| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF025O16 | Sequence | 680 | 005110 (3) | ref|XP_009782539.1| | 6e-108 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like | 767 | 013980 (3) | ref|XP_009782540.1| | 9e-111 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like |
| JMSF026O16 | Sequence | 211 | 005110 (3) | ref|XP_009782539.1| | 2e-34 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like | 718 | 013980 (3) | ref|XP_009782540.1| | 4e-101 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like |
| JMSF050H08 | Sequence | 673 | 005110 (3) | ref|XP_009782539.1| | 5e-72 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like | 806 | 013980 (3) | ref|XP_009782540.1| | 3e-103 | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like |
This contig is upended
. : . : . : . : . : . :
rJMSF050H08+ TGCCAGCGGTCTATAGCAGTATCAGAAGA
____________________________________________________________
consensus TGCCAGCGGTCTATAGCAGTATCAGAAGA
. : . : . : . : . : . :
rJMSF026O16+ GTATAGCGGATGAGGTGCAGTCAGG-TTTGGTCGGACAGGAAGCCATT
rJMSF050H08+ GCGGGAGNCNTTGTATAGCGGATGAGGTGCAGTCAGG-TTTGGTCGGACAGGAAGCCA-T
rJMSF025O16+ GTATAGCGGATGAGGTGCAGTCAGGTTTTGGTCGGACAGGAAGCCA-T
____________________________________________________________
consensus GCGGGAGNCNTTGTATAGCGGATGAGGTGCAGTCAGG-TTTGGTCGGACAGGAAGCCA-T
. : . : . : . : . : . :
rJMSF026O16+ TTTTGGGGATTCGAGGCCCATGGAGTNGTGCCTGATATTGTTACCATGGCAAAGGGAATT
rJMSF050H08+ TTTTGGGGATTCGAGGCCCATGGAGTTGTGCCTGATATTGTTACCATGGCAAAGGGAATT
rJMSF025O16+ TTTTGGGGATTCGAGGCCCATGGAGTTGTGCCTGATATTGTTACCATGGCAAAGGGAATT
____________________________________________________________
consensus TTTTGGGGATTCGAGGCCCATGGAGTTGTGCCTGATATTGTTACCATGGCAAAGGGAATT
. : . : . : . : . : . :
rJMSF026O16+ NGAAACGGCNTTCCACTTGGTGCTGTTGTCACTACTCCCGACATTGCAAAAGTCTTAACA
rJMSF050H08+ GGAAACGGCATTCCACTTGGTGCTGTTGTCACTACTCCCGACATTGCAAAAGTCTTAACA
rJMSF025O16+ GGAAACGGCATTCCACTTGGTGCTGTTGTCACTACTCCCGACATTGCAAAAGTCTTAACA
____________________________________________________________
consensus GGAAACGGCATTCCACTTGGTGCTGTTGTCACTACTCCCGACATTGCAAAAGTCTTAACA
. : . : . : . : . : . :
rJMSF026O16+ AATCGCACTTATTTCAATACCTTTGGTGGGAATCCCGTGTGCACAGCAGGCGGCCTAGCT
rJMSF050H08+ AATCGCACTTATTTCAATACCTTTGGTGGGAATCCCGTGTGCACAGCAGGCGGCCTAGCT
rJMSF025O16+ AATCGCACTTATTTCAATACCTTTGGTGGGAATCCCGTGTGCACAGCAGGCGGCCTAGCT
____________________________________________________________
consensus AATCGCACTTATTTCAATACCTTTGGTGGGAATCCCGTGTGCACAGCAGGCGGCCTAGCT
. : . : . : . : . : . :
rJMSF026O16+ GTTCTTAAAGTGTTAGAAAAAGAGAAGCTCCAACAGAACGCGCTCACTGTGGGATCATAT
rJMSF050H08+ GTTCTTAAAGTGTTAGAAAAAGAGAAGCTCCAACAGAACGCGCTCACTGTGGGATCATAT
rJMSF025O16+ GTTCTTAAAGTGTTAGAAAAAGAGAAGCTCCAACAGAACGCGCTCACTGTGGGATCATAT
____________________________________________________________
consensus GTTCTTAAAGTGTTAGAAAAAGAGAAGCTCCAACAGAACGCGCTCACTGTGGGATCATAT
. : . : . : . : . : . :
rJMSF026O16+ CTCAAAGAGCGTCTCGTTTCACTAATGGAGAAGCATGAAATTATNGGCGATGTAAGGGGA
rJMSF050H08+ CTCAAAGAGCGTCTCGTTTCACTAATGGAGAAGCATGAAATTATTGGCGATGTAAGGGGA
rJMSF025O16+ CTCAAAGAGCGTCTCGTTTCACTAATGGAGAAGCATGAAATTATTGGCGATGTAAGGGGA
____________________________________________________________
consensus CTCAAAGAGCGTCTCGTTTCACTAATGGAGAAGCATGAAATTATTGGCGATGTAAGGGGA
. : . : . : . : . : . :
rJMSF026O16+ CGAGGCTTCATGCTAGGAGTTGAACTTGTGACTGACAGGAAGGCAAAAACTCCAGCAAAG
rJMSF050H08+ CGAGGCTTCATGCTAGGAGTTGAACTTGTGACTGACAGGAAGGCAAAAACTCCAGCAAAG
rJMSF025O16+ CGAGGCTTCATGCTAGGAGTTGAACTTGTGACTGACAGGAAGGCAAAAACTCCAGCAAAG
____________________________________________________________
consensus CGAGGCTTCATGCTAGGAGTTGAACTTGTGACTGACAGGAAGGCAAAAACTCCAGCAAAG
. : . : . : . : . : . :
rJMSF026O16+ GTTGAAATAGTTCATCTAATGGAACAGATGAAAGAAATGGGAGTACTGATAGGGAAAGGT
rJMSF050H08+ GTTGAAATAGTTCATCTAATGGAACAGATGAAAGAAATGGGAGTACTGATAGGGAAAGGT
rJMSF025O16+ GTTGAAATAGTTCATCTAATGGAACAGATGAAAGAAATGGGAGTACTGATAGGGAAAGGT
____________________________________________________________
consensus GTTGAAATAGTTCATCTAATGGAACAGATGAAAGAAATGGGAGTACTGATAGGGAAAGGT
. : . : . : . : . : . :
rJMSF026O16+ GGATTCTTTGGTAACGTTTTCAGAATCACTCCACCGCTCTGCTTCACCAAGGAAGATGCA
rJMSF050H08+ GGATTCTTTGGTAACGTTTTCAGAATCACTCCACCGCTCTGCTTCACCAAGGAAGATGCA
rJMSF025O16+ GGATTCTTTGGTAACGTTTTCAGAATCACTCCACCGCTCTGCTTCACCAAGGAAGATGCA
____________________________________________________________
consensus GGATTCTTTGGTAACGTTTTCAGAATCACTCCACCGCTCTGCTTCACCAAGGAAGATGCA
. : . : . : . : . : . :
rJMSF026O16+ GATTTCCTTGTGGATGTCATGGATTACAACATGTCAAAGCTGTGAAGCGGGGGCGATAAA
rJMSF050H08+ GATTTCCTTGTGGATGTCATGGATTACAACATGTCAAAGCTGTGAAGCGGGGGCGATAAA
rJMSF025O16+ GATTTCCTTGTGGATGTCATGGATTACAACATGTCAAAGCTGTGAAGCGGGGGCGATAAA
____________________________________________________________
consensus GATTTCCTTGTGGATGTCATGGATTACAACATGTCAAAGCTGTGAAGCGGGGGCGATAAA
. : . : . : . : . : . :
rJMSF026O16+ GAAGGGATCTTTCTACTTGTGAAACGAAGGTGNTCACTGTCTGGCACATATTGTTGTATG
rJMSF050H08+ GAAGGGATCTTTCTACTTGTGAAACGAAGGTGATCACTGTCTGGCACATATTGTTGTATG
rJMSF025O16+ GAAGGGATCTTTCTACTTGTGAAACGAAGGTGATCACTGTCTGGCACATATTGTTGTATG
____________________________________________________________
consensus GAAGGGATCTTTCTACTTGTGAAACGAAGGTGATCACTGTCTGGCACATATTGTTGTATG
. : . : . : . : . : . :
rJMSF026O16+ TTCTGTCGAACAAATAACTGCCATACATGGCAGGGAGATTGTGAGACATCACCTCGTTGT
rJMSF050H08+ TTCTGTCGAACAAATAACTGCCATACATGGCAGGGAGATTGTGAGACATCACCTCGTTGT
rJMSF025O16+ TTCTGTCGAACAAATAACTGCCATACATGGCAGGGAGATTGTGAGACATCACCTCGTTGT
____________________________________________________________
consensus TTCTGTCGAACAAATAACTGCCATACATGGCAGGGAGATTGTGAGACATCACCTCGTTGT
. : . : . : . : . : . :
rJMSF026O16+ CTCTCTTCTCC
rJMSF050H08+ CTCTCTTCTCCATCTTGTTGTGTTTCATTAAACCTGTGCTGAAATGTGATCCTG
rJMSF025O16+ CTCTCTTCTCCATCTTGTTGTGTTTCATTAAA-CTGTGCTGAAATGTGATCCTGAAAGAT
____________________________________________________________
consensus CTCTCTTCTCCATCTTGTTGTGTTTCATTAAACCTGTGCTGAAATGTGATCCTGAAAGAT