAAAGAGAATGTGCCCTGGCATTTCATTTGGTTTAGCAAGTGTTTACA
____________________________________________________________
consensus CATTTGGAAGTGGAAAGAGAATGTGCCCTGGCATTTCATTTGGTTTAGCAAGTGTTTACA
. : . : . : . : . : . :
rJMSF015P24+ CTCCTTTGGCACACTTGCTTTACCACTTTGATTGGGAACTCCCTCATGGAATCACACCTC
rJMSF015A06+ CTCCTTTGGCACACTTGCTTTACCACTTTGATTGGGAACTCCCTCATGGAACAACACCTC
rJMSF028I23+ CTCCTTTGGCACACTTGCTTTACCACTTTGATTGGGAACTCCCTCATGGAATCACACCTC
____________________________________________________________
consensus CTCCTTTGGCACACTTGCTTTACCACTTTGATTGGGAACTCCCTCATGGAATCACACCTC
. : . : . : . : . : . :
rJMSF015P24+ ATACCTTGAAGCTCACAGAGTTGCCTCGAATGGCCATGGGAGTAAAGAATGACATTTTCT
rJMSF015A06+ ATACCTTGAAGCTCACAGAGTTGCCTGGATTAGCCATGAGTGTAAAGGATGACATTTTCT
rJMSF028I23+ ATACCTTGAAGCTCACAGAGTTGCCTCGAATGGCCATGGGAGTAAAGAATGACATTTTCT
____________________________________________________________
consensus ATACCTTGAAGCTCACAGAGTTGCCTCGAATGGCCATGGGAGTAAAGAATGACATTTTCT
. : . : . : . : . : . :
rJMSF015P24+ TCATTGCTGCTGCTGCTCCTCCTACTGCT
rJMSF015A06+ TCATTGCTGCTGCTTCTCCTCCTACTGCT
rJMSF028I23+ TCATTGCTGCTGCTGCTCCTCCTACTGCTTAACTATCTTTAAATAAATAAATGTAATTAT
____________________________________________________________
consensus TCATTGCTGCTGCTGCTCCTCCTACTGCTTAACTATCTTTAAATAAATAAATGTAATTAT
. : . : . : . : . : . :
rJMSF028I23+ ATATGGAAGATGATATACCGAGGAATAAATTCAACTTCGTACAGTTGATATTATTTAGCA
____________________________________________________________
consensus ATATGGAAGATGATATACCGAGGAATAAATTCAACTTCGTACAGTTGATATTATTTAGCA
. : . : . : . : . : . :
rJMSF028I23+ CAATCGTTATACCATGGACCAGGATCCACTGTGTACTGTGGACCTTAGTCCTAAACGACG
____________________________________________________________
consensus CAATCGTTATACCATGGACCAGGATCCACTGTGTACTGTGGACCTTAGTCCTAAACGACG