Contig 013984:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026I21Sequence663013984 (2)541013984 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026I21- GA
                      ____________________________________________________________
consensus GA
 
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JMSF026I21- GCTACTACTAGATTCAAGTAAGGCCAGGCTTAAACTGGAGATAATGGAGAGAGTTCCAAC
                      ____________________________________________________________
consensus GCTACTACTAGATTCAAGTAAGGCCAGGCTTAAACTGGAGATAATGGAGAGAGTTCCAAC
 
. : . : . : . : . : . :
JMSF026I21- CAAGATAGCTGTCTTCCTAGCTCTTTTCATGGCTGCATCTTGTTAGTTCAATTCTATCTC
                      ____________________________________________________________
consensus CAAGATAGCTGTCTTCCTAGCTCTTTTCATGGCTGCATCTTGTTAGTTCAATTCTATCTC
 
. : . : . : . : . : . :
JMSF026I21- TCTCTTCCTCTATATCATATTGATATCAATATTAATTAATAAAAATGATGTGTTTTAATT
                      ____________________________________________________________
consensus TCTCTTCCTCTATATCATATTGATATCAATATTAATTAATAAAAATGATGTGTTTTAATT
 
. : . : . : . : . : . :
JMSF026I21- TATTATGTATGTGTTGCAGTGTTGCCGTCAAGTCTGACGGCACAAATAACCGTAGGACCA
                      ____________________________________________________________
consensus TATTATGTATGTGTTGCAGTGTTGCCGTCAAGTCTGACGGCACAAATAACCGTAGGACCA
 
. : . : . : . : . : . :
JMSF026I21- AACAAGAAGCAGTTGTTCATGACTGGGCAGCTTTGCAAGTCTCACCATGACTGTAAAGCT
                      ____________________________________________________________
consensus AACAAGAAGCAGTTGTTCATGACTGGGCAGCTTTGCAAGTCTCACCATGACTGTAAAGCT
 
. : . : . : . : . : . :
JMSF026I21- AACACCGTTTACTCTACCAATTTCTGCATCAACAAAATCTCTGGATCTCAAGTCGGTCAT
                      ____________________________________________________________
consensus AACACCGTTTACTCTACCAATTTCTGCATCAACAAAATCTCTGGATCTCAAGTCGGTCAT
 
. : . : . : . : . : . :
JMSF026I21- TGTGCTGGAGTTGGTCCCACTTTGGGTGGTATGTAATTCTTTAGCTTCAACTTTTCAAAT
                      ____________________________________________________________
consensus TGTGCTGGAGTTGGTCCCACTTTGGGTGGTATGTAATTCTTTAGCTTCAACTTTTCAAAT
 
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JMSF026I21- TGGGTTAGAGTTACAGAGACTAGTTAGGATCAAACGCTTATTAATTCGTTAAAAAATATA
rJMSF026I21+ A
                      ____________________________________________________________
consensus TGGGTTAGAGTTACAGAGACTAGTTAGGATCAAACGCTTATTAATTCGTTAAAAAATATA
 
. : . : . : . : . : . :
JMSF026I21- ACTTACAGCTAAAGACGTAAAGAGATAGGATACTGATTCTTCATGGGTTTTGGTGCAATA
rJMSF026I21+ ACTTACAGCTAAAGACGTAAAGAGATAGGATACTGATTCTTCATGGGTTTTGGTGCAATA
                      ____________________________________________________________
consensus ACTTACAGCTAAAGACGTAAAGAGATAGGATACTGATTCTTCATGGGTTTTGGTGCAATA
 
. : . : . : . : . : . :
JMSF026I21- ACCACCTTCCACCACCATGCTAGTTGCTCTAATATCAGTTGTTATTATAGTTGCTCTAAT
rJMSF026I21+ ACCACCTTCCACCACCATGCTAGTTGCTCTAATATCAGTTGTTATTATAGTTGCTCTAAT
                      ____________________________________________________________
consensus ACCACCTTCCACCACCATGCTAGTTGCTCTAATATCAGTTGTTATTATAGTTGCTCTAAT
 
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JMSF026I21- ATCAGTTGTTATTATAATTTTAAGACGGGTTTAATTAACTGGTTCAATAGATCATATTTA
rJMSF026I21+ ATCAGTTGTTATTATAATTTTAAGACGGGTTTAATTAACTGGTTCAATAGATCATATTTA
                      ____________________________________________________________
consensus ATCAGTTGTTATTATAATTTTAAGACGGGTTTAATTAACTGGTTCAATAGATCATATTTA
 
. : . : . : . : . : . :
JMSF026I21- A
rJMSF026I21+ AAAGAAAAGACTAAGATTTGAAATTCGACACTGACAAGGTGAGGATTAATTATATTTAAA
                      ____________________________________________________________
consensus AAAGAAAAGACTAAGATTTGAAATTCGACACTGACAAGGTGAGGATTAATTATATTTAAA
 
. : . : . : . : . : . :
rJMSF026I21+ ATAAGTATATATCTTGTGTGCACGAGCAATTAGCCCTGTTTACTGAGTCACTGAGAATAT
                      ____________________________________________________________
consensus ATAAGTATATATCTTGTGTGCACGAGCAATTAGCCCTGTTTACTGAGTCACTGAGAATAT
 
. : . : . : . : . : . :
rJMSF026I21+ GATAATATAATATAATATGGTGTACTTGATTTTTGGTAGGTATGGCATCGACAACAGAGG
                      ____________________________________________________________
consensus GATAATATAATATAATATGGTGTACTTGATTTTTGGTAGGTATGGCATCGACAACAGAGG
 
. : . : . : . : . : . :
rJMSF026I21+ ACAAGAAAACAAAACCGAAAGGTGGGTGTGGGAAATGTAAAACCGACGCCGATTGCAGAG
                      ____________________________________________________________
consensus ACAAGAAAACAAAACCGAAAGGTGGGTGTGGGAAATGTAAAACCGACGCCGATTGCAGAG
 
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rJMSF026I21+ GCTGTCCAGCAGCAGCCGCTTGCGAGAAAATAATTTTACCCGGCATATGTGCGTGATCTA
                      ____________________________________________________________
consensus GCTGTCCAGCAGCAGCCGCTTGCGAGAAAATAATTTTACCCGGCATATGTGCGTGATCTA
 
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rJMSF026I21+ CTGCAATGCTATTTCAATTCCCCAGTGATAAAGACTAATCATATGTACTCTTAAGAGTTC
                      ____________________________________________________________
consensus CTGCAATGCTATTTCAATTCCCCAGTGATAAAGACTAATCATATGTACTCTTAAGAGTTC