Contig 013982:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024E17+                                                                TTTGTC
rJMSF026D15+                                                                    TC
                      ____________________________________________________________
consensus                                                                   TTTGTC
 
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rJMSF024E17+          CAAAATGGAAGATATGGGCATTCGATCTGCCATCGTATTTGTTTCCACATGCAGGACTTG
rJMSF026D15+          CAAAATGGAAGATATGGNCATTCGATCTGCCATCGTATTTG-TTCCACATGCAGGACTTG
                      ____________________________________________________________
consensus             CAAAATGGAAGATATGGGCATTCGATCTGCCATCGTATTTGTTTCCACATGCAGGACTTG
 
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rJMSF024E17+          CCATTTTTTAAGCTTGTTATTGGAAGAACTTGATCTGGAAGCTGCTGCATTGCACTCGTT
rJMSF026D15+          CCATTTTTTAAGCTTGTTATTGGAAGAACCTGATCTGGAAGCTGCTGCATTGCACTCGTT
                      ____________________________________________________________
consensus             CCATTTTTTAAGCTTGTTATTGGAAGAACTTGATCTGGAAGCTGCTGCATTGCACTCGTT
 
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rJMSF024E17+          CAAGTCTCAGTCTTTGAGGCTCTCTGCACTTCATAAATTCAAATCTGGGAAGGTCCCTAT
rJMSF026D15+          CAAGTCTCAGTCTTTGAGGCTCTCTGCACTTCATAAATTCAAATCTGGGAAGGTCCCTAT
                      ____________________________________________________________
consensus             CAAGTCTCAGTCTTTGAGGCTCTCTGCACTTCATAAATTCAAATCTGGGAAGGTCCCTAT
 
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rJMSF024E17+          CTTACTCGCAACTGATGTTGCCAGCCGTGGTTTAGACATTCCAACAGTTGATCTAGTGAT
rJMSF026D15+          CTTACTCGCAACTGATGTTGCCAGCCGTGGTTTAGACATTCCAACAGTTGATCTAGTGAT
                      ____________________________________________________________
consensus             CTTACTCGCAACTGATGTTGCCAGCCGTGGTTTAGACATTCCAACAGTTGATCTAGTGAT
 
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rJMSF024E17+          AAATTATGATCTCCCAAGGTATCCACGCGATTATGTTCATCGTGTTGGTAGAACTGCAAG
rJMSF026D15+          AAATTATGATCTCCCAAGGTATCCACGCGATTATGTTCATCGTGTTGGTAGAACTGCAAG
                      ____________________________________________________________
consensus             AAATTATGATCTCCCAAGGTATCCACGCGATTATGTTCATCGTGTTGGTAGAACTGCAAG
 
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rJMSF024E17+          AGCAGGTAGAGGAGGGCTTGCTGCTAGTATAGTTACAGAGTATGATGTGGAACTACTTCA
rJMSF026D15+          AGCAGGTAGAGGAGGGCTTGCTGCTAGTATAGTTACAGAGTATGATGTGGAACTACTTCA
                      ____________________________________________________________
consensus             AGCAGGTAGAGGAGGGCTTGCTGCTAGTATAGTTACAGAGTATGATGTGGAACTACTTCA
 
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rJMSF024E17+          TGAAATAGAAGCTGTCCTTGGCAAACAATTGGAGGAGTTTGAATGCAAGGACAAAGATTC
rJMSF026D15+          TGAAATAGAAGCTGTCCTTGGCAAACAATTGGAGGAGTTTGAATGCAAGGACAAAGATTC
                      ____________________________________________________________
consensus             TGAAATAGAAGCTGTCCTTGGCAAACAATTGGAGGAGTTTGAATGCAAGGACAAAGATTC
 
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rJMSF024E17+          TAATGATAATATCACAAAGGTCTTCAAGGCTAGGCGTGTAGCAATAATGAAGATGATGGA
rJMSF026D15+          TAATGATAATATCACAAAGGTCTTCAAGGCTAGGCGTGTAGCAATAATGAAGATGATGGA
                      ____________________________________________________________
consensus             TAATGATAATATCACAAAGGTCTTCAAGGCTAGGCGTGTAGCAATAATGAAGATGATGGA
 
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rJMSF024E17+          CGATGGGTTTGAGGAGAAAGCAAAATCCCGAAAAGCTCAGAAACTTAAGATGCTAGAAGA
rJMSF026D15+          CGATGGGTTTGAGGAGAAAGCAAAATCCCGAAAAGCTCAGAAACTTAAGATGCTAGAAGA
                      ____________________________________________________________
consensus             CGATGGGTTTGAGGAGAAAGCAAAATCCCGAAAAGCTCAGAAACTTAAGATGCTAGAAGA
 
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rJMSF024E17+          GAAAGGTTTGTTAAAGAACAAAAAGCGAAAGAGAGATAGAACTGGTATTCACTAGAAGAA
rJMSF026D15+          GAAAGGTTTGTTAAAGAACAAAAAGCGAAAGAGAGATAGAACTGGTATGCACTAGAAGAA
                      ____________________________________________________________
consensus             GAAAGGTTTGTTAAAGAACAAAAAGCGAAAGAGAGATAGAACTGGTATTCACTAGAAGAA
 
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rJMSF024E17+          TGAATGCTTATAAAGGCAAGCAGAATGGCAATATCTTTTTCCTTTTGATTTTCTTTATTA
rJMSF026D15+          TGAATGCTTATAAAGGCAAGCAGAATGGCAATATCTTTTTCCTTTTGATTTTCTTTATTA
                      ____________________________________________________________
consensus             TGAATGCTTATAAAGGCAAGCAGAATGGCAATATCTTTTTCCTTTTGATTTTCTTTATTA
 
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rJMSF024E17+          TAATTTTTGTTGTATTTTTGTTTCTTAGTCTACATCATAATTTCATTGTAGCTCATAGAA
rJMSF026D15+          TAATTTTTGTTGTATTTTTGTTTCTTAGTCTACATCATAATTTCATTGTAGCTCATAGAA
                      ____________________________________________________________
consensus             TAATTTTTGTTGTATTTTTGTTTCTTAGTCTACATCATAATTTCATTGTAGCTCATAGAA
 
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rJMSF024E17+          TGAC                                                        
rJMSF026D15+          TGACATAGTGACATACTGCATCAAGAAAATTCATTTACATTGTTAACTTGAGGAAGACAC
                      ____________________________________________________________
consensus             TGACATAGTGACATACTGCATCAAGAAAATTCATTTACATTGTTAACTTGAGGAAGACAC