Contig 013987:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS062B02Sequence485013987 (2)ref|XP_009797607.1|1e-17PREDICTED: heptahelical transmembrane protein 4-like isoform X4 [Nicotiana sylv
JMSF026P13Sequence688006550 (4)emb|CDP02615.1|2e-61unnamed protein product [Coffea canephora]708013987 (2)emb|CDP02615.1|2e-86unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS062B02+                                             AACTGAAATATTAACGATTTATTATT
                      ____________________________________________________________
consensus                                               AACTGAAATATTAACGATTTATTATT
 
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JMFS062B02+           ATTGAAGTATTCATTTTTACACATTTTAGGCAATGCCTTATAAATAGAAGTACCTATTAA
rJMSF026P13-                      ATTTTTACACATTTTAGGCAATGCCTTATAAATAGAAGTACCTATTAA
                      ____________________________________________________________
consensus             ATTGAAGTATTCATTTTTACACATTTTAGGCAATGCCTTATAAATAGAAGTACCTATTAA
 
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JMFS062B02+           AATACTTGCATTTCCTGTTTTATTTGCCTAATGAAGGTCTAAAAGAAAATGCACAATGTT
rJMSF026P13-          AATACTTGCATTTCCTGTTTTATTTGCCTAATGAAGGTCTAAAAGAAAATGCACAATGTT
                      ____________________________________________________________
consensus             AATACTTGCATTTCCTGTTTTATTTGCCTAATGAAGGTCTAAAAGAAAATGCACAATGTT
 
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JMFS062B02+           TTACTTTACAACGCCTATCAAGACAGTGAGACACGGTAAGTCTTTACACCTTACACCCAC
rJMSF026P13-          TTACTTTACAACGCCTATCAAGACAGTGAGACACGGTAAGTCTTTACACCTTACACCCAC
                      ____________________________________________________________
consensus             TTACTTTACAACGCCTATCAAGACAGTGAGACACGGTAAGTCTTTACACCTTACACCCAC
 
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JMFS062B02+           CATCATCATCTAACTCAAATTATTCAATAGGAATGGGACCATATACAGTCATCCTTACAG
rJMSF026P13-          CATCATCATCTAACTCAAATTATTCAATAGGAATGGGACCATATACAGTCATCCTTACAG
                      ____________________________________________________________
consensus             CATCATCATCTAACTCAAATTATTCAATAGGAATGGGACCATATACAGTCATCCTTACAG
 
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JMFS062B02+           CATTTAGATAAAGAAATCATGGCCATTTCTAACCTTTTCTTTCCCAGTTAACATCAGCAT
rJMSF026P13-          CATTTAGATAAAGAAATCATGGCCATTTCTAACCTTTTCTTTCCCAGTTAACATCAGCAT
                      ____________________________________________________________
consensus             CATTTAGATAAAGAAATCATGGCCATTTCTAACCTTTTCTTTCCCAGTTAACATCAGCAT
 
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JMFS062B02+           CCTTGCATGTCTCGCCATTTGAGGTAAACTAACCCTGCACGGTAATGGG           
rJMSF026P13-          CCTTGCATGTCTCGCCATTTGAGGTAAACTAACCCTGCACGGTAATGGGTGTAAGCCCCT
                      ____________________________________________________________
consensus             CCTTGCATGTCTCGCCATTTGAGGTAAACTAACCCTGCACGGTAATGGGTGTAAGCCCCT
 
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rJMSF026P13-          GCCACCACCAGTACGTGGAAGAGCTGGTGGCTGTGCCCGGCGATGTCAAACTTCCCGGGC
                      ____________________________________________________________
consensus             GCCACCACCAGTACGTGGAAGAGCTGGTGGCTGTGCCCGGCGATGTCAAACTTCCCGGGC
 
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rJMSF026P13-          ATCCATCGCTCTGGGATGCGCAAGGCATAGACCAAGGCTCCTATCCCGTAAAATACTCCC
                      ____________________________________________________________
consensus             ATCCATCGCTCTGGGATGCGCAAGGCATAGACCAAGGCTCCTATCCCGTAAAATACTCCC
 
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rJMSF026P13-          ATCAGGACTTCGTATCCTGTTGTGTGAAGTGCCTCGGGCTGGTTCCAGTATAAAATGAGC
                      ____________________________________________________________
consensus             ATCAGGACTTCGTATCCTGTTGTGTGAAGTGCCTCGGGCTGGTTCCAGTATAAAATGAGC
 
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rJMSF026P13-          TTGTGTAAGATTGGCGCTACGCCTGATACGCCCATGGTGAAGAACAATGCAGCACGGAAG
                      ____________________________________________________________
consensus             TTGTGTAAGATTGGCGCTACGCCTGATACGCCCATGGTGAAGAACAATGCAGCACGGAAG
 
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rJMSF026P13-          GTGCGGTATTCTGGGTTCTGGAAGACTGGGAGAAGGGAAACCAGGATTGTGCCGATTCCT
                      ____________________________________________________________
consensus             GTGCGGTATTCTGGGTTCTGGAAGACTGGGAGAAGGGAAACCAGGATTGTGCCGATTCCT
 
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rJMSF026P13-          AGGAGGGTGATGAATCCCAGATAGAGGTTGCAGAAGAAGGGGTAGCACATGAAGGAATAG
                      ____________________________________________________________
consensus             AGGAGGGTGATGAATCCCAGATAGAGGTTGCAGAAGAAGGGGTAGCACATGAAGGAATAG