clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004B04 | Sequence | 532 | 012176 (9) | ref|XP_010544377.1| | 8e-53 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like [Tarenaya hassleria | 754 | 013977 (6) | ref|XP_006491046.1| | 1e-61 | PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Citrus sin |
JMSF025G13 | Sequence | 690 | 012176 (9) | gb|ABR13310.1| | 2e-120 | putative NAD dependent malic enzyme [Prunus dulcis] | 768 | 013977 (6) | ref|XP_006445106.1| | 2e-68 | hypothetical protein CICLE_v10019380mg [Citrus clementina] gb|ESR58346.1| hypoth |
JMSF025J07 | Sequence | 694 | 012176 (9) | gb|ABR13310.1| | 2e-120 | putative NAD dependent malic enzyme [Prunus dulcis] | 711 | 013977 (6) | ref|XP_004153716.1| | 4e-30 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like, partial [Cucumis s |
JMSF030O12 | Sequence | 685 | 013977 (6) | ref|XP_004153716.1| | 1e-29 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like, partial [Cucumis s | |||||
JMSF041N11 | Sequence | 777 | 012176 (9) | gb|KDP28665.1| | 6e-100 | hypothetical protein JCGZ_14436 [Jatropha curcas] | 610 | 013977 (6) | ref|XP_004153716.1| | 1e-45 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like, partial [Cucumis s |
JMSF048D13 | Sequence | 146 | 012176 (9) | 775 | 013977 (6) | ref|XP_004145048.1| | 8e-98 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like [Cucumis sativus] |
This contig is upended
. : . : . : . : . : . :
rJMSF048D13+ CGTGAGGGTGCAGGACTCCT
____________________________________________________________
consensus CGTGAGGGTGCAGGACTCCT
. : . : . : . : . : . :
rJMSF048D13+ TGAAGTGNTAAAAAGGTCAAGCCTCACGTGCTTCTTGGTTTGTCTGCAGTGGGTGGTCTC
____________________________________________________________
consensus TGAAGTGNTAAAAAGGTCAAGCCTCACGTGCTTCTTGGTTTGTCTGCAGTGGGTGGTCTC
. : . : . : . : . : . :
rJMSF048D13+ TTCAATGAAGAGGTGCTTAAGG-CCATGCGGGATTCAGATTCCTCTAAACCTGCTATATT
rJMFF004B04+ TTCAATGAAGAGGTGCTTAAGGCCCATGCGGGCTTCAGATTCCTCTAAACCTGCTATATT
____________________________________________________________
consensus TTCAATGAAGAGGTGCTTAAGGCCCATGCGGGCTTCAGATTCCTCTAAACCTGCTATATT
. : . : . : . : . : . :
rJMSF048D13+ TGCAATGTCAAACCCCACAAACAATGCTGAATGCACTGCTGCCGATGCTTTTAAGCATGC
rJMFF004B04+ TGCAATGTCAAACCCCACAAACAATGCTGAATGCACTGCTGCCGATGCTTTTAAGCATGC
rJMSF025G13+ ACAAACAATGCTGAATGCACTGCTGCCGATGCTTTTAAGCATGC
____________________________________________________________
consensus TGCAATGTCAAACCCCACAAACAATGCTGAATGCACTGCTGCCGATGCTTTTAAGCATGC
. : . : . : . : . : . :
rJMSF048D13+ TGGTCCAAATATTGTCTTTGGTAGCGGGAGCCCCTTTGCCAATGTTGACCTTGGGAATGG
rJMFF004B04+ TGGTCCAAATATTGTCTTTGGTAGCGGGAGCCCCTTTGCCAATGTTGACCTTGGGAATGG
rJMSF025G13+ TGGTCCAAATATTGTCTTTGGTAGCGGGAGCCCCTTTGCCAATGTTGACCTTGGGAATGG
____________________________________________________________
consensus TGGTCCAAATATTGTCTTTGGTAGCGGGAGCCCCTTTGCCAATGTTGACCTTGGGAATGG
. : . : . : . : . : . :
rJMSF048D13+ AAAAATAGGATATGTAAATCAAGCAAACAATATGTACCTCTTCCCAGGGATTGGTTTGGG
rJMFF004B04+ AAAAATAGGATATGTAAATCAAGCAAACAATATGTACCTCTTCCCAGGGATTGGTTTGGG
rJMSF041N11+ TAGGATATGTAAATCAAGCAAACAATATGTACCTCTTCCCAGGGATTGGTTTGGG
rJMSF025G13+ AAAAATAGGATATGTAAATCAAGCAAACAATATGTACCTCTTCCCAGGGATTGGTTTGGG
____________________________________________________________
consensus AAAAATAGGATATGTAAATCAAGCAAACAATATGTACCTCTTCCCAGGGATTGGTTTGGG
. : . : . : . : . : . :
rJMSF048D13+ AGCTCTTCTTTCTGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
rJMFF004B04+ AGCTCTTCTTTCTGGTGCTCGAATAATTTCTGACGACAATGTTGGAAGCTGCTGCAGAGC
rJMSF041N11+ AGCTCTTCTTTCTGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
rJMSF025G13+ AGCTCTTCTTTCTGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
rJMSF030O12+ TGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
rJMSF025J07+ TTTCTGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
____________________________________________________________
consensus AGCTCTTCTTTCTGGTGCTCGAATAATTTCTGAC-ACAATGTTGGAAGCTGCTGCAGAGC
. : . : . : . : . : . :
rJMSF048D13+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
rJMFF004B04+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
rJMSF041N11+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
rJMSF025G13+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
rJMSF030O12+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
rJMSF025J07+ GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
____________________________________________________________
consensus GCCTTGCTTCTTATATGTCAGACGAAGAAGTCCATAAGGGACTCTTATATCCATCCATCG
. : . : . : . : . : . :
rJMSF048D13+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
rJMFF004B04+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
rJMSF041N11+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
rJMSF025G13+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
rJMSF030O12+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
rJMSF025J07+ ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
____________________________________________________________
consensus ATAACATCCGGGATATTACAGCAGAGGTTGGCGCTGCTGTTCTTCGAGCAGCTGTTGCTG
. : . : . : . : . : . :
rJMSF048D13+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
rJMFF004B04+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
rJMSF041N11+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
rJMSF025G13+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
rJMSF030O12+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
rJMSF025J07+ AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
____________________________________________________________
consensus AAGAACTGGCGGAAGGACATGGCGAAGTGGGACCCAAAGATCTAGAACATATGTCAAAGG
. : . : . : . : . : . :
rJMSF048D13+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
rJMFF004B04+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
rJMSF041N11+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
rJMSF025G13+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
rJMSF030O12+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
rJMSF025J07+ AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
____________________________________________________________
consensus AGGAGACTGTTGAATATATCCGACTCAATATGTGGGACCCTATTTACAGTCCTCTTGTTC
. : . : . : . : . : . :
rJMSF048D13+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
rJMFF004B04+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
rJMSF041N11+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
rJMSF025G13+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
rJMSF030O12+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
rJMSF025J07+ ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
____________________________________________________________
consensus ACGAGACCTGAAGCACAAAGCCGTTCTTGGCTAAACTTATGCTGACCCCGGTATCTGGTT
. : . : . : . : . : . :
rJMSF048D13+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
rJMFF004B04+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
rJMSF041N11+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
rJMSF025G13+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
rJMSF030O12+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
rJMSF025J07+ AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
____________________________________________________________
consensus AGCCTGCAGGCTGCTATAATGTCGAAGTTTATCTTCGTGCACTATGTAATTGTTAGCAGA
. : . : . : . : . : . :
rJMSF048D13+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACA
rJMFF004B04+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
rJMSF041N11+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
rJMSF025G13+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
rJMSF030O12+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
rJMSF025J07+ AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
____________________________________________________________
consensus AGGTTTAATGGATGAAATTATGCACAACTAGAACACACGAGCTTATCCCGGATTCTGATA
. : . : . : . : . : . :
rJMFF004B04+ TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATA
rJMSF041N11+ TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATATGATTGGATACTCATTCTTGAACGTA
rJMSF025G13+ TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATATGATTGGATACTCATTCTTGAACGTA
rJMSF030O12+ TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATATGATTGGATACTCATTCTTGAACGTA
rJMSF025J07+ TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATATGATTGGATACTCATTCTTGAACGTA
____________________________________________________________
consensus TGGCCTCTTTTAAAGCCATTTCTTGGTCTATATATGATTGGATACTCATTCTTGAACGTA
. : . : . : . : . : . :
rJMSF041N11+ AGACCTCGGATGTCT
rJMSF025G13+ AGACCTCGGATGTCTTGTATCAAGCAGTCATCTTTGAGTGTCATAAACTGTTATGTAGTT
rJMSF030O12+ AGACCTCGGATGTCTTGTATCAAGCAGTCATCTTTGAGTGTCATAAACTGTTATGTAGTT
rJMSF025J07+ AGACCTCGGATGTCTTGTATCAAGCAGTCATCTTTGAGTGTCATAAACTGTTATGTAGTT
____________________________________________________________
consensus AGACCTCGGATGTCTTGTATCAAGCAGTCATCTTTGAGTGTCATAAACTGTTATGTAGTT
. : . : . : . : . : . :
rJMSF025G13+ CACTT
rJMSF030O12+ CACTTATGAGTGTTAGCTGAGTTGATGGCAATTCCTAAGCCGATATTGAACTATTTGGAA
rJMSF025J07+ CACTTATGAGTGTTAGCTGAGTTGATGGCAATTCCTAAGCCGATATTGAACTATTTGGAA
____________________________________________________________
consensus CACTTATGAGTGTTAGCTGAGTTGATGGCAATTCCTAAGCCGATATTGAACTATTTGGAA
. : . : . : . : . : . :
rJMSF030O12+ GAGTTGAATTGCACTGTTGAACTGGTAAAAGTTTCAAT
rJMSF025J07+ GAGTTGAATTGCACTGTTGAACTGGTAAAAGTTTCAATTAAACACTCAAACCAATGTCCA
____________________________________________________________
consensus GAGTTGAATTGCACTGTTGAACTGGTAAAAGTTTCAATTAAACACTCAAACCAATGTCCA