| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF027D01 | Sequence | 599 | 013988 (6) | ref|XP_009758700.1| | 2e-87 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] | 700 | 013988 (6) | ref|XP_009758700.1| | 4e-84 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] |
| JMSF039K21 | Sequence | 689 | 013988 (6) | ref|XP_009758700.1| | 1e-117 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] | 840 | 013988 (6) | ref|XP_009758700.1| | 2e-124 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] |
| JMSF046G24 | Sequence | 767 | 013988 (6) | ref|XP_009758700.1| | 1e-132 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] | 758 | 013988 (6) | ref|XP_009758700.1| | 8e-115 | PREDICTED: uricase-2 isozyme 1 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF027D01- GAGTTACCGGAAAACGATCAAACTA
____________________________________________________________
consensus GAGTTACCGGAAAACGATCAAACTA
. : . : . : . : . : . :
JMSF027D01- TACATAAAAAAAAAGTTCTATCTTGGTTGTAACATACACTAATTTGGGCTGAAAATGGAG
JMSF039K21- TTGGGCTGAAAATGGAG
JMSF046G24- ATACACTAATTTGGGCTGAAAATGGAG
____________________________________________________________
consensus TACATAAAAAAAAAGTTCTATCTTGGTTGTAACATACACTAATTTGGGCTGAAAATGGAG
. : . : . : . : . : . :
JMSF027D01- GACGGATTTAAGCTGCAGCAGAGGCACGGGAAGGCCAGGGTGAGAGTTGGCCGGGTATGG
JMSF039K21- GACGGATTTAAGCTGCAGCAGAGGCACGGGAAGGCCAGGGTGAGAGTTGGCCGGGTATGG
JMSF046G24- GACGGATTTAAGCTGCAGCAGAGGCACGGGAAGGCCAGGGTGAGAGTTGGCCGGGTATGG
____________________________________________________________
consensus GACGGATTTAAGCTGCAGCAGAGGCACGGGAAGGCCAGGGTGAGAGTTGGCCGGGTATGG
. : . : . : . : . : . :
JMSF027D01- AGAGACGGAGACGGTACGCATCACTTTTCCGAATGGAACGTCAGCATAAGCCTCCTCTCC
JMSF039K21- AGAGACGGAGACGGTACGCATCACTTTTCCGAATGGAACGTCAGCATAAGCCTCCTCTCC
JMSF046G24- AGAGACGGAGACGGTACGCATCACTTTTCCGAATGGAACGTCAGCATAAGCCTCCTCTCC
____________________________________________________________
consensus AGAGACGGAGACGGTACGCATCACTTTTCCGAATGGAACGTCAGCATAAGCCTCCTCTCC
. : . : . : . : . : . :
JMSF027D01- GATTGCCTCCCCGCCTACGTCGCAGGCGACAACTCAGACATCGTCGCCACCGATACCATG
JMSF039K21- GATTGCCTCCCCGCCTACGTCGCAGGCGACAACTCAGACATCGTCGCCACCGATACCATG
JMSF046G24- GATTGCCTCCCCGCCTACGTCGCAGGCGACAACTCAGACATCGTCGCCACCGATACCATG
____________________________________________________________
consensus GATTGCCTCCCCGCCTACGTCGCAGGCGACAACTCAGACATCGTCGCCACCGATACCATG
. : . : . : . : . : . :
JMSF027D01- AAGAACACCGTATATGCTAAGGCCAAGGAATGTTCCCAGCGACTCCCAGTGGAGGAATTT
JMSF039K21- AAGAACACCGTATATGCTAAGGCCAAGGAATGTTCCCAGCGACTCCCAGTGGAGGAATTT
JMSF046G24- AAGAACACCGTATATGCTAAGGCCAAGGAATGTTCCCAGCGACTCCCAGTGGAGGAATTT
____________________________________________________________
consensus AAGAACACCGTATATGCTAAGGCCAAGGAATGTTCCCAGCGACTCCCAGTGGAGGAATTT
. : . : . : . : . : . :
JMSF027D01- GCTATTGAACTTGCCAAGCACTTCACTTCATATTATAAGCAGGTCACTGCTGCAATCATC
JMSF039K21- GCTATTGAACTTGCCAAGCACTTCACTTCATATTATAAGCAGGTCACTGCTGCAATCATC
JMSF046G24- GCTATTGAACTTGCCAAGCACTTCACTTCATATTATAAGCAGGTCACTGCTGCAATCATC
rJMSF046G24+ GCAATCATC
rJMSF039K21+ AACTTGCCAAGCACTTCACTTCATATTATAAGCAGGTCACTGCTGCAATCATC
____________________________________________________________
consensus GCTATTGAACTTGCCAAGCACTTCACTTCATATTATAAGCAGGTCACTGCTGCAATCATC
. : . : . : . : . : . :
JMSF027D01- AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
JMSF039K21- AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
JMSF046G24- AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
rJMSF046G24+ AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
rJMSF039K21+ AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
____________________________________________________________
consensus AGGATAGTAGAAAAGCCATGGGAGCGTGTTAACATAAATGGTCGGCCACATGCACATGGT
. : . : . : . : . : . :
JMSF027D01- TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
JMSF039K21- TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
JMSF046G24- TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
rJMSF046G24+ TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
rJMSF039K21+ TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
____________________________________________________________
consensus TTTAAGCTTGGGTCTGAAAAGCATACTACTGAAGTCTTCCTGGAGAAATCAGGCGTGTTG
. : . : . : . : . : . :
JMSF027D01- CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
JMSF039K21- CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
JMSF046G24- CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
rJMSF046G24+ CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
rJMSF039K21+ CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
rJMSF027D01+ GGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
____________________________________________________________
consensus CAGGTTACCTCTGGTATTGAGGGATTGGCAGTGCTGAAGACAACAAAGTCAGGTTTTGAA
. : . : . : . : . : . :
JMSF027D01- GGGTTCATAAGGGACAAGTACACTATGTTGCCTG
JMSF039K21- GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
JMSF046G24- GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
rJMSF046G24+ GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
rJMSF039K21+ GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
rJMSF027D01+ GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
____________________________________________________________
consensus GGGTTCATAAGGGACAAGTACACTATGTTGCCTGAAACACAGGAGAGGATGCTGGCAACA
. : . : . : . : . : . :
JMSF039K21- GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
JMSF046G24- GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
rJMSF046G24+ GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
rJMSF039K21+ GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
rJMSF027D01+ GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
____________________________________________________________
consensus GAGATCACAGCATTATGGAGGTATTCCTTCAAATCTCTCTCAAGTGTTCCTATGAAGAAC
. : . : . : . : . : . :
JMSF039K21- CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
JMSF046G24- CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
rJMSF046G24+ CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
rJMSF039K21+ CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
rJMSF027D01+ CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
____________________________________________________________
consensus CATTATTTCGCAGAGATGTATATGGATGTGAAAAAGGTTCTGCTGCATACTTTCTTTGGC
. : . : . : . : . : . :
JMSF039K21- TGTCCTAAA
JMSF046G24- TGTCCTAAAGAAGGTGTATACAGTCCATCTGTCCAAAGTACACTCTATGACATGGCAAAG
rJMSF046G24+ TGTCCTAAAGAAGGTGTATACAGTCCATCTGTCCAAAGTACACTCTATGACATGGCAAAG
rJMSF039K21+ TGTCCTAAAGAAGGTGTATACAGTCCATCTGTCCAAAGTACACTCTATGACATGGCAAAG
rJMSF027D01+ TGTCCTAAAGAAGGTGTATACAGTCCATCTGTCCAAAGTACACTCTATGACATGGCAAAG
____________________________________________________________
consensus TGTCCTAAAGAAGGTGTATACAGTCCATCTGTCCAAAGTACACTCTATGACATGGCAAAG
. : . : . : . : . : . :
JMSF046G24- GCGGCTCTTGGCAGGTTTC
rJMSF046G24+ GCGGCTCTTGGCAGGTTTCCTGACTTAGTATCAATCCAATTAAAGATGCCAAATCTTCAT
rJMSF039K21+ GCGGCTCTTGGCAGGTTTCCTGACTTAGTATCAATCCAATTAAAGATGCCAAATCTTCAT
rJMSF027D01+ GCGGCTCTTGGCAGGTTTCCTGACTTAGTATCAATCCAATTAAAGATGCCAAATCTTCAT
____________________________________________________________
consensus GCGGCTCTTGGCAGGTTTCCTGACTTAGTATCAATCCAATTAAAGATGCCAAATCTTCAT
. : . : . : . : . : . :
rJMSF046G24+ TTTCTACCTGTGAACCTGTCAGGCAAAGACAATCCTGCCATTGTCAAGTTTGGTGACGAT
rJMSF039K21+ TTTCTACCTGTGAACCTGTCAGGCAAAGACAATCCTGCCATTGTCAAGTTTGGTGACGAT
rJMSF027D01+ TTTCTACCTGTGAACCTGTCAGGCAAAGACAATCCTGCCATTGTCAAGTTTGGTGACGAT
____________________________________________________________
consensus TTTCTACCTGTGAACCTGTCAGGCAAAGACAATCCTGCCATTGTCAAGTTTGGTGACGAT
. : . : . : . : . : . :
rJMSF046G24+ GTGTATTTACCAACGGATGAACCACATGGGTCAATTGAGGCAACTCTGAGCCGCGTCCAG
rJMSF039K21+ GTGTATTTACCAACGGATGAACCACATGGGTCAATTGAGGCAACTCTGAGCCGCGTCCAG
rJMSF027D01+ GTGTATTTACCAACGGATGAACCACATGGGTCAATTGAGGCAACTCTGAGCCGCGTCCAG
____________________________________________________________
consensus GTGTATTTACCAACGGATGAACCACATGGGTCAATTGAGGCAACTCTGAGCCGCGTCCAG
. : . : . : . : . : . :
rJMSF046G24+ TCGAAGATTTGAATAGGTTATAATCAAAGGTGGCTGCAAGAGTCTGCTAATTTACTTTAT
rJMSF039K21+ TCGAAGATTTGAATAGGTTATAATCAAAGGTGGCTGCAAGAGTCTGCTAATTTACTTTAT
rJMSF027D01+ TCGAAGATTTGAATAGGTTATAATCAAAGGTGGCTGCAAGAGTCTGCTAATTTACTTTAT
____________________________________________________________
consensus TCGAAGATTTGAATAGGTTATAATCAAAGGTGGCTGCAAGAGTCTGCTAATTTACTTTAT
. : . : . : . : . : . :
rJMSF046G24+ AATTATAATACCCTTCCGTGTCCTCTGAAACAATTGCAAGCTGAAATCTGTGTTGACTTG
rJMSF039K21+ AATTATAATACCCTTCCGTGTCCTCTGAAACAATTGCAAGCTGAAATCTGTGTTGACTTG
rJMSF027D01+ AATTATAATACCCTTCCGTGTCCTCTGAAACAATTGCAAGCTGAAATCTGTGTTGACTTG
____________________________________________________________
consensus AATTATAATACCCTTCCGTGTCCTCTGAAACAATTGCAAGCTGAAATCTGTGTTGACTTG
. : . : . : . : . : . :
rJMSF046G24+ TTTATGACATGATGCACTTGTTAATATGG
rJMSF039K21+ TTTATGACATGATGCACTTGTTAATATGGTGAATAAAGCTGCTGTAATTTGTAGGGTTTT
rJMSF027D01+ TTTATGACATGATGCACTTGTTAATATGGTGAATAAAGCTGCTGTAATTTGTAGGGTTTT
____________________________________________________________
consensus TTTATGACATGATGCACTTGTTAATATGGTGAATAAAGCTGCTGTAATTTGTAGGGTTTT
. : . : . : . : . : . :
rJMSF039K21+ T
rJMSF027D01+ TTTCCCCCCATAATATGGAAGTTGCACTAGTGTTCAGATTGCTACTTCACTGCAAACACG
____________________________________________________________
consensus TTTCCCCCCATAATATGGAAGTTGCACTAGTGTTCAGATTGCTACTTCACTGCAAACACG